Protein–RNA interactions for Protein: P40414

TPM2, Tropomyosin-2, yeastyeast

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM2P40414 YML009W-BYML009W-B 477 nt23.33■■□□□ 1.33
TPM2P40414 NSR1YGR159C 1245 nt23.08■■□□□ 1.29
TPM2P40414 NOP1YDL014W 984 nt22.81■■□□□ 1.24
TPM2P40414 YKL036CYKL036C 393 nt21.14■□□□□ 0.97
TPM2P40414 MDJ1YFL016C 1536 nt20.28■□□□□ 0.84
TPM2P40414 Q0297Q0297 156 nt19.97■□□□□ 0.79
TPM2P40414 SRX1YKL086W 384 nt19.89■□□□□ 0.77
TPM2P40414 YJL027CYJL027C 417 nt19.77■□□□□ 0.76
TPM2P40414 SCS3YGL126W 1143 nt19.27■□□□□ 0.68
TPM2P40414 YCR051WYCR051W 669 nt18.88■□□□□ 0.61
TPM2P40414 YOL085CYOL085C 342 nt18.28■□□□□ 0.52
TPM2P40414 DBP2YNL112W 1641 nt17.98■□□□□ 0.47
TPM2P40414 PKP1YIL042C 1185 nt17.97■□□□□ 0.47
TPM2P40414 RPP1BYDL130W 321 nt17.92■□□□□ 0.46
TPM2P40414 TRN1tP(UGG)A 72 nt17.86■□□□□ 0.45
TPM2P40414 SUF9tP(UGG)F 72 nt17.86■□□□□ 0.45
TPM2P40414 SUF8tP(UGG)H 72 nt17.86■□□□□ 0.45
TPM2P40414 tP(UGG)LtP(UGG)L 72 nt17.86■□□□□ 0.45
TPM2P40414 SUF7tP(UGG)M 72 nt17.86■□□□□ 0.45
TPM2P40414 tP(UGG)N1tP(UGG)N1 72 nt17.86■□□□□ 0.45
TPM2P40414 tP(UGG)N2tP(UGG)N2 72 nt17.86■□□□□ 0.45
TPM2P40414 tP(UGG)O1tP(UGG)O1 72 nt17.86■□□□□ 0.45
TPM2P40414 SUF11tP(UGG)O2 72 nt17.86■□□□□ 0.45
TPM2P40414 CCC1YLR220W 969 nt17.7■□□□□ 0.42
TPM2P40414 SCJ1YMR214W 1134 nt17.33■□□□□ 0.36
TPM2P40414 YBR190WYBR190W 312 nt17.31■□□□□ 0.36
TPM2P40414 ATS1YAL020C 1002 nt17.3■□□□□ 0.36
TPM2P40414 SSA3YBL075C 1950 nt17.11■□□□□ 0.33
TPM2P40414 RVS167YDR388W 1449 nt17.07■□□□□ 0.32
TPM2P40414 PET122YER153C 765 nt17.06■□□□□ 0.32
TPM2P40414 SCR1SCR1 522 nt17.01■□□□□ 0.31
TPM2P40414 tP(UGG)O3tP(UGG)O3 72 nt16.96■□□□□ 0.31
TPM2P40414 RTC3YHR087W 336 nt16.95■□□□□ 0.3
TPM2P40414 RRN5YLR141W 1092 nt16.6■□□□□ 0.25
TPM2P40414 SHR5YOL110W 714 nt16.47■□□□□ 0.23
TPM2P40414 YDJ1YNL064C 1230 nt16.43■□□□□ 0.22
TPM2P40414 RSB1YOR049C 1065 nt16.33■□□□□ 0.2
TPM2P40414 YER088W-BYER088W-B 147 nt16.28■□□□□ 0.2
TPM2P40414 PUT4YOR348C 1884 nt16.18■□□□□ 0.18
TPM2P40414 GAR1YHR089C 618 nt16.01■□□□□ 0.15
TPM2P40414 PST2YDR032C 597 nt15.98■□□□□ 0.15
TPM2P40414 DEP1YAL013W 1218 nt15.91■□□□□ 0.14
TPM2P40414 URN1YPR152C 1398 nt15.89■□□□□ 0.13
TPM2P40414 RPN10YHR200W 807 nt15.77■□□□□ 0.12
TPM2P40414 YNL208WYNL208W 600 nt15.73■□□□□ 0.11
TPM2P40414 ARE1YCR048W 1833 nt15.64■□□□□ 0.09
TPM2P40414 OPI9YLR338W 858 nt15.64■□□□□ 0.09
TPM2P40414 POA1YBR022W 534 nt15.6■□□□□ 0.09
TPM2P40414 TIR1YER011W 765 nt15.47■□□□□ 0.07
TPM2P40414 SAH1YER043C 1350 nt15.47■□□□□ 0.07
TPM2P40414 YKL097CYKL097C 411 nt15.46■□□□□ 0.07
TPM2P40414 YHR049C-AYHR049C-A 297 nt15.43■□□□□ 0.06
TPM2P40414 BSC6YOL137W 1494 nt15.41■□□□□ 0.06
TPM2P40414 SPT5YML010W 3192 nt15.35■□□□□ 0.05
TPM2P40414 Q0182Q0182 405 nt15.3■□□□□ 0.04
TPM2P40414 SHU1YHL006C 453 nt15.28■□□□□ 0.04
TPM2P40414 SSA1YAL005C 1929 nt15.22■□□□□ 0.03
TPM2P40414 PUN1YLR414C 792 nt15.22■□□□□ 0.03
TPM2P40414 YJR018WYJR018W 363 nt15.19■□□□□ 0.02
TPM2P40414 SSA4YER103W 1929 nt15.17■□□□□ 0.02
TPM2P40414 BUD23YCR047C 828 nt15□□□□□ -0.01
TPM2P40414 RPP2BYDR382W 333 nt14.98□□□□□ -0.01
TPM2P40414 YAL037C-BYAL037C-B 975 nt14.98□□□□□ -0.01
TPM2P40414 PTC2YER089C 1395 nt14.97□□□□□ -0.01
TPM2P40414 SRB2YHR041C 633 nt14.91□□□□□ -0.02
TPM2P40414 YJR120WYJR120W 351 nt14.89□□□□□ -0.03
TPM2P40414 YGR021WYGR021W 873 nt14.83□□□□□ -0.04
TPM2P40414 WWM1YFL010C 636 nt14.8□□□□□ -0.04
TPM2P40414 NAB2YGL122C 1578 nt14.78□□□□□ -0.04
TPM2P40414 YOR139CYOR139C 393 nt14.75□□□□□ -0.05
TPM2P40414 HOM6YJR139C 1080 nt14.72□□□□□ -0.05
TPM2P40414 BDF1YLR399C 2061 nt14.69□□□□□ -0.06
TPM2P40414 NPL3YDR432W 1245 nt14.68□□□□□ -0.06
TPM2P40414 INM2YDR287W 879 nt14.67□□□□□ -0.06
TPM2P40414 BDH2YAL061W 1254 nt14.66□□□□□ -0.06
TPM2P40414 MNP1YGL068W 585 nt14.64□□□□□ -0.07
TPM2P40414 DAL1YIR027C 1383 nt14.6□□□□□ -0.07
TPM2P40414 YFL021C-AYFL021C-A 855 nt14.6□□□□□ -0.07
TPM2P40414 FPR4YLR449W 1179 nt14.58□□□□□ -0.08
TPM2P40414 MEP2YNL142W 1500 nt14.56□□□□□ -0.08
TPM2P40414 MOT3YMR070W 1473 nt14.55□□□□□ -0.08
TPM2P40414 YOL037CYOL037C 354 nt14.53□□□□□ -0.08
TPM2P40414 FIS1YIL065C 468 nt14.52□□□□□ -0.09
TPM2P40414 RKM5YLR137W 1104 nt14.52□□□□□ -0.09
TPM2P40414 LSM3YLR438C-A 270 nt14.52□□□□□ -0.09
TPM2P40414 YBL100CYBL100C 315 nt14.52□□□□□ -0.09
TPM2P40414 TAT1YBR069C 1860 nt14.47□□□□□ -0.09
TPM2P40414 PHO4YFR034C 939 nt14.45□□□□□ -0.1
TPM2P40414 TRM9YML014W 840 nt14.38□□□□□ -0.11
TPM2P40414 FUN26YAL022C 1554 nt14.34□□□□□ -0.11
TPM2P40414 DCW1YKL046C 1350 nt14.31□□□□□ -0.12
TPM2P40414 YPS1YLR120C 1710 nt14.25□□□□□ -0.13
TPM2P40414 CCT6YDR188W 1641 nt14.19□□□□□ -0.14
TPM2P40414 tM(CAU)CtM(CAU)C 72 nt14.19□□□□□ -0.14
TPM2P40414 IMT4tM(CAU)E 72 nt14.19□□□□□ -0.14
TPM2P40414 IMT3tM(CAU)J3 72 nt14.19□□□□□ -0.14
TPM2P40414 IMT1tM(CAU)O1 72 nt14.19□□□□□ -0.14
TPM2P40414 IMT2tM(CAU)P 72 nt14.19□□□□□ -0.14
TPM2P40414 YLR281CYLR281C 468 nt14.16□□□□□ -0.14
TPM2P40414 ALF1YNL148C 765 nt14.15□□□□□ -0.14
Retrieved 100 of 7,029 protein–RNA pairs in 10 ms