RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W MTC1P47018 478 aaKnown RBP14.49□□□□□ -0.09
LDB16YCL005W DRS1P32892 752 aaKnown RBP14□□□□□ -0.17
LDB16YCL005W FAP1P53971 965 aa13.91□□□□□ -0.18
LDB16YCL005W PRY3P47033 881 aa13.16□□□□□ -0.3
LDB16YCL005W YCK3P39962 524 aa12.43□□□□□ -0.42
LDB16YCL005W PRI1P10363 409 aa12.42□□□□□ -0.42
LDB16YCL005W AAD16Q02895 342 aa12.41□□□□□ -0.42
LDB16YCL005W HAA1Q12753 694 aaKnown RBP12.3□□□□□ -0.44
LDB16YCL005W BFR2Q06631 534 aaKnown RBP12.17□□□□□ -0.46
LDB16YCL005W ISW2Q08773 1120 aa12.12□□□□□ -0.47
LDB16YCL005W RPG1P38249 964 aaKnown RBP11.98□□□□□ -0.49
LDB16YCL005W DIP2Q12220 943 aaPredicted RBP11.9□□□□□ -0.5
LDB16YCL005W AVT3P36062 692 aa11.75□□□□□ -0.53
LDB16YCL005W TSR3Q12094 313 aaKnown RBP11.71□□□□□ -0.53
LDB16YCL005W TFA1P36100 482 aa11.53□□□□□ -0.56
LDB16YCL005W SGS1P35187 1447 aa11.51□□□□□ -0.57
LDB16YCL005W RSE1Q04693 1361 aaKnown RBP11.41□□□□□ -0.58
LDB16YCL005W INO80P53115 1489 aa11.34□□□□□ -0.59
LDB16YCL005W MRPL32P25348 183 aa11.29□□□□□ -0.6
LDB16YCL005W TCB3Q03640 1545 aaKnown RBP11.23□□□□□ -0.61
LDB16YCL005W MON2P48563 1636 aaPredicted RBP11.13□□□□□ -0.63
LDB16YCL005W TY1B-DR4Q07793 1604 aa11.09□□□□□ -0.63
LDB16YCL005W REB1P21538 810 aa11.07□□□□□ -0.64
LDB16YCL005W RPL17AP05740 184 aaKnown RBP11.06□□□□□ -0.64
LDB16YCL005W RPL17BP46990 184 aaKnown RBP11.06□□□□□ -0.64
LDB16YCL005W YGL015CP33199 130 aa11.04□□□□□ -0.64
LDB16YCL005W BUD31P25337 157 aaPredicted RBP10.99□□□□□ -0.65
LDB16YCL005W SPA2P23201 1466 aaKnown RBP10.95□□□□□ -0.66
LDB16YCL005W SSN2P38931 1420 aa10.93□□□□□ -0.66
LDB16YCL005W SWR1Q05471 1514 aa10.88□□□□□ -0.67
LDB16YCL005W HSL1P34244 1518 aa10.85□□□□□ -0.67
LDB16YCL005W SPT6P23615 1451 aaKnown RBP10.82□□□□□ -0.68
LDB16YCL005W HIR3P47171 1648 aa10.66□□□□□ -0.7
LDB16YCL005W CDC27P38042 758 aa10.61□□□□□ -0.71
LDB16YCL005W DNA2P38859 1522 aa10.59□□□□□ -0.71
LDB16YCL005W KOG1P38873 1557 aa10.57□□□□□ -0.72
LDB16YCL005W XRN1P22147 1528 aaKnown RBP10.57□□□□□ -0.72
LDB16YCL005W SPT21P35209 758 aa10.52□□□□□ -0.73
LDB16YCL005W YKR023WP36119 530 aaKnown RBP10.5□□□□□ -0.73
LDB16YCL005W REV3P14284 1504 aa10.43□□□□□ -0.74
LDB16YCL005W UBP10P53874 792 aaPredicted RBP10.4□□□□□ -0.74
LDB16YCL005W THO2P53552 1597 aaKnown RBP10.36□□□□□ -0.75
LDB16YCL005W SIN3P22579 1536 aa10.35□□□□□ -0.75
LDB16YCL005W MAP2P38174 421 aaKnown RBP10.34□□□□□ -0.75
LDB16YCL005W BUD4P47136 1447 aa10.33□□□□□ -0.76
LDB16YCL005W TFC8Q12308 588 aa10.3□□□□□ -0.76
LDB16YCL005W ECM5Q03214 1411 aa10.3□□□□□ -0.76
LDB16YCL005W HOP09932 586 aa10.29□□□□□ -0.76
LDB16YCL005W SSK2P53599 1579 aa10.28□□□□□ -0.76
LDB16YCL005W TAF2P23255 1407 aa10.27□□□□□ -0.77
LDB16YCL005W RIM101P33400 625 aa10.26□□□□□ -0.77
LDB16YCL005W DCD1P06773 312 aa10.24□□□□□ -0.77
LDB16YCL005W SIS1P25294 352 aaKnown RBP10.23□□□□□ -0.77
LDB16YCL005W ESP1Q03018 1630 aa10.22□□□□□ -0.77
LDB16YCL005W ATG2P53855 1592 aa10.21□□□□□ -0.78
LDB16YCL005W MYO2P19524 1574 aaKnown RBP10.18□□□□□ -0.78
LDB16YCL005W MDS3P53094 1487 aa10.15□□□□□ -0.78
LDB16YCL005W SKI3P17883 1432 aaKnown RBP10.15□□□□□ -0.79
LDB16YCL005W PEP1P32319 1579 aa10.13□□□□□ -0.79
LDB16YCL005W SCY1P53009 804 aa10.08□□□□□ -0.8
LDB16YCL005W YPK9Q12697 1472 aa10.05□□□□□ -0.8
LDB16YCL005W RQC2Q12532 1038 aaKnown RBP10.03□□□□□ -0.8
LDB16YCL005W TIF4632P39936 914 aaKnown RBP10□□□□□ -0.81
LDB16YCL005W SLX5P32828 619 aaKnown RBP9.98□□□□□ -0.81
LDB16YCL005W POL1P13382 1468 aa9.97□□□□□ -0.81
LDB16YCL005W SCC2Q04002 1493 aa9.97□□□□□ -0.81
LDB16YCL005W BCH2P36122 765 aa9.94□□□□□ -0.82
LDB16YCL005W PTP3P40048 928 aa9.94□□□□□ -0.82
LDB16YCL005W TGL3P40308 642 aa9.94□□□□□ -0.82
LDB16YCL005W UBP9P39967 754 aa9.92□□□□□ -0.82
LDB16YCL005W STU1P38198 1513 aa9.92□□□□□ -0.82
LDB16YCL005W RPO31P04051 1460 aa9.91□□□□□ -0.82
LDB16YCL005W OXP1P28273 1286 aa9.91□□□□□ -0.82
LDB16YCL005W UFD4P33202 1483 aa9.91□□□□□ -0.82
LDB16YCL005W RKR1Q04781 1562 aa9.89□□□□□ -0.83
LDB16YCL005W SSP1P38871 571 aa9.87□□□□□ -0.83
LDB16YCL005W BPT1P14772 1559 aa9.86□□□□□ -0.83
LDB16YCL005W YIL055CP40523 627 aaKnown RBP9.86□□□□□ -0.83
LDB16YCL005W TOP2P06786 1428 aaKnown RBP9.84□□□□□ -0.83
LDB16YCL005W YTA7P40340 1379 aa9.84□□□□□ -0.83
LDB16YCL005W YOR1P53049 1477 aa9.84□□□□□ -0.83
LDB16YCL005W TY2B-LR1P0C2J3 1770 aa9.83□□□□□ -0.84
LDB16YCL005W TY2B-FP0CX63 1770 aa9.83□□□□□ -0.84
LDB16YCL005W TY2B-GR2P0CX64 1770 aa9.83□□□□□ -0.84
LDB16YCL005W TY2B-CP25384 1770 aa9.83□□□□□ -0.84
LDB16YCL005W TY2B-DR2Q03494 1770 aa9.83□□□□□ -0.84
LDB16YCL005W TY1B-DR1Q03855 1755 aa9.83□□□□□ -0.84
LDB16YCL005W TY2B-DR3Q07791 1770 aaKnown RBP9.83□□□□□ -0.84
LDB16YCL005W TY2B-OR1Q12113 1770 aa9.83□□□□□ -0.84
LDB16YCL005W TY2B-DR1Q12472 1770 aa9.83□□□□□ -0.84
LDB16YCL005W TY2B-OR2Q12501 1770 aa9.83□□□□□ -0.84
LDB16YCL005W YCF1P39109 1515 aaKnown RBP9.83□□□□□ -0.84
LDB16YCL005W CHD1P32657 1468 aa9.81□□□□□ -0.84
LDB16YCL005W YAH1Q12184 172 aaKnown RBP9.79□□□□□ -0.84
LDB16YCL005W SMC4Q12267 1418 aa9.79□□□□□ -0.84
LDB16YCL005W TY1B-DR3Q99231 1755 aa9.77□□□□□ -0.85
LDB16YCL005W MMS22Q06164 1454 aa9.77□□□□□ -0.85
LDB16YCL005W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.76□□□□□ -0.85not detected
LDB16YCL005W MYO4P32492 1471 aa9.75□□□□□ -0.85
LDB16YCL005W TY2B-BQ12491 1770 aa9.75□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms