RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	MTC1	P47018	478 aa	Known RBP	10.83	□□□□□ -0.68
SUP35	YDR172W	DRS1	P32892	752 aa	Known RBP	10.64	□□□□□ -0.71
SUP35	YDR172W	DIP2	Q12220	943 aa	Predicted RBP	9.13	□□□□□ -0.95
SUP35	YDR172W	BFR2	Q06631	534 aa	Known RBP	9.09	□□□□□ -0.95
SUP35	YDR172W	FAP1	P53971	965 aa		9.09	□□□□□ -0.95
SUP35	YDR172W	AVT3	P36062	692 aa		8.98	□□□□□ -0.97
SUP35	YDR172W	PRI1	P10363	409 aa		8.82	□□□□□ -1
SUP35	YDR172W	ISW2	Q08773	1120 aa		8.82	□□□□□ -1
SUP35	YDR172W	RPG1	P38249	964 aa	Known RBP	8.74	□□□□□ -1.01
SUP35	YDR172W	AAD16	Q02895	342 aa		8.68	□□□□□ -1.02
SUP35	YDR172W	RSE1	Q04693	1361 aa	Known RBP	8.67	□□□□□ -1.02
SUP35	YDR172W	PRY3	P47033	881 aa		8.53	□□□□□ -1.04
SUP35	YDR172W	TFA1	P36100	482 aa		8.42	□□□□□ -1.06
SUP35	YDR172W	RPL17A	P05740	184 aa	Known RBP	8.38	□□□□□ -1.07
SUP35	YDR172W	RPL17B	P46990	184 aa	Known RBP	8.38	□□□□□ -1.07
SUP35	YDR172W	TSR3	Q12094	313 aa	Known RBP	8.37	□□□□□ -1.07
SUP35	YDR172W	SGS1	P35187	1447 aa		8.33	□□□□□ -1.08
SUP35	YDR172W	REB1	P21538	810 aa		8.26	□□□□□ -1.09
SUP35	YDR172W	INO80	P53115	1489 aa		8.25	□□□□□ -1.09
SUP35	YDR172W	TCB3	Q03640	1545 aa	Known RBP	8.18	□□□□□ -1.1
SUP35	YDR172W	YCK3	P39962	524 aa		8.16	□□□□□ -1.1
SUP35	YDR172W	MON2	P48563	1636 aa	Predicted RBP	8.15	□□□□□ -1.1
SUP35	YDR172W	TY1B-DR4	Q07793	1604 aa		8.1	□□□□□ -1.11
SUP35	YDR172W	SPT21	P35209	758 aa		8.08	□□□□□ -1.12
SUP35	YDR172W	HAA1	Q12753	694 aa	Known RBP	8.02	□□□□□ -1.12
SUP35	YDR172W	MRPL32	P25348	183 aa		8.01	□□□□□ -1.13
SUP35	YDR172W	SPA2	P23201	1466 aa	Known RBP	7.97	□□□□□ -1.13
SUP35	YDR172W	SWR1	Q05471	1514 aa		7.95	□□□□□ -1.14
SUP35	YDR172W	SSN2	P38931	1420 aa		7.94	□□□□□ -1.14
SUP35	YDR172W	HSL1	P34244	1518 aa		7.94	□□□□□ -1.14
SUP35	YDR172W	RIM101	P33400	625 aa		7.91	□□□□□ -1.14
SUP35	YDR172W	SPT6	P23615	1451 aa	Known RBP	7.91	□□□□□ -1.14
SUP35	YDR172W	YKR023W	P36119	530 aa	Known RBP	7.87	□□□□□ -1.15
SUP35	YDR172W	HIR3	P47171	1648 aa		7.79	□□□□□ -1.16
SUP35	YDR172W	CDC27	P38042	758 aa		7.75	□□□□□ -1.17
SUP35	YDR172W	DNA2	P38859	1522 aa		7.73	□□□□□ -1.17
SUP35	YDR172W	KOG1	P38873	1557 aa		7.73	□□□□□ -1.17
SUP35	YDR172W	XRN1	P22147	1528 aa	Known RBP	7.71	□□□□□ -1.18
SUP35	YDR172W	TFC8	Q12308	588 aa		7.69	□□□□□ -1.18
SUP35	YDR172W	HO	P09932	586 aa		7.69	□□□□□ -1.18
SUP35	YDR172W	OXP1	P28273	1286 aa		7.67	□□□□□ -1.18
SUP35	YDR172W	DCD1	P06773	312 aa		7.65	□□□□□ -1.18
SUP35	YDR172W	REV3	P14284	1504 aa		7.61	□□□□□ -1.19
SUP35	YDR172W	THO2	P53552	1597 aa	Known RBP	7.57	□□□□□ -1.2
SUP35	YDR172W	SIN3	P22579	1536 aa		7.56	□□□□□ -1.2
SUP35	YDR172W	BUD4	P47136	1447 aa		7.54	□□□□□ -1.2
SUP35	YDR172W	YGL015C	P33199	130 aa		7.53	□□□□□ -1.2
SUP35	YDR172W	SSK2	P53599	1579 aa		7.52	□□□□□ -1.21
SUP35	YDR172W	YIL055C	P40523	627 aa	Known RBP	7.5	□□□□□ -1.21
SUP35	YDR172W	YAH1	Q12184	172 aa	Known RBP	7.49	□□□□□ -1.21
SUP35	YDR172W	ECM5	Q03214	1411 aa		7.49	□□□□□ -1.21
SUP35	YDR172W	TAF2	P23255	1407 aa		7.48	□□□□□ -1.21
SUP35	YDR172W	PTP3	P40048	928 aa		7.47	□□□□□ -1.21
SUP35	YDR172W	ATG2	P53855	1592 aa		7.47	□□□□□ -1.21
SUP35	YDR172W	BCH2	P36122	765 aa		7.47	□□□□□ -1.21
SUP35	YDR172W	ESP1	Q03018	1630 aa		7.45	□□□□□ -1.22
SUP35	YDR172W	MYO2	P19524	1574 aa	Known RBP	7.44	□□□□□ -1.22
SUP35	YDR172W	SSP1	P38871	571 aa		7.44	□□□□□ -1.22
SUP35	YDR172W	MAP2	P38174	421 aa	Known RBP	7.43	□□□□□ -1.22
SUP35	YDR172W	UBP10	P53874	792 aa	Predicted RBP	7.43	□□□□□ -1.22
SUP35	YDR172W	MDS3	P53094	1487 aa		7.43	□□□□□ -1.22
SUP35	YDR172W	RSM7	P47150	247 aa		7.42	□□□□□ -1.22
SUP35	YDR172W	YLR271W	Q06152	274 aa		7.41	□□□□□ -1.22
SUP35	YDR172W	PEP1	P32319	1579 aa		7.4	□□□□□ -1.23
SUP35	YDR172W	SKI3	P17883	1432 aa	Known RBP	7.39	□□□□□ -1.23
SUP35	YDR172W	SCY1	P53009	804 aa		7.37	□□□□□ -1.23
SUP35	YDR172W	YPK9	Q12697	1472 aa		7.32	□□□□□ -1.24
SUP35	YDR172W	EPS1	P40557	701 aa		7.31	□□□□□ -1.24
SUP35	YDR172W	AI2	P03876	854 aa		7.31	□□□□□ -1.24
SUP35	YDR172W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.3	□□□□□ -1.24	not detected
SUP35	YDR172W	SCC2	Q04002	1493 aa		7.27	□□□□□ -1.25
SUP35	YDR172W	BDF1	P35817	686 aa		7.27	□□□□□ -1.25
SUP35	YDR172W	POL1	P13382	1468 aa		7.26	□□□□□ -1.25
SUP35	YDR172W	SLX5	P32828	619 aa	Known RBP	7.24	□□□□□ -1.25
SUP35	YDR172W	BBC1	P47068	1157 aa		7.24	□□□□□ -1.25
SUP35	YDR172W	PSD2	P53037	1138 aa	Known RBP	7.24	□□□□□ -1.25
SUP35	YDR172W	STU1	P38198	1513 aa		7.22	□□□□□ -1.25
SUP35	YDR172W	UFD4	P33202	1483 aa		7.22	□□□□□ -1.25
SUP35	YDR172W	RKR1	Q04781	1562 aa		7.22	□□□□□ -1.25
SUP35	YDR172W	RPO31	P04051	1460 aa		7.21	□□□□□ -1.25
SUP35	YDR172W	BPT1	P14772	1559 aa		7.2	□□□□□ -1.26
SUP35	YDR172W	MGA2	P40578	1113 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	TY2B-LR1	P0C2J3	1770 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	TY2B-F	P0CX63	1770 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	TY2B-GR2	P0CX64	1770 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	TY2B-C	P25384	1770 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	TY2B-DR2	Q03494	1770 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	TY1B-DR1	Q03855	1755 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	TY2B-DR3	Q07791	1770 aa	Known RBP	7.19	□□□□□ -1.26
SUP35	YDR172W	TY2B-OR1	Q12113	1770 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	TY2B-DR1	Q12472	1770 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	TY2B-OR2	Q12501	1770 aa		7.19	□□□□□ -1.26
SUP35	YDR172W	CST9	Q06032	482 aa		7.18	□□□□□ -1.26
SUP35	YDR172W	YCF1	P39109	1515 aa	Known RBP	7.17	□□□□□ -1.26
SUP35	YDR172W	YOR1	P53049	1477 aa		7.17	□□□□□ -1.26
SUP35	YDR172W	TOP2	P06786	1428 aa	Known RBP	7.16	□□□□□ -1.26
SUP35	YDR172W	TY1B-DR3	Q99231	1755 aa		7.13	□□□□□ -1.27
SUP35	YDR172W	YTA7	P40340	1379 aa		7.12	□□□□□ -1.27
SUP35	YDR172W	CHD1	P32657	1468 aa		7.12	□□□□□ -1.27
SUP35	YDR172W	TY2B-B	Q12491	1770 aa		7.11	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms