Protein–RNA interactions for Protein: P53012

SCS3, FIT family protein SCS3, yeastyeast

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCS3P53012 YML009W-BYML009W-B 477 nt22.88■■□□□ 1.25
SCS3P53012 NSR1YGR159C 1245 nt22.32■■□□□ 1.16
SCS3P53012 NOP1YDL014W 984 nt22.3■■□□□ 1.16
SCS3P53012 YKL036CYKL036C 393 nt21.05■□□□□ 0.96
SCS3P53012 Q0297Q0297 156 nt19.75■□□□□ 0.75
SCS3P53012 YJL027CYJL027C 417 nt19.74■□□□□ 0.75
SCS3P53012 SRX1YKL086W 384 nt19.57■□□□□ 0.72
SCS3P53012 MDJ1YFL016C 1536 nt19.56■□□□□ 0.72
SCS3P53012 SCS3YGL126W 1143 nt19.46■□□□□ 0.71
SCS3P53012 YCR051WYCR051W 669 nt18.62■□□□□ 0.57
SCS3P53012 YOL085CYOL085C 342 nt18.3■□□□□ 0.52
SCS3P53012 PKP1YIL042C 1185 nt18.02■□□□□ 0.48
SCS3P53012 RPP1BYDL130W 321 nt17.72■□□□□ 0.43
SCS3P53012 SCJ1YMR214W 1134 nt17.64■□□□□ 0.41
SCS3P53012 DBP2YNL112W 1641 nt17.51■□□□□ 0.39
SCS3P53012 ATS1YAL020C 1002 nt17.51■□□□□ 0.39
SCS3P53012 TRN1tP(UGG)A 72 nt17.48■□□□□ 0.39
SCS3P53012 SUF9tP(UGG)F 72 nt17.48■□□□□ 0.39
SCS3P53012 SUF8tP(UGG)H 72 nt17.48■□□□□ 0.39
SCS3P53012 tP(UGG)LtP(UGG)L 72 nt17.48■□□□□ 0.39
SCS3P53012 SUF7tP(UGG)M 72 nt17.48■□□□□ 0.39
SCS3P53012 tP(UGG)N1tP(UGG)N1 72 nt17.48■□□□□ 0.39
SCS3P53012 tP(UGG)N2tP(UGG)N2 72 nt17.48■□□□□ 0.39
SCS3P53012 tP(UGG)O1tP(UGG)O1 72 nt17.48■□□□□ 0.39
SCS3P53012 SUF11tP(UGG)O2 72 nt17.48■□□□□ 0.39
SCS3P53012 CCC1YLR220W 969 nt17.33■□□□□ 0.36
SCS3P53012 PET122YER153C 765 nt16.95■□□□□ 0.3
SCS3P53012 SCR1SCR1 522 nt16.73■□□□□ 0.27
SCS3P53012 tP(UGG)O3tP(UGG)O3 72 nt16.68■□□□□ 0.26
SCS3P53012 RRN5YLR141W 1092 nt16.5■□□□□ 0.23
SCS3P53012 YBR190WYBR190W 312 nt16.44■□□□□ 0.22
SCS3P53012 RVS167YDR388W 1449 nt16.33■□□□□ 0.2
SCS3P53012 RSB1YOR049C 1065 nt16.24■□□□□ 0.19
SCS3P53012 YER088W-BYER088W-B 147 nt16.19■□□□□ 0.18
SCS3P53012 PST2YDR032C 597 nt16.17■□□□□ 0.18
SCS3P53012 RTC3YHR087W 336 nt16.14■□□□□ 0.17
SCS3P53012 YDJ1YNL064C 1230 nt16.08■□□□□ 0.16
SCS3P53012 SHR5YOL110W 714 nt15.94■□□□□ 0.14
SCS3P53012 GAR1YHR089C 618 nt15.72■□□□□ 0.11
SCS3P53012 YKL097CYKL097C 411 nt15.68■□□□□ 0.1
SCS3P53012 DEP1YAL013W 1218 nt15.45■□□□□ 0.06
SCS3P53012 SHU1YHL006C 453 nt15.44■□□□□ 0.06
SCS3P53012 URN1YPR152C 1398 nt15.27■□□□□ 0.04
SCS3P53012 TIR1YER011W 765 nt15.15■□□□□ 0.02
SCS3P53012 YNL208WYNL208W 600 nt15.14■□□□□ 0.01
SCS3P53012 YAL037C-BYAL037C-B 975 nt15.12■□□□□ 0.01
SCS3P53012 YOR139CYOR139C 393 nt15.1■□□□□ 0.01
SCS3P53012 RPN10YHR200W 807 nt15.01□□□□□ -0.01
SCS3P53012 SSA1YAL005C 1929 nt14.96□□□□□ -0.01
SCS3P53012 OPI9YLR338W 858 nt14.95□□□□□ -0.02
SCS3P53012 SRB2YHR041C 633 nt14.94□□□□□ -0.02
SCS3P53012 SAH1YER043C 1350 nt14.82□□□□□ -0.04
SCS3P53012 NPL3YDR432W 1245 nt14.72□□□□□ -0.05
SCS3P53012 PUT4YOR348C 1884 nt14.7□□□□□ -0.06
SCS3P53012 MNP1YGL068W 585 nt14.65□□□□□ -0.06
SCS3P53012 WWM1YFL010C 636 nt14.62□□□□□ -0.07
SCS3P53012 YJR120WYJR120W 351 nt14.61□□□□□ -0.07
SCS3P53012 HOM6YJR139C 1080 nt14.6□□□□□ -0.07
SCS3P53012 ARE1YCR048W 1833 nt14.59□□□□□ -0.07
SCS3P53012 YJR018WYJR018W 363 nt14.57□□□□□ -0.08
SCS3P53012 YGR021WYGR021W 873 nt14.5□□□□□ -0.09
SCS3P53012 tM(CAU)CtM(CAU)C 72 nt14.46□□□□□ -0.09
SCS3P53012 IMT4tM(CAU)E 72 nt14.46□□□□□ -0.09
SCS3P53012 IMT3tM(CAU)J3 72 nt14.46□□□□□ -0.09
SCS3P53012 IMT1tM(CAU)O1 72 nt14.46□□□□□ -0.09
SCS3P53012 IMT2tM(CAU)P 72 nt14.46□□□□□ -0.09
SCS3P53012 PUN1YLR414C 792 nt14.46□□□□□ -0.09
SCS3P53012 YOL037CYOL037C 354 nt14.43□□□□□ -0.1
SCS3P53012 SSA3YBL075C 1950 nt14.41□□□□□ -0.1
SCS3P53012 RKM5YLR137W 1104 nt14.37□□□□□ -0.11
SCS3P53012 YHR049C-AYHR049C-A 297 nt14.34□□□□□ -0.11
SCS3P53012 RPP2BYDR382W 333 nt14.29□□□□□ -0.12
SCS3P53012 PTC2YER089C 1395 nt14.29□□□□□ -0.12
SCS3P53012 POA1YBR022W 534 nt14.28□□□□□ -0.12
SCS3P53012 YFL021C-AYFL021C-A 855 nt14.27□□□□□ -0.13
SCS3P53012 BDH2YAL061W 1254 nt14.17□□□□□ -0.14
SCS3P53012 PUS2YGL063W 1113 nt14.15□□□□□ -0.14
SCS3P53012 YLR281CYLR281C 468 nt14.15□□□□□ -0.14
SCS3P53012 WHI5YOR083W 888 nt14.04□□□□□ -0.16
SCS3P53012 BUD23YCR047C 828 nt14.03□□□□□ -0.16
SCS3P53012 LSM3YLR438C-A 270 nt14.03□□□□□ -0.16
SCS3P53012 MOT3YMR070W 1473 nt14.03□□□□□ -0.16
SCS3P53012 NAB2YGL122C 1578 nt13.99□□□□□ -0.17
SCS3P53012 YPR011CYPR011C 981 nt13.96□□□□□ -0.17
SCS3P53012 INM2YDR287W 879 nt13.94□□□□□ -0.18
SCS3P53012 FIS1YIL065C 468 nt13.93□□□□□ -0.18
SCS3P53012 YBL100CYBL100C 315 nt13.93□□□□□ -0.18
SCS3P53012 DAL1YIR027C 1383 nt13.91□□□□□ -0.18
SCS3P53012 FPR4YLR449W 1179 nt13.9□□□□□ -0.18
SCS3P53012 BSC6YOL137W 1494 nt13.87□□□□□ -0.19
SCS3P53012 YLR236CYLR236C 324 nt13.83□□□□□ -0.2
SCS3P53012 FUN26YAL022C 1554 nt13.81□□□□□ -0.2
SCS3P53012 FMP45YDL222C 930 nt13.81□□□□□ -0.2
SCS3P53012 PHO4YFR034C 939 nt13.8□□□□□ -0.2
SCS3P53012 TRM9YML014W 840 nt13.8□□□□□ -0.2
SCS3P53012 DSK2YMR276W 1122 nt13.75□□□□□ -0.21
SCS3P53012 YLR154C-GYLR154C-G 150 nt13.7□□□□□ -0.22
SCS3P53012 CCT6YDR188W 1641 nt13.68□□□□□ -0.22
SCS3P53012 YCH1YGR203W 447 nt13.64□□□□□ -0.23
SCS3P53012 IMP2'YIL154C 1041 nt13.57□□□□□ -0.24
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms