Protein–RNA interactions for Protein: P47047

MTR4, ATP-dependent RNA helicase DOB1, yeastyeast

Known RBP Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MTR4P47047 YML009W-BYML009W-B 477 nt27.43■■□□□ 1.98
MTR4P47047 NSR1YGR159C 1245 nt26.82■■□□□ 1.88
MTR4P47047 NOP1YDL014W 984 nt26.76■■□□□ 1.87
MTR4P47047 YKL036CYKL036C 393 nt25.06■■□□□ 1.6
MTR4P47047 MDJ1YFL016C 1536 nt23.54■■□□□ 1.36
MTR4P47047 Q0297Q0297 156 nt23.51■■□□□ 1.35
MTR4P47047 YJL027CYJL027C 417 nt23.51■■□□□ 1.35
MTR4P47047 SRX1YKL086W 384 nt23.37■■□□□ 1.33
MTR4P47047 SCS3YGL126W 1143 nt23.01■■□□□ 1.27
MTR4P47047 YCR051WYCR051W 669 nt22.29■■□□□ 1.16
MTR4P47047 YOL085CYOL085C 342 nt21.69■■□□□ 1.06
MTR4P47047 PKP1YIL042C 1185 nt21.39■■□□□ 1.01
MTR4P47047 RPP1BYDL130W 321 nt21.13■□□□□ 0.97
MTR4P47047 DBP2YNL112W 1641 nt20.92■□□□□ 0.94
MTR4P47047 TRN1tP(UGG)A 72 nt20.9■□□□□ 0.94
MTR4P47047 SUF9tP(UGG)F 72 nt20.9■□□□□ 0.94
MTR4P47047 SUF8tP(UGG)H 72 nt20.9■□□□□ 0.94
MTR4P47047 tP(UGG)LtP(UGG)L 72 nt20.9■□□□□ 0.94
MTR4P47047 SUF7tP(UGG)M 72 nt20.9■□□□□ 0.94
MTR4P47047 tP(UGG)N1tP(UGG)N1 72 nt20.9■□□□□ 0.94
MTR4P47047 tP(UGG)N2tP(UGG)N2 72 nt20.9■□□□□ 0.94
MTR4P47047 tP(UGG)O1tP(UGG)O1 72 nt20.9■□□□□ 0.94
MTR4P47047 SUF11tP(UGG)O2 72 nt20.9■□□□□ 0.94
MTR4P47047 CCC1YLR220W 969 nt20.8■□□□□ 0.92
MTR4P47047 SCJ1YMR214W 1134 nt20.79■□□□□ 0.92
MTR4P47047 ATS1YAL020C 1002 nt20.68■□□□□ 0.9
MTR4P47047 PET122YER153C 765 nt20.17■□□□□ 0.82
MTR4P47047 SCR1SCR1 522 nt20.07■□□□□ 0.8
MTR4P47047 tP(UGG)O3tP(UGG)O3 72 nt19.93■□□□□ 0.78
MTR4P47047 YBR190WYBR190W 312 nt19.89■□□□□ 0.77
MTR4P47047 RVS167YDR388W 1449 nt19.81■□□□□ 0.76
MTR4P47047 RRN5YLR141W 1092 nt19.63■□□□□ 0.73
MTR4P47047 RTC3YHR087W 336 nt19.58■□□□□ 0.72
MTR4P47047 RSB1YOR049C 1065 nt19.38■□□□□ 0.69
MTR4P47047 YER088W-BYER088W-B 147 nt19.24■□□□□ 0.67
MTR4P47047 YDJ1YNL064C 1230 nt19.22■□□□□ 0.67
MTR4P47047 SHR5YOL110W 714 nt19.18■□□□□ 0.66
MTR4P47047 PST2YDR032C 597 nt19.06■□□□□ 0.64
MTR4P47047 GAR1YHR089C 618 nt18.83■□□□□ 0.6
MTR4P47047 DEP1YAL013W 1218 nt18.59■□□□□ 0.57
MTR4P47047 YKL097CYKL097C 411 nt18.56■□□□□ 0.56
MTR4P47047 URN1YPR152C 1398 nt18.43■□□□□ 0.54
MTR4P47047 YNL208WYNL208W 600 nt18.27■□□□□ 0.52
MTR4P47047 RPN10YHR200W 807 nt18.24■□□□□ 0.51
MTR4P47047 SHU1YHL006C 453 nt18.23■□□□□ 0.51
MTR4P47047 TIR1YER011W 765 nt18.14■□□□□ 0.49
MTR4P47047 OPI9YLR338W 858 nt18.04■□□□□ 0.48
MTR4P47047 YAL037C-BYAL037C-B 975 nt17.89■□□□□ 0.45
MTR4P47047 SAH1YER043C 1350 nt17.87■□□□□ 0.45
MTR4P47047 SSA1YAL005C 1929 nt17.84■□□□□ 0.45
MTR4P47047 PUT4YOR348C 1884 nt17.76■□□□□ 0.43
MTR4P47047 YOR139CYOR139C 393 nt17.72■□□□□ 0.43
MTR4P47047 SRB2YHR041C 633 nt17.62■□□□□ 0.41
MTR4P47047 YJR018WYJR018W 363 nt17.6■□□□□ 0.41
MTR4P47047 ARE1YCR048W 1833 nt17.58■□□□□ 0.4
MTR4P47047 NPL3YDR432W 1245 nt17.54■□□□□ 0.4
MTR4P47047 PUN1YLR414C 792 nt17.53■□□□□ 0.4
MTR4P47047 WWM1YFL010C 636 nt17.43■□□□□ 0.38
MTR4P47047 YGR021WYGR021W 873 nt17.41■□□□□ 0.38
MTR4P47047 MNP1YGL068W 585 nt17.4■□□□□ 0.38
MTR4P47047 YHR049C-AYHR049C-A 297 nt17.4■□□□□ 0.38
MTR4P47047 RPP2BYDR382W 333 nt17.37■□□□□ 0.37
MTR4P47047 YJR120WYJR120W 351 nt17.36■□□□□ 0.37
MTR4P47047 HOM6YJR139C 1080 nt17.36■□□□□ 0.37
MTR4P47047 POA1YBR022W 534 nt17.3■□□□□ 0.36
MTR4P47047 PTC2YER089C 1395 nt17.28■□□□□ 0.36
MTR4P47047 YOL037CYOL037C 354 nt17.2■□□□□ 0.34
MTR4P47047 RKM5YLR137W 1104 nt17.12■□□□□ 0.33
MTR4P47047 YFL021C-AYFL021C-A 855 nt17.1■□□□□ 0.33
MTR4P47047 BUD23YCR047C 828 nt17.08■□□□□ 0.32
MTR4P47047 BDH2YAL061W 1254 nt17.05■□□□□ 0.32
MTR4P47047 tM(CAU)CtM(CAU)C 72 nt16.99■□□□□ 0.31
MTR4P47047 IMT4tM(CAU)E 72 nt16.99■□□□□ 0.31
MTR4P47047 IMT3tM(CAU)J3 72 nt16.99■□□□□ 0.31
MTR4P47047 IMT1tM(CAU)O1 72 nt16.99■□□□□ 0.31
MTR4P47047 IMT2tM(CAU)P 72 nt16.99■□□□□ 0.31
MTR4P47047 NAB2YGL122C 1578 nt16.98■□□□□ 0.31
MTR4P47047 SSA3YBL075C 1950 nt16.95■□□□□ 0.3
MTR4P47047 FPR4YLR449W 1179 nt16.91■□□□□ 0.3
MTR4P47047 INM2YDR287W 879 nt16.89■□□□□ 0.29
MTR4P47047 LSM3YLR438C-A 270 nt16.88■□□□□ 0.29
MTR4P47047 YBL100CYBL100C 315 nt16.84■□□□□ 0.29
MTR4P47047 DAL1YIR027C 1383 nt16.84■□□□□ 0.29
MTR4P47047 BSC6YOL137W 1494 nt16.83■□□□□ 0.28
MTR4P47047 PUS2YGL063W 1113 nt16.8■□□□□ 0.28
MTR4P47047 YLR281CYLR281C 468 nt16.77■□□□□ 0.28
MTR4P47047 FIS1YIL065C 468 nt16.76■□□□□ 0.27
MTR4P47047 TRM9YML014W 840 nt16.69■□□□□ 0.26
MTR4P47047 WHI5YOR083W 888 nt16.69■□□□□ 0.26
MTR4P47047 PHO4YFR034C 939 nt16.68■□□□□ 0.26
MTR4P47047 FUN26YAL022C 1554 nt16.64■□□□□ 0.25
MTR4P47047 MOT3YMR070W 1473 nt16.5■□□□□ 0.23
MTR4P47047 CCT6YDR188W 1641 nt16.45■□□□□ 0.22
MTR4P47047 YLR154C-GYLR154C-G 150 nt16.39■□□□□ 0.21
MTR4P47047 DSK2YMR276W 1122 nt16.39■□□□□ 0.21
MTR4P47047 FMP45YDL222C 930 nt16.38■□□□□ 0.21
MTR4P47047 ALF1YNL148C 765 nt16.36■□□□□ 0.21
MTR4P47047 YPR011CYPR011C 981 nt16.35■□□□□ 0.21
MTR4P47047 YLR236CYLR236C 324 nt16.32■□□□□ 0.2
MTR4P47047 SUF2tP(AGG)C 72 nt16.31■□□□□ 0.2
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms