RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C SEC7P11075 2009 aaKnown RBP3.55□□□□□ -1.84
SGS1YMR190C PTP3P40048 928 aa3.54□□□□□ -1.84
SGS1YMR190C EAR1Q03212 550 aa3.53□□□□□ -1.84
SGS1YMR190C YSP2Q06681 1438 aa3.53□□□□□ -1.84
SGS1YMR190C YBL086CP38177 466 aa3.53□□□□□ -1.84
SGS1YMR190C SAS10Q12136 610 aaPredicted RBP3.53□□□□□ -1.84
SGS1YMR190C SRB8P25648 1427 aa3.53□□□□□ -1.84
SGS1YMR190C BDF1P35817 686 aa3.53□□□□□ -1.84
SGS1YMR190C TAF5P38129 798 aa3.53□□□□□ -1.84
SGS1YMR190C ENT1Q12518 454 aa3.52□□□□□ -1.85
SGS1YMR190C NUP188P52593 1655 aaKnown RBP3.52□□□□□ -1.85
SGS1YMR190C LEO1P38439 464 aa3.51□□□□□ -1.85
SGS1YMR190C RSC30P38781 883 aa3.51□□□□□ -1.85
SGS1YMR190C YLR419WQ06698 1435 aaKnown RBP3.51□□□□□ -1.85
SGS1YMR190C IFH1P39520 1085 aa3.5□□□□□ -1.85
SGS1YMR190C YKR023WP36119 530 aaKnown RBP3.5□□□□□ -1.85
SGS1YMR190C CTT1P06115 562 aa3.49□□□□□ -1.85
SGS1YMR190C SRF1Q12516 437 aa3.49□□□□□ -1.85
SGS1YMR190C MDG1P53885 366 aa3.49□□□□□ -1.85
SGS1YMR190C RIA1P53893 1110 aa3.49□□□□□ -1.85
SGS1YMR190C GLC3P32775 704 aa3.48□□□□□ -1.85
SGS1YMR190C NUP192P47054 1683 aa3.48□□□□□ -1.85
SGS1YMR190C RAD9P14737 1309 aa3.48□□□□□ -1.85
SGS1YMR190C RSF2P46974 1380 aa3.48□□□□□ -1.85
SGS1YMR190C YNR029CP53729 429 aaKnown RBP3.48□□□□□ -1.85
SGS1YMR190C BUG1Q12191 341 aa3.48□□□□□ -1.85
SGS1YMR190C CHZ1P40019 153 aaPredicted RBP3.47□□□□□ -1.85
SGS1YMR190C REB1P21538 810 aa3.47□□□□□ -1.85
SGS1YMR190C BSD2P38356 321 aa3.47□□□□□ -1.85
SGS1YMR190C YER156CP40093 338 aaKnown RBP3.46□□□□□ -1.85
SGS1YMR190C IES2P40154 320 aa3.46□□□□□ -1.85
SGS1YMR190C DIB1Q06819 143 aaPredicted RBP3.46□□□□□ -1.85
SGS1YMR190C UTP22P53254 1237 aaPredicted RBP3.46□□□□□ -1.86
SGS1YMR190C YKL222CP35995 705 aa3.45□□□□□ -1.86
SGS1YMR190C TY3B-IQ7LHG5 1498 aaKnown RBP3.45□□□□□ -1.86
SGS1YMR190C FPK1P53739 893 aa3.45□□□□□ -1.86
SGS1YMR190C TCB1Q12466 1186 aa3.44□□□□□ -1.86
SGS1YMR190C TIF4632P39936 914 aaKnown RBP3.44□□□□□ -1.86
SGS1YMR190C ZDS2P54786 942 aa3.44□□□□□ -1.86
SGS1YMR190C TIF6Q12522 245 aaKnown RBP3.43□□□□□ -1.86
SGS1YMR190C NOP7P53261 605 aaKnown RBP3.43□□□□□ -1.86
SGS1YMR190C DUS1P53759 423 aaKnown RBP3.43□□□□□ -1.86
SGS1YMR190C APP1P53933 587 aa3.43□□□□□ -1.86
SGS1YMR190C HPC2Q01448 625 aa3.43□□□□□ -1.86
SGS1YMR190C MAC1P35192 417 aa3.43□□□□□ -1.86
SGS1YMR190C YFR016CP43597 1233 aaKnown RBP3.42□□□□□ -1.86
SGS1YMR190C YFL040WP43562 540 aa3.42□□□□□ -1.86
SGS1YMR190C MSB4Q12317 492 aa3.41□□□□□ -1.86
SGS1YMR190C PSK1P31374 1356 aa3.41□□□□□ -1.86
SGS1YMR190C PUS5Q06244 254 aa3.41□□□□□ -1.86
SGS1YMR190C GRX6Q12438 231 aa3.41□□□□□ -1.86
SGS1YMR190C SDH2P21801 266 aa3.4□□□□□ -1.86
SGS1YMR190C YLL066CQ99208 1374 aa3.4□□□□□ -1.86
SGS1YMR190C PRP5P21372 849 aaPredicted RBP3.4□□□□□ -1.86
SGS1YMR190C PRP45P28004 379 aaPredicted RBP3.4□□□□□ -1.86
SGS1YMR190C RTF1P53064 558 aa3.4□□□□□ -1.86
SGS1YMR190C WHI3P34761 661 aaKnown RBP3.4□□□□□ -1.87
SGS1YMR190C MSN5P52918 1224 aa3.4□□□□□ -1.87
SGS1YMR190C TYW1Q08960 810 aaKnown RBP3.4□□□□□ -1.87
SGS1YMR190C RPS9AO13516 197 aaKnown RBP3.39□□□□□ -1.87
SGS1YMR190C GRX1P25373 110 aaKnown RBP3.39□□□□□ -1.87
SGS1YMR190C UBX2Q04228 584 aa3.39□□□□□ -1.87
SGS1YMR190C RAV1P47104 1357 aa3.39□□□□□ -1.87
SGS1YMR190C RPN11P43588 306 aaKnown RBP3.38□□□□□ -1.87
SGS1YMR190C RAD4P14736 754 aa3.38□□□□□ -1.87
SGS1YMR190C CRF1Q04930 467 aa3.38□□□□□ -1.87
SGS1YMR190C MSC7P38694 644 aa3.38□□□□□ -1.87
SGS1YMR190C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SGS1YMR190C ESL2P36168 1195 aa3.37□□□□□ -1.87
SGS1YMR190C RRT6P53117 311 aaPredicted RBP3.37□□□□□ -1.87
SGS1YMR190C YAF9P53930 226 aa3.37□□□□□ -1.87
SGS1YMR190C ATG13Q06628 738 aa3.37□□□□□ -1.87
SGS1YMR190C NYV1Q12255 253 aa3.37□□□□□ -1.87
SGS1YMR190C YKL133CP36066 463 aa3.36□□□□□ -1.87
SGS1YMR190C NCS6P53088 359 aa3.36□□□□□ -1.87
SGS1YMR190C FMP30Q02883 468 aa3.36□□□□□ -1.87
SGS1YMR190C PSD2P53037 1138 aaKnown RBP3.36□□□□□ -1.87
SGS1YMR190C IRC3Q06683 689 aa3.36□□□□□ -1.87
SGS1YMR190C USO1P25386 1790 aa3.36□□□□□ -1.87
SGS1YMR190C YRF1-2P40105 1681 aa3.35□□□□□ -1.87
SGS1YMR190C RTC1Q08281 1341 aa3.35□□□□□ -1.87
SGS1YMR190C RPG1P38249 964 aaKnown RBP3.35□□□□□ -1.87
SGS1YMR190C RTG2P32608 588 aaKnown RBP3.35□□□□□ -1.87
SGS1YMR190C ADE6P38972 1358 aaKnown RBP3.35□□□□□ -1.87
SGS1YMR190C MSM1P22438 575 aa3.34□□□□□ -1.87
SGS1YMR190C MTR4P47047 1073 aaKnown RBP3.34□□□□□ -1.87
SGS1YMR190C MLP1Q02455 1875 aaKnown RBP3.34□□□□□ -1.87
SGS1YMR190C ALD4P46367 519 aaKnown RBP3.34□□□□□ -1.87
SGS1YMR190C POM152P39685 1337 aa3.34□□□□□ -1.87
SGS1YMR190C SLI15P38283 698 aa3.34□□□□□ -1.88
SGS1YMR190C SQS1P53866 767 aaKnown RBP3.34□□□□□ -1.88
SGS1YMR190C TIM50Q02776 476 aa3.34□□□□□ -1.88
SGS1YMR190C AAD16Q02895 342 aa3.34□□□□□ -1.88
SGS1YMR190C GAL2P13181 574 aa3.33□□□□□ -1.88
SGS1YMR190C CWC15Q03772 175 aaKnown RBP3.33□□□□□ -1.88
SGS1YMR190C AIM7Q12156 149 aa3.33□□□□□ -1.88
SGS1YMR190C PFF1P38244 976 aa3.33□□□□□ -1.88
SGS1YMR190C CTF4Q01454 927 aa3.33□□□□□ -1.88
SGS1YMR190C PSF3Q12146 194 aa3.33□□□□□ -1.88
SGS1YMR190C SUP35P05453 685 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms