RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C INO80P53115 1489 aa5.12□□□□□ -1.59
SGS1YMR190C RSE1Q04693 1361 aaKnown RBP4.97□□□□□ -1.61
SGS1YMR190C MON2P48563 1636 aaPredicted RBP4.92□□□□□ -1.62
SGS1YMR190C MTC1P47018 478 aaKnown RBP4.91□□□□□ -1.62
SGS1YMR190C KOG1P38873 1557 aa4.85□□□□□ -1.63
SGS1YMR190C TCB3Q03640 1545 aaKnown RBP4.71□□□□□ -1.65
SGS1YMR190C MIF2P35201 549 aa4.69□□□□□ -1.66
SGS1YMR190C DNA2P38859 1522 aa4.66□□□□□ -1.66
SGS1YMR190C SWR1Q05471 1514 aa4.66□□□□□ -1.66
SGS1YMR190C SPA2P23201 1466 aaKnown RBP4.57□□□□□ -1.68
SGS1YMR190C TY1B-DR4Q07793 1604 aa4.49□□□□□ -1.69
SGS1YMR190C SGS1P35187 1447 aa4.48□□□□□ -1.69
SGS1YMR190C THO2P53552 1597 aaKnown RBP4.42□□□□□ -1.7
SGS1YMR190C BUD4P47136 1447 aa4.41□□□□□ -1.7
SGS1YMR190C SPT6P23615 1451 aaKnown RBP4.37□□□□□ -1.71
SGS1YMR190C LTE1P07866 1435 aa4.35□□□□□ -1.71
SGS1YMR190C ABP1P15891 592 aaKnown RBP4.33□□□□□ -1.72
SGS1YMR190C ECM5Q03214 1411 aa4.33□□□□□ -1.72
SGS1YMR190C REV3P14284 1504 aa4.33□□□□□ -1.72
SGS1YMR190C SSN2P38931 1420 aa4.32□□□□□ -1.72
SGS1YMR190C YFR006WP43590 535 aa4.31□□□□□ -1.72
SGS1YMR190C HSL1P34244 1518 aa4.3□□□□□ -1.72
SGS1YMR190C SSK2P53599 1579 aa4.29□□□□□ -1.72
SGS1YMR190C GEA2P39993 1459 aaKnown RBP4.27□□□□□ -1.73
SGS1YMR190C MET5P47169 1442 aa4.27□□□□□ -1.73
SGS1YMR190C MDS3P53094 1487 aa4.27□□□□□ -1.73
SGS1YMR190C BPT1P14772 1559 aa4.26□□□□□ -1.73
SGS1YMR190C HIR3P47171 1648 aa4.23□□□□□ -1.73
SGS1YMR190C TAF2P23255 1407 aa4.21□□□□□ -1.74
SGS1YMR190C DRS2P39524 1355 aa4.2□□□□□ -1.74
SGS1YMR190C YCF1P39109 1515 aaKnown RBP4.19□□□□□ -1.74
SGS1YMR190C DNF1P32660 1571 aa4.19□□□□□ -1.74
SGS1YMR190C SIN3P22579 1536 aa4.19□□□□□ -1.74
SGS1YMR190C ESC1Q03661 1658 aaKnown RBP4.18□□□□□ -1.74
SGS1YMR190C PEP1P32319 1579 aa4.17□□□□□ -1.74
SGS1YMR190C URN1Q06525 465 aaKnown RBP4.16□□□□□ -1.74
SGS1YMR190C MMS1Q06211 1407 aa4.15□□□□□ -1.74
SGS1YMR190C MYO2P19524 1574 aaKnown RBP4.14□□□□□ -1.75
SGS1YMR190C RQC2Q12532 1038 aaKnown RBP4.12□□□□□ -1.75
SGS1YMR190C XRN1P22147 1528 aaKnown RBP4.12□□□□□ -1.75
SGS1YMR190C SKI3P17883 1432 aaKnown RBP4.1□□□□□ -1.75
SGS1YMR190C ESP1Q03018 1630 aa4.09□□□□□ -1.75
SGS1YMR190C ATG2P53855 1592 aa4.09□□□□□ -1.75
SGS1YMR190C TRM732Q03496 1420 aa4.09□□□□□ -1.75
SGS1YMR190C TRM3Q07527 1436 aa4.06□□□□□ -1.76
SGS1YMR190C YTA7P40340 1379 aa4.06□□□□□ -1.76
SGS1YMR190C RPA190P10964 1664 aaKnown RBP4.05□□□□□ -1.76
SGS1YMR190C RKR1Q04781 1562 aa4.03□□□□□ -1.76
SGS1YMR190C PRI1P10363 409 aa4.02□□□□□ -1.77
SGS1YMR190C TOP2P06786 1428 aaKnown RBP4.02□□□□□ -1.77
SGS1YMR190C YPK9Q12697 1472 aa4.01□□□□□ -1.77
SGS1YMR190C BNR1P40450 1375 aa4.01□□□□□ -1.77
SGS1YMR190C TAF7Q05021 590 aa4.01□□□□□ -1.77
SGS1YMR190C CDC25P04821 1589 aa4.01□□□□□ -1.77
SGS1YMR190C YMR196WQ04336 1088 aa4□□□□□ -1.77
SGS1YMR190C DRS1P32892 752 aaKnown RBP4□□□□□ -1.77
SGS1YMR190C CHD1P32657 1468 aa3.99□□□□□ -1.77
SGS1YMR190C TY2B-LR1P0C2J3 1770 aa3.99□□□□□ -1.77
SGS1YMR190C TY2B-FP0CX63 1770 aa3.99□□□□□ -1.77
SGS1YMR190C TY2B-GR2P0CX64 1770 aa3.99□□□□□ -1.77
SGS1YMR190C TY2B-CP25384 1770 aa3.99□□□□□ -1.77
SGS1YMR190C TY2B-DR2Q03494 1770 aa3.99□□□□□ -1.77
SGS1YMR190C TY1B-DR1Q03855 1755 aa3.99□□□□□ -1.77
SGS1YMR190C TY2B-DR3Q07791 1770 aaKnown RBP3.99□□□□□ -1.77
SGS1YMR190C TY2B-OR1Q12113 1770 aa3.99□□□□□ -1.77
SGS1YMR190C TY2B-DR1Q12472 1770 aa3.99□□□□□ -1.77
SGS1YMR190C TY2B-OR2Q12501 1770 aa3.99□□□□□ -1.77
SGS1YMR190C TY1B-DR3Q99231 1755 aa3.98□□□□□ -1.77
SGS1YMR190C UFD4P33202 1483 aa3.98□□□□□ -1.77
SGS1YMR190C STH1P32597 1359 aa3.98□□□□□ -1.77
SGS1YMR190C PAN1P32521 1480 aa3.98□□□□□ -1.77
SGS1YMR190C EDE1P34216 1381 aa3.97□□□□□ -1.77
SGS1YMR190C RTT106P40161 455 aa3.97□□□□□ -1.77
SGS1YMR190C RPO31P04051 1460 aa3.96□□□□□ -1.78
SGS1YMR190C BUD3P25558 1636 aa3.96□□□□□ -1.78
SGS1YMR190C IRC20Q06554 1556 aa3.96□□□□□ -1.78
SGS1YMR190C POL1P13382 1468 aa3.96□□□□□ -1.78
SGS1YMR190C TY2B-BQ12491 1770 aa3.96□□□□□ -1.78
SGS1YMR190C VPS15P22219 1454 aa3.95□□□□□ -1.78
SGS1YMR190C ITT1Q04638 464 aa3.95□□□□□ -1.78
SGS1YMR190C SCC2Q04002 1493 aa3.95□□□□□ -1.78
SGS1YMR190C YOR093CQ12275 1648 aa3.94□□□□□ -1.78
SGS1YMR190C TY1B-BRQ12193 1756 aa3.94□□□□□ -1.78
SGS1YMR190C TY1B-GR3Q12316 1755 aa3.94□□□□□ -1.78
SGS1YMR190C TY1B-ORQ92393 1755 aa3.94□□□□□ -1.78
SGS1YMR190C MET10P39692 1035 aa3.94□□□□□ -1.78
SGS1YMR190C TY1B-HO13535 1793 aa3.93□□□□□ -1.78
SGS1YMR190C TY1B-DR5P0C2I2 1755 aa3.93□□□□□ -1.78
SGS1YMR190C TY1B-DR6P0C2I3 1755 aa3.93□□□□□ -1.78
SGS1YMR190C TY1B-LR2P0C2I5 1755 aa3.93□□□□□ -1.78
SGS1YMR190C TY1B-LR3P0C2I6 1755 aaKnown RBP3.93□□□□□ -1.78
SGS1YMR190C TY1B-PR1P0C2I9 1755 aaKnown RBP3.93□□□□□ -1.78
SGS1YMR190C TY1B-PR2P0C2J0 1756 aa3.93□□□□□ -1.78
SGS1YMR190C TY1B-PR3P0C2J1 1755 aaKnown RBP3.93□□□□□ -1.78
SGS1YMR190C TY1B-JR1P47098 1755 aa3.93□□□□□ -1.78
SGS1YMR190C TY1B-ML2Q03434 1755 aaKnown RBP3.93□□□□□ -1.78
SGS1YMR190C TY1B-ER1Q03612 1755 aa3.93□□□□□ -1.78
SGS1YMR190C TY1B-ML1Q04711 1755 aaKnown RBP3.93□□□□□ -1.78
SGS1YMR190C TY1B-GR2Q12269 1755 aa3.93□□□□□ -1.78
SGS1YMR190C TY1B-OLQ12273 1755 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms