RNA–Protein interactions for RNA: YKR050W

TRK2, Transcript of Component of the Trk1p-Trk2p potassium transport system, yeast

Gene TRK2, Length 2,670 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRK2	YKR050W	MTC3	P53077	123 aa		6.28	□□□□□ -1.4
TRK2	YKR050W	GAP1	P19145	602 aa	Predicted RBP	6.28	□□□□□ -1.4
TRK2	YKR050W	SWI4	P25302	1093 aa	Known RBP	6.28	□□□□□ -1.4
TRK2	YKR050W	RPL8B	P29453	256 aa	Known RBP	6.28	□□□□□ -1.4
TRK2	YKR050W	MYO5	Q04439	1219 aa	Known RBP	6.28	□□□□□ -1.4
TRK2	YKR050W	YDL124W	Q07551	312 aa	Known RBP	6.28	□□□□□ -1.4
TRK2	YKR050W	ETT1	Q08421	412 aa	Known RBP	6.28	□□□□□ -1.4
TRK2	YKR050W	CLF1	Q12309	687 aa	Predicted RBP	6.28	□□□□□ -1.4
TRK2	YKR050W	YOR111W	Q99210	232 aa		6.28	□□□□□ -1.4
TRK2	YKR050W	AIM44	Q99299	758 aa		6.28	□□□□□ -1.4
TRK2	YKR050W	MYO1	P08964	1928 aa		6.27	□□□□□ -1.41
TRK2	YKR050W	PMA1	P05030	918 aa	Known RBP	6.27	□□□□□ -1.41
TRK2	YKR050W	PGI1	P12709	554 aa	Known RBP	6.27	□□□□□ -1.41
TRK2	YKR050W	RNR3	P21672	869 aa	Known RBP	6.27	□□□□□ -1.41
TRK2	YKR050W	SRM1	P21827	482 aa		6.27	□□□□□ -1.41
TRK2	YKR050W	YBL028C	P38202	106 aa		6.27	□□□□□ -1.41
TRK2	YKR050W	UTP7	P40055	554 aa	Known RBP	6.27	□□□□□ -1.41
TRK2	YKR050W	CCT5	P40413	562 aa	Known RBP	6.27	□□□□□ -1.41
TRK2	YKR050W	YGR117C	P53270	476 aa		6.27	□□□□□ -1.41
TRK2	YKR050W	GDE1	Q02979	1223 aa		6.27	□□□□□ -1.41
TRK2	YKR050W	APC11	Q12157	165 aa		6.27	□□□□□ -1.41
TRK2	YKR050W	PES4	P39684	611 aa		6.27	□□□□□ -1.41
TRK2	YKR050W	RVS167	P39743	482 aa	Known RBP	6.27	□□□□□ -1.41
TRK2	YKR050W	TCB2	P48231	1178 aa		6.27	□□□□□ -1.41
TRK2	YKR050W	SNU71	P53207	620 aa	Known RBP	6.27	□□□□□ -1.41
TRK2	YKR050W	THS1	P04801	734 aa	Known RBP	6.26	□□□□□ -1.41
TRK2	YKR050W	CBP1	P07252	654 aa		6.26	□□□□□ -1.41
TRK2	YKR050W	ACE2	P21192	770 aa		6.26	□□□□□ -1.41
TRK2	YKR050W	CST26	P38226	397 aa		6.26	□□□□□ -1.41
TRK2	YKR050W	KIN1	P13185	1064 aa		6.26	□□□□□ -1.41
TRK2	YKR050W	RPN12	P32496	274 aa		6.26	□□□□□ -1.41
TRK2	YKR050W	RTG2	P32608	588 aa	Known RBP	6.26	□□□□□ -1.41
TRK2	YKR050W	ELM1	P32801	640 aa		6.26	□□□□□ -1.41
TRK2	YKR050W	RXT2	P38255	430 aa		6.26	□□□□□ -1.41
TRK2	YKR050W	VPS30	Q02948	557 aa		6.26	□□□□□ -1.41
TRK2	YKR050W	YDR341C	Q05506	607 aa	Known RBP	6.26	□□□□□ -1.41
TRK2	YKR050W	CIT1	P00890	479 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	ASF1	P32447	279 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	NIT1	P40447	199 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	EMP47	P43555	445 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	FOL1	P53848	824 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	NBL1	Q3E7Y6	73 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	RAD53	P22216	821 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	MBR1	P23493	339 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	CHS3	P29465	1165 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	DID4	P36108	232 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	FAR11	P53917	953 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	SKG3	Q06315	1026 aa		6.25	□□□□□ -1.41
TRK2	YKR050W	HXK1	P04806	485 aa	Known RBP	6.24	□□□□□ -1.41
TRK2	YKR050W	MET6	P05694	767 aa	Known RBP	6.24	□□□□□ -1.41
TRK2	YKR050W	FRS2	P15625	503 aa	Known RBP	6.24	□□□□□ -1.41
TRK2	YKR050W	RGP1	P16664	663 aa		6.24	□□□□□ -1.41
TRK2	YKR050W	TOM71	P38825	639 aa	Known RBP	6.24	□□□□□ -1.41
TRK2	YKR050W	PCI8	P40512	444 aa		6.24	□□□□□ -1.41
TRK2	YKR050W	CEX1	Q12453	761 aa		6.24	□□□□□ -1.41
TRK2	YKR050W	CDC6	P09119	513 aa		6.24	□□□□□ -1.41
TRK2	YKR050W	CSC1	Q06538	782 aa		6.24	□□□□□ -1.41
TRK2	YKR050W	LAP2	Q10740	671 aa		6.24	□□□□□ -1.41
TRK2	YKR050W	GET3	Q12154	354 aa	Known RBP	6.24	□□□□□ -1.41
TRK2	YKR050W	YLR278C	Q05854	1341 aa		6.24	□□□□□ -1.41
TRK2	YKR050W	NUC1	P08466	329 aa		6.23	□□□□□ -1.41
TRK2	YKR050W	GAL2	P13181	574 aa		6.23	□□□□□ -1.41
TRK2	YKR050W	TPS3	P38426	1054 aa	Known RBP	6.23	□□□□□ -1.41
TRK2	YKR050W	KEL1	P38853	1164 aa	Known RBP	6.23	□□□□□ -1.41
TRK2	YKR050W	VPS45	P38932	577 aa		6.23	□□□□□ -1.41
TRK2	YKR050W	NAF1	P53919	492 aa	Known RBP	6.23	□□□□□ -1.41
TRK2	YKR050W	DCS2	Q12123	353 aa		6.23	□□□□□ -1.41
TRK2	YKR050W	DDP1	Q99321	188 aa	Known RBP	6.23	□□□□□ -1.41
TRK2	YKR050W	SEC20	P28791	383 aa		6.23	□□□□□ -1.41
TRK2	YKR050W	MDM1	Q01846	1127 aa		6.23	□□□□□ -1.41
TRK2	YKR050W	DSE3	Q08729	430 aa		6.23	□□□□□ -1.41
TRK2	YKR050W	TUB2	P02557	457 aa	Known RBP	6.22	□□□□□ -1.41
TRK2	YKR050W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
TRK2	YKR050W	VPS1	P21576	704 aa	Known RBP	6.22	□□□□□ -1.41
TRK2	YKR050W	SPT21	P35209	758 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	RSC1	P53236	928 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	GIS4	Q04233	774 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	MAK11	P20484	414 aa	Known RBP	6.22	□□□□□ -1.41
TRK2	YKR050W	KNS1	P32350	737 aa	Predicted RBP	6.22	□□□□□ -1.41
TRK2	YKR050W	RFT1	P38206	574 aa	Predicted RBP	6.22	□□□□□ -1.41
TRK2	YKR050W	UBP9	P39967	754 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	TPM2	P40414	161 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	SMD2	Q06217	110 aa	Known RBP	6.22	□□□□□ -1.41
TRK2	YKR050W	TUS1	Q06412	1307 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	SAM2	P19358	384 aa	Known RBP	6.22	□□□□□ -1.41
TRK2	YKR050W	SAS3	P34218	831 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	LSB1	P53281	241 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	KRE33	P53914	1056 aa	Known RBP	6.22	□□□□□ -1.41
TRK2	YKR050W	LCD1	Q04377	747 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	TIP41	Q12199	356 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
TRK2	YKR050W	TRS33	Q99394	268 aa		6.22	□□□□□ -1.41
TRK2	YKR050W	SRP54	P20424	541 aa	Known RBP	6.21	□□□□□ -1.42
TRK2	YKR050W	YKT6	P36015	200 aa	Known RBP	6.21	□□□□□ -1.42
TRK2	YKR050W	CCT3	P39077	534 aa	Known RBP	6.21	□□□□□ -1.42
TRK2	YKR050W	YGL138C	P53122	345 aa		6.21	□□□□□ -1.42
TRK2	YKR050W	EIS1	Q05050	843 aa	Known RBP	6.21	□□□□□ -1.42
TRK2	YKR050W	SGD1	Q06132	899 aa		6.21	□□□□□ -1.42
TRK2	YKR050W	YOR296W	Q08748	1289 aa		6.21	□□□□□ -1.42
TRK2	YKR050W	ERG12	P07277	443 aa		6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms