Protein–RNA interactions for Protein: Q06217

SMD2, Small nuclear ribonucleoprotein Sm D2, yeastyeast

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD2Q06217 YML009W-BYML009W-B 477 nt23.16■■□□□ 1.3
SMD2Q06217 NSR1YGR159C 1245 nt23.02■■□□□ 1.28
SMD2Q06217 NOP1YDL014W 984 nt22.54■■□□□ 1.2
SMD2Q06217 YKL036CYKL036C 393 nt20.89■□□□□ 0.93
SMD2Q06217 MDJ1YFL016C 1536 nt20.36■□□□□ 0.85
SMD2Q06217 Q0297Q0297 156 nt19.81■□□□□ 0.76
SMD2Q06217 SRX1YKL086W 384 nt19.74■□□□□ 0.75
SMD2Q06217 YJL027CYJL027C 417 nt19.47■□□□□ 0.71
SMD2Q06217 SCS3YGL126W 1143 nt19.05■□□□□ 0.64
SMD2Q06217 YCR051WYCR051W 669 nt18.68■□□□□ 0.58
SMD2Q06217 YOL085CYOL085C 342 nt18.12■□□□□ 0.49
SMD2Q06217 DBP2YNL112W 1641 nt18.1■□□□□ 0.49
SMD2Q06217 TRN1tP(UGG)A 72 nt17.83■□□□□ 0.44
SMD2Q06217 SUF9tP(UGG)F 72 nt17.83■□□□□ 0.44
SMD2Q06217 SUF8tP(UGG)H 72 nt17.83■□□□□ 0.44
SMD2Q06217 tP(UGG)LtP(UGG)L 72 nt17.83■□□□□ 0.44
SMD2Q06217 SUF7tP(UGG)M 72 nt17.83■□□□□ 0.44
SMD2Q06217 tP(UGG)N1tP(UGG)N1 72 nt17.83■□□□□ 0.44
SMD2Q06217 tP(UGG)N2tP(UGG)N2 72 nt17.83■□□□□ 0.44
SMD2Q06217 tP(UGG)O1tP(UGG)O1 72 nt17.83■□□□□ 0.44
SMD2Q06217 SUF11tP(UGG)O2 72 nt17.83■□□□□ 0.44
SMD2Q06217 PKP1YIL042C 1185 nt17.8■□□□□ 0.44
SMD2Q06217 RPP1BYDL130W 321 nt17.75■□□□□ 0.43
SMD2Q06217 CCC1YLR220W 969 nt17.57■□□□□ 0.4
SMD2Q06217 YBR190WYBR190W 312 nt17.35■□□□□ 0.37
SMD2Q06217 ATS1YAL020C 1002 nt17.06■□□□□ 0.32
SMD2Q06217 SCJ1YMR214W 1134 nt16.97■□□□□ 0.31
SMD2Q06217 PET122YER153C 765 nt16.96■□□□□ 0.31
SMD2Q06217 RVS167YDR388W 1449 nt16.92■□□□□ 0.3
SMD2Q06217 RTC3YHR087W 336 nt16.9■□□□□ 0.3
SMD2Q06217 tP(UGG)O3tP(UGG)O3 72 nt16.88■□□□□ 0.29
SMD2Q06217 SCR1SCR1 522 nt16.74■□□□□ 0.27
SMD2Q06217 RRN5YLR141W 1092 nt16.48■□□□□ 0.23
SMD2Q06217 SHR5YOL110W 714 nt16.4■□□□□ 0.22
SMD2Q06217 YDJ1YNL064C 1230 nt16.34■□□□□ 0.21
SMD2Q06217 YER088W-BYER088W-B 147 nt16.16■□□□□ 0.18
SMD2Q06217 RSB1YOR049C 1065 nt16.11■□□□□ 0.17
SMD2Q06217 GAR1YHR089C 618 nt15.92■□□□□ 0.14
SMD2Q06217 URN1YPR152C 1398 nt15.88■□□□□ 0.13
SMD2Q06217 DEP1YAL013W 1218 nt15.88■□□□□ 0.13
SMD2Q06217 PST2YDR032C 597 nt15.82■□□□□ 0.12
SMD2Q06217 PUT4YOR348C 1884 nt15.74■□□□□ 0.11
SMD2Q06217 OPI9YLR338W 858 nt15.68■□□□□ 0.1
SMD2Q06217 YNL208WYNL208W 600 nt15.66■□□□□ 0.1
SMD2Q06217 RPN10YHR200W 807 nt15.64■□□□□ 0.09
SMD2Q06217 SAH1YER043C 1350 nt15.54■□□□□ 0.08
SMD2Q06217 ARE1YCR048W 1833 nt15.47■□□□□ 0.07
SMD2Q06217 TIR1YER011W 765 nt15.4■□□□□ 0.06
SMD2Q06217 YHR049C-AYHR049C-A 297 nt15.23■□□□□ 0.03
SMD2Q06217 SSA1YAL005C 1929 nt15.22■□□□□ 0.03
SMD2Q06217 POA1YBR022W 534 nt15.22■□□□□ 0.03
SMD2Q06217 PUN1YLR414C 792 nt15.2■□□□□ 0.02
SMD2Q06217 YJR018WYJR018W 363 nt15.16■□□□□ 0.02
SMD2Q06217 YKL097CYKL097C 411 nt15.16■□□□□ 0.02
SMD2Q06217 SHU1YHL006C 453 nt15.15■□□□□ 0.02
SMD2Q06217 YJR120WYJR120W 351 nt15.04■□□□□ -0
SMD2Q06217 SRB2YHR041C 633 nt15.03■□□□□ -0
SMD2Q06217 PTC2YER089C 1395 nt14.99□□□□□ -0.01
SMD2Q06217 BSC6YOL137W 1494 nt14.89□□□□□ -0.03
SMD2Q06217 YAL037C-BYAL037C-B 975 nt14.86□□□□□ -0.03
SMD2Q06217 BUD23YCR047C 828 nt14.84□□□□□ -0.03
SMD2Q06217 RPP2BYDR382W 333 nt14.84□□□□□ -0.03
SMD2Q06217 NAB2YGL122C 1578 nt14.79□□□□□ -0.04
SMD2Q06217 WWM1YFL010C 636 nt14.74□□□□□ -0.05
SMD2Q06217 SSA3YBL075C 1950 nt14.66□□□□□ -0.06
SMD2Q06217 YGR021WYGR021W 873 nt14.65□□□□□ -0.06
SMD2Q06217 HOM6YJR139C 1080 nt14.65□□□□□ -0.06
SMD2Q06217 FIS1YIL065C 468 nt14.64□□□□□ -0.07
SMD2Q06217 INM2YDR287W 879 nt14.62□□□□□ -0.07
SMD2Q06217 DAL1YIR027C 1383 nt14.61□□□□□ -0.07
SMD2Q06217 YOR139CYOR139C 393 nt14.61□□□□□ -0.07
SMD2Q06217 BDH2YAL061W 1254 nt14.6□□□□□ -0.07
SMD2Q06217 MNP1YGL068W 585 nt14.55□□□□□ -0.08
SMD2Q06217 FPR4YLR449W 1179 nt14.52□□□□□ -0.09
SMD2Q06217 YFL021C-AYFL021C-A 855 nt14.5□□□□□ -0.09
SMD2Q06217 PHO4YFR034C 939 nt14.48□□□□□ -0.09
SMD2Q06217 YBL100CYBL100C 315 nt14.48□□□□□ -0.09
SMD2Q06217 LSM3YLR438C-A 270 nt14.44□□□□□ -0.1
SMD2Q06217 RKM5YLR137W 1104 nt14.42□□□□□ -0.1
SMD2Q06217 NPL3YDR432W 1245 nt14.39□□□□□ -0.11
SMD2Q06217 YOL037CYOL037C 354 nt14.34□□□□□ -0.11
SMD2Q06217 FUN26YAL022C 1554 nt14.33□□□□□ -0.12
SMD2Q06217 TRM9YML014W 840 nt14.29□□□□□ -0.12
SMD2Q06217 SPT5YML010W 3192 nt14.21□□□□□ -0.13
SMD2Q06217 YPS1YLR120C 1710 nt14.2□□□□□ -0.14
SMD2Q06217 CCT6YDR188W 1641 nt14.18□□□□□ -0.14
SMD2Q06217 YDR095CYDR095C 411 nt14.13□□□□□ -0.15
SMD2Q06217 ALF1YNL148C 765 nt14.06□□□□□ -0.16
SMD2Q06217 tM(CAU)CtM(CAU)C 72 nt14.04□□□□□ -0.16
SMD2Q06217 IMT4tM(CAU)E 72 nt14.04□□□□□ -0.16
SMD2Q06217 IMT3tM(CAU)J3 72 nt14.04□□□□□ -0.16
SMD2Q06217 IMT1tM(CAU)O1 72 nt14.04□□□□□ -0.16
SMD2Q06217 IMT2tM(CAU)P 72 nt14.04□□□□□ -0.16
SMD2Q06217 YLR281CYLR281C 468 nt14.03□□□□□ -0.16
SMD2Q06217 SUF2tP(AGG)C 72 nt14.01□□□□□ -0.17
SMD2Q06217 SUF10tP(AGG)N 72 nt14.01□□□□□ -0.17
SMD2Q06217 YHR165W-AYHR165W-A 312 nt13.98□□□□□ -0.17
SMD2Q06217 MEP2YNL142W 1500 nt13.97□□□□□ -0.17
SMD2Q06217 WHI5YOR083W 888 nt13.96□□□□□ -0.17
SMD2Q06217 SIS1YNL007C 1059 nt13.93□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms