RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C MID1P41821 548 aa8.61□□□□□ -1.03
UME1YPL139C YLR225CQ05948 407 aaKnown RBP8.61□□□□□ -1.03
UME1YPL139C NKP2Q06162 153 aa8.61□□□□□ -1.03
UME1YPL139C LAP2Q10740 671 aa8.61□□□□□ -1.03
UME1YPL139C PRO3P32263 286 aaKnown RBP8.61□□□□□ -1.03
UME1YPL139C ERG7P38604 731 aa8.61□□□□□ -1.03
UME1YPL139C IOC3P43596 787 aa8.61□□□□□ -1.03
UME1YPL139C YJL007CP47080 104 aa8.61□□□□□ -1.03
UME1YPL139C YPL260WQ08977 551 aa8.61□□□□□ -1.03
UME1YPL139C PRE8P23639 250 aa8.6□□□□□ -1.03
UME1YPL139C CHS3P29465 1165 aa8.6□□□□□ -1.03
UME1YPL139C OCT1P35999 772 aa8.6□□□□□ -1.03
UME1YPL139C CST26P38226 397 aa8.6□□□□□ -1.03
UME1YPL139C MPH3P0CE00 602 aa8.59□□□□□ -1.03
UME1YPL139C SRM1P21827 482 aa8.59□□□□□ -1.03
UME1YPL139C KTR1P27810 393 aaKnown RBP8.59□□□□□ -1.03
UME1YPL139C SPR3P41901 512 aa8.59□□□□□ -1.03
UME1YPL139C BRE1Q07457 700 aaKnown RBP8.59□□□□□ -1.03
UME1YPL139C NPL4P33755 580 aa8.58□□□□□ -1.04
UME1YPL139C GEF1P37020 779 aa8.58□□□□□ -1.04
UME1YPL139C VID27P40157 782 aa8.58□□□□□ -1.04
UME1YPL139C NET1P47035 1189 aa8.58□□□□□ -1.04
UME1YPL139C SNU71P53207 620 aaKnown RBP8.58□□□□□ -1.04
UME1YPL139C HDA1P53973 706 aa8.58□□□□□ -1.04
UME1YPL139C SKG3Q06315 1026 aa8.58□□□□□ -1.04
UME1YPL139C TAH18Q12181 623 aa8.58□□□□□ -1.04
UME1YPL139C SPB4P25808 606 aaPredicted RBP8.57□□□□□ -1.04
UME1YPL139C YML082WQ04533 649 aaKnown RBP8.57□□□□□ -1.04
UME1YPL139C UBX5Q06682 500 aa8.57□□□□□ -1.04
UME1YPL139C SAM2P19358 384 aaKnown RBP8.56□□□□□ -1.04
UME1YPL139C RTS1P38903 757 aa8.56□□□□□ -1.04
UME1YPL139C PTK2P47116 818 aaKnown RBP8.56□□□□□ -1.04
UME1YPL139C YML037CQ03703 340 aa8.56□□□□□ -1.04
UME1YPL139C RIM20Q12033 661 aa8.56□□□□□ -1.04
UME1YPL139C CFT2Q12102 859 aaPredicted RBP8.56□□□□□ -1.04
UME1YPL139C RAS1P01119 309 aa8.55□□□□□ -1.04
UME1YPL139C ACE2P21192 770 aa8.55□□□□□ -1.04
UME1YPL139C CDC60P26637 1090 aaKnown RBP8.55□□□□□ -1.04
UME1YPL139C OSH3P38713 996 aaKnown RBP8.55□□□□□ -1.04
UME1YPL139C HAP5Q02516 242 aa8.55□□□□□ -1.04
UME1YPL139C RAD61Q99359 647 aa8.55□□□□□ -1.04
UME1YPL139C MCD4P36051 919 aa8.54□□□□□ -1.04
UME1YPL139C AAP1P37898 856 aaKnown RBP8.54□□□□□ -1.04
UME1YPL139C LYS14P40971 790 aa8.54□□□□□ -1.04
UME1YPL139C BNI4P53858 892 aa8.54□□□□□ -1.04
UME1YPL139C TUS1Q06412 1307 aa8.54□□□□□ -1.04
UME1YPL139C OPI1P21957 404 aa8.53□□□□□ -1.04
UME1YPL139C MAC1P35192 417 aa8.53□□□□□ -1.04
UME1YPL139C MYO3P36006 1272 aa8.53□□□□□ -1.04
UME1YPL139C STM1P39015 273 aaKnown RBP8.53□□□□□ -1.04
UME1YPL139C ULP1Q02724 621 aa8.53□□□□□ -1.04
UME1YPL139C MRD1Q06106 887 aaKnown RBP8.53□□□□□ -1.04
UME1YPL139C SRS2P12954 1174 aa8.52□□□□□ -1.05
UME1YPL139C UFD2P54860 961 aa8.52□□□□□ -1.05
UME1YPL139C RPS15Q01855 142 aaKnown RBP8.52□□□□□ -1.05
UME1YPL139C YPL062WQ02781 134 aa8.52□□□□□ -1.05
UME1YPL139C MET1P36150 593 aa8.51□□□□□ -1.05
UME1YPL139C FPR3P38911 411 aaKnown RBP8.51□□□□□ -1.05
UME1YPL139C SLN1P39928 1220 aaPredicted RBP8.51□□□□□ -1.05
UME1YPL139C PSF2P40359 213 aa8.51□□□□□ -1.05
UME1YPL139C MGA2P40578 1113 aa8.51□□□□□ -1.05
UME1YPL139C SUE1Q06524 206 aa8.51□□□□□ -1.05
UME1YPL139C SUB2Q07478 446 aaKnown RBP8.51□□□□□ -1.05
UME1YPL139C PGA3Q12746 312 aaKnown RBP8.51□□□□□ -1.05
UME1YPL139C RIT1P23796 513 aa8.5□□□□□ -1.05
UME1YPL139C PTC2P39966 464 aaKnown RBP8.5□□□□□ -1.05
UME1YPL139C VAB2P40003 282 aa8.5□□□□□ -1.05
UME1YPL139C ENP2P48234 707 aaKnown RBP8.5□□□□□ -1.05
UME1YPL139C DUS4Q06063 367 aa8.5□□□□□ -1.05
UME1YPL139C RAD50P12753 1312 aa8.49□□□□□ -1.05
UME1YPL139C ERG12P07277 443 aa8.49□□□□□ -1.05
UME1YPL139C EUG1P32474 517 aa8.49□□□□□ -1.05
UME1YPL139C PAH1P32567 862 aa8.49□□□□□ -1.05
UME1YPL139C ANP1P32629 500 aa8.49□□□□□ -1.05
UME1YPL139C SHP1P34223 423 aa8.49□□□□□ -1.05
UME1YPL139C BRN1P38170 754 aa8.49□□□□□ -1.05
UME1YPL139C NDT80P38830 627 aa8.49□□□□□ -1.05
UME1YPL139C SSP1P38871 571 aa8.49□□□□□ -1.05
UME1YPL139C RRP8P38961 392 aaKnown RBP8.49□□□□□ -1.05
UME1YPL139C ATG1P53104 897 aa8.49□□□□□ -1.05
UME1YPL139C HXT17P53631 564 aa8.49□□□□□ -1.05
UME1YPL139C SAM1P10659 382 aaKnown RBP8.48□□□□□ -1.05
UME1YPL139C SRP54P20424 541 aaKnown RBP8.48□□□□□ -1.05
UME1YPL139C PER1P25625 357 aa8.48□□□□□ -1.05
UME1YPL139C UTR4P32626 227 aa8.48□□□□□ -1.05
UME1YPL139C PHO88P38264 188 aaPredicted RBP8.48□□□□□ -1.05
UME1YPL139C VPS8P39702 1274 aa8.48□□□□□ -1.05
UME1YPL139C CSM2P40465 213 aa8.48□□□□□ -1.05
UME1YPL139C CTR1P49573 406 aa8.48□□□□□ -1.05
UME1YPL139C BRE5P53741 515 aaKnown RBP8.48□□□□□ -1.05
UME1YPL139C TMA64Q04600 565 aaKnown RBP8.48□□□□□ -1.05
UME1YPL139C VAS1P07806 1104 aaKnown RBP8.48□□□□□ -1.05
UME1YPL139C AFG3P39925 761 aa8.48□□□□□ -1.05
UME1YPL139C SCS3P53012 380 aa8.48□□□□□ -1.05
UME1YPL139C TY3A-GQ12173 290 aa8.48□□□□□ -1.05
UME1YPL139C YDR461C-AQ2V2P7 80 aa8.48□□□□□ -1.05
UME1YPL139C TY3A-IQ99219 290 aa8.48□□□□□ -1.05
UME1YPL139C RAD18P10862 487 aa8.47□□□□□ -1.05
UME1YPL139C VMA2P16140 517 aaKnown RBP8.47□□□□□ -1.05
UME1YPL139C DIT2P21595 489 aa8.47□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms