Protein–RNA interactions for Protein: P52593

NUP188, Nucleoporin NUP188, yeastyeast

Known RBP Predictions only

Length 1,655 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP188P52593 YML009W-BYML009W-B 477 nt29.8■■■□□ 2.36
NUP188P52593 NOP1YDL014W 984 nt28.67■■■□□ 2.18
NUP188P52593 NSR1YGR159C 1245 nt28.58■■■□□ 2.16
NUP188P52593 YKL036CYKL036C 393 nt27.29■■□□□ 1.96
NUP188P52593 YJL027CYJL027C 417 nt25.57■■□□□ 1.68
NUP188P52593 Q0297Q0297 156 nt25.45■■□□□ 1.67
NUP188P52593 MDJ1YFL016C 1536 nt25.35■■□□□ 1.65
NUP188P52593 SRX1YKL086W 384 nt25.35■■□□□ 1.65
NUP188P52593 SCS3YGL126W 1143 nt25.32■■□□□ 1.64
NUP188P52593 YCR051WYCR051W 669 nt24.17■■□□□ 1.46
NUP188P52593 YOL085CYOL085C 342 nt23.49■■□□□ 1.35
NUP188P52593 PKP1YIL042C 1185 nt23.38■■□□□ 1.33
NUP188P52593 SCJ1YMR214W 1134 nt22.85■■□□□ 1.25
NUP188P52593 RPP1BYDL130W 321 nt22.83■■□□□ 1.24
NUP188P52593 TRN1tP(UGG)A 72 nt22.68■■□□□ 1.22
NUP188P52593 SUF9tP(UGG)F 72 nt22.68■■□□□ 1.22
NUP188P52593 SUF8tP(UGG)H 72 nt22.68■■□□□ 1.22
NUP188P52593 tP(UGG)LtP(UGG)L 72 nt22.68■■□□□ 1.22
NUP188P52593 SUF7tP(UGG)M 72 nt22.68■■□□□ 1.22
NUP188P52593 tP(UGG)N1tP(UGG)N1 72 nt22.68■■□□□ 1.22
NUP188P52593 tP(UGG)N2tP(UGG)N2 72 nt22.68■■□□□ 1.22
NUP188P52593 tP(UGG)O1tP(UGG)O1 72 nt22.68■■□□□ 1.22
NUP188P52593 SUF11tP(UGG)O2 72 nt22.68■■□□□ 1.22
NUP188P52593 ATS1YAL020C 1002 nt22.55■■□□□ 1.2
NUP188P52593 DBP2YNL112W 1641 nt22.52■■□□□ 1.2
NUP188P52593 CCC1YLR220W 969 nt22.39■■□□□ 1.18
NUP188P52593 PET122YER153C 765 nt22■■□□□ 1.11
NUP188P52593 SCR1SCR1 522 nt21.7■■□□□ 1.06
NUP188P52593 tP(UGG)O3tP(UGG)O3 72 nt21.53■■□□□ 1.04
NUP188P52593 RRN5YLR141W 1092 nt21.21■□□□□ 0.99
NUP188P52593 RVS167YDR388W 1449 nt21.15■□□□□ 0.98
NUP188P52593 RSB1YOR049C 1065 nt21.15■□□□□ 0.98
NUP188P52593 YBR190WYBR190W 312 nt21.07■□□□□ 0.96
NUP188P52593 RTC3YHR087W 336 nt21.06■□□□□ 0.96
NUP188P52593 YER088W-BYER088W-B 147 nt20.83■□□□□ 0.92
NUP188P52593 PST2YDR032C 597 nt20.74■□□□□ 0.91
NUP188P52593 YDJ1YNL064C 1230 nt20.66■□□□□ 0.9
NUP188P52593 SHR5YOL110W 714 nt20.61■□□□□ 0.89
NUP188P52593 YKL097CYKL097C 411 nt20.43■□□□□ 0.86
NUP188P52593 GAR1YHR089C 618 nt20.3■□□□□ 0.84
NUP188P52593 DEP1YAL013W 1218 nt20.07■□□□□ 0.8
NUP188P52593 SHU1YHL006C 453 nt19.99■□□□□ 0.79
NUP188P52593 URN1YPR152C 1398 nt19.8■□□□□ 0.76
NUP188P52593 YAL037C-BYAL037C-B 975 nt19.63■□□□□ 0.73
NUP188P52593 YOR139CYOR139C 393 nt19.59■□□□□ 0.73
NUP188P52593 TIR1YER011W 765 nt19.54■□□□□ 0.72
NUP188P52593 YNL208WYNL208W 600 nt19.48■□□□□ 0.71
NUP188P52593 RPN10YHR200W 807 nt19.43■□□□□ 0.7
NUP188P52593 SRB2YHR041C 633 nt19.29■□□□□ 0.68
NUP188P52593 SSA1YAL005C 1929 nt19.24■□□□□ 0.67
NUP188P52593 NPL3YDR432W 1245 nt19.21■□□□□ 0.67
NUP188P52593 OPI9YLR338W 858 nt19.21■□□□□ 0.67
NUP188P52593 MNP1YGL068W 585 nt19.2■□□□□ 0.66
NUP188P52593 SAH1YER043C 1350 nt19.11■□□□□ 0.65
NUP188P52593 WWM1YFL010C 636 nt18.95■□□□□ 0.62
NUP188P52593 YJR120WYJR120W 351 nt18.92■□□□□ 0.62
NUP188P52593 HOM6YJR139C 1080 nt18.89■□□□□ 0.61
NUP188P52593 YGR021WYGR021W 873 nt18.83■□□□□ 0.61
NUP188P52593 YOL037CYOL037C 354 nt18.82■□□□□ 0.6
NUP188P52593 YJR018WYJR018W 363 nt18.81■□□□□ 0.6
NUP188P52593 PUT4YOR348C 1884 nt18.77■□□□□ 0.6
NUP188P52593 ARE1YCR048W 1833 nt18.72■□□□□ 0.59
NUP188P52593 YHR049C-AYHR049C-A 297 nt18.69■□□□□ 0.58
NUP188P52593 PUN1YLR414C 792 nt18.63■□□□□ 0.57
NUP188P52593 RKM5YLR137W 1104 nt18.58■□□□□ 0.57
NUP188P52593 tM(CAU)CtM(CAU)C 72 nt18.52■□□□□ 0.56
NUP188P52593 IMT4tM(CAU)E 72 nt18.52■□□□□ 0.56
NUP188P52593 IMT3tM(CAU)J3 72 nt18.52■□□□□ 0.56
NUP188P52593 IMT1tM(CAU)O1 72 nt18.52■□□□□ 0.56
NUP188P52593 IMT2tM(CAU)P 72 nt18.52■□□□□ 0.56
NUP188P52593 RPP2BYDR382W 333 nt18.5■□□□□ 0.55
NUP188P52593 YFL021C-AYFL021C-A 855 nt18.47■□□□□ 0.55
NUP188P52593 SSA3YBL075C 1950 nt18.42■□□□□ 0.54
NUP188P52593 PTC2YER089C 1395 nt18.33■□□□□ 0.52
NUP188P52593 BDH2YAL061W 1254 nt18.33■□□□□ 0.52
NUP188P52593 PUS2YGL063W 1113 nt18.31■□□□□ 0.52
NUP188P52593 POA1YBR022W 534 nt18.29■□□□□ 0.52
NUP188P52593 MOT3YMR070W 1473 nt18.24■□□□□ 0.51
NUP188P52593 BUD23YCR047C 828 nt18.22■□□□□ 0.51
NUP188P52593 YLR281CYLR281C 468 nt18.21■□□□□ 0.51
NUP188P52593 WHI5YOR083W 888 nt18.14■□□□□ 0.49
NUP188P52593 FIS1YIL065C 468 nt18.11■□□□□ 0.49
NUP188P52593 YBL100CYBL100C 315 nt18.08■□□□□ 0.48
NUP188P52593 BSC6YOL137W 1494 nt18.07■□□□□ 0.48
NUP188P52593 YLR236CYLR236C 324 nt18.04■□□□□ 0.48
NUP188P52593 FMP45YDL222C 930 nt17.99■□□□□ 0.47
NUP188P52593 NAB2YGL122C 1578 nt17.97■□□□□ 0.47
NUP188P52593 FPR4YLR449W 1179 nt17.96■□□□□ 0.47
NUP188P52593 PHO4YFR034C 939 nt17.93■□□□□ 0.46
NUP188P52593 LSM3YLR438C-A 270 nt17.91■□□□□ 0.46
NUP188P52593 YPR011CYPR011C 981 nt17.9■□□□□ 0.46
NUP188P52593 DAL1YIR027C 1383 nt17.86■□□□□ 0.45
NUP188P52593 DSK2YMR276W 1122 nt17.86■□□□□ 0.45
NUP188P52593 INM2YDR287W 879 nt17.8■□□□□ 0.44
NUP188P52593 YLR154C-GYLR154C-G 150 nt17.77■□□□□ 0.44
NUP188P52593 FUN26YAL022C 1554 nt17.74■□□□□ 0.43
NUP188P52593 TRM9YML014W 840 nt17.73■□□□□ 0.43
NUP188P52593 LPX1YOR084W 1164 nt17.65■□□□□ 0.42
NUP188P52593 YCH1YGR203W 447 nt17.62■□□□□ 0.41
NUP188P52593 IMP2'YIL154C 1041 nt17.61■□□□□ 0.41
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms