Protein–RNA interactions for Protein: P22438

MSM1, Methionine--tRNA ligase, mitochondrial, yeastyeast

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSM1P22438 YML009W-BYML009W-B 477 nt24.57■■□□□ 1.52
MSM1P22438 NOP1YDL014W 984 nt24.21■■□□□ 1.47
MSM1P22438 NSR1YGR159C 1245 nt23.9■■□□□ 1.42
MSM1P22438 YKL036CYKL036C 393 nt22.9■■□□□ 1.26
MSM1P22438 YJL027CYJL027C 417 nt21.49■■□□□ 1.03
MSM1P22438 Q0297Q0297 156 nt21.37■■□□□ 1.01
MSM1P22438 SCS3YGL126W 1143 nt21.12■□□□□ 0.97
MSM1P22438 SRX1YKL086W 384 nt21.12■□□□□ 0.97
MSM1P22438 MDJ1YFL016C 1536 nt20.55■□□□□ 0.88
MSM1P22438 YCR051WYCR051W 669 nt20.09■□□□□ 0.81
MSM1P22438 YOL085CYOL085C 342 nt19.8■□□□□ 0.76
MSM1P22438 SCJ1YMR214W 1134 nt19.57■□□□□ 0.72
MSM1P22438 PKP1YIL042C 1185 nt19.4■□□□□ 0.7
MSM1P22438 RPP1BYDL130W 321 nt19.17■□□□□ 0.66
MSM1P22438 ATS1YAL020C 1002 nt19.1■□□□□ 0.65
MSM1P22438 TRN1tP(UGG)A 72 nt18.69■□□□□ 0.58
MSM1P22438 SUF9tP(UGG)F 72 nt18.69■□□□□ 0.58
MSM1P22438 SUF8tP(UGG)H 72 nt18.69■□□□□ 0.58
MSM1P22438 tP(UGG)LtP(UGG)L 72 nt18.69■□□□□ 0.58
MSM1P22438 SUF7tP(UGG)M 72 nt18.69■□□□□ 0.58
MSM1P22438 tP(UGG)N1tP(UGG)N1 72 nt18.69■□□□□ 0.58
MSM1P22438 tP(UGG)N2tP(UGG)N2 72 nt18.69■□□□□ 0.58
MSM1P22438 tP(UGG)O1tP(UGG)O1 72 nt18.69■□□□□ 0.58
MSM1P22438 SUF11tP(UGG)O2 72 nt18.69■□□□□ 0.58
MSM1P22438 CCC1YLR220W 969 nt18.54■□□□□ 0.56
MSM1P22438 DBP2YNL112W 1641 nt18.43■□□□□ 0.54
MSM1P22438 SCR1SCR1 522 nt18.26■□□□□ 0.51
MSM1P22438 PET122YER153C 765 nt18.2■□□□□ 0.5
MSM1P22438 tP(UGG)O3tP(UGG)O3 72 nt17.91■□□□□ 0.46
MSM1P22438 RRN5YLR141W 1092 nt17.78■□□□□ 0.44
MSM1P22438 RTC3YHR087W 336 nt17.76■□□□□ 0.43
MSM1P22438 RSB1YOR049C 1065 nt17.61■□□□□ 0.41
MSM1P22438 PST2YDR032C 597 nt17.58■□□□□ 0.4
MSM1P22438 RVS167YDR388W 1449 nt17.56■□□□□ 0.4
MSM1P22438 YER088W-BYER088W-B 147 nt17.42■□□□□ 0.38
MSM1P22438 YBR190WYBR190W 312 nt17.41■□□□□ 0.38
MSM1P22438 YDJ1YNL064C 1230 nt17.33■□□□□ 0.36
MSM1P22438 YKL097CYKL097C 411 nt17.23■□□□□ 0.35
MSM1P22438 SHR5YOL110W 714 nt17.07■□□□□ 0.32
MSM1P22438 GAR1YHR089C 618 nt16.83■□□□□ 0.28
MSM1P22438 SHU1YHL006C 453 nt16.69■□□□□ 0.26
MSM1P22438 YOR139CYOR139C 393 nt16.37■□□□□ 0.21
MSM1P22438 DEP1YAL013W 1218 nt16.36■□□□□ 0.21
MSM1P22438 TIR1YER011W 765 nt16.25■□□□□ 0.19
MSM1P22438 YAL037C-BYAL037C-B 975 nt16.24■□□□□ 0.19
MSM1P22438 YNL208WYNL208W 600 nt16.2■□□□□ 0.18
MSM1P22438 URN1YPR152C 1398 nt16.19■□□□□ 0.18
MSM1P22438 NPL3YDR432W 1245 nt16.15■□□□□ 0.18
MSM1P22438 RPN10YHR200W 807 nt16.15■□□□□ 0.18
MSM1P22438 SSA1YAL005C 1929 nt15.88■□□□□ 0.13
MSM1P22438 OPI9YLR338W 858 nt15.83■□□□□ 0.12
MSM1P22438 YGR021WYGR021W 873 nt15.76■□□□□ 0.11
MSM1P22438 YOL037CYOL037C 354 nt15.74■□□□□ 0.11
MSM1P22438 tM(CAU)CtM(CAU)C 72 nt15.72■□□□□ 0.11
MSM1P22438 IMT4tM(CAU)E 72 nt15.72■□□□□ 0.11
MSM1P22438 IMT3tM(CAU)J3 72 nt15.72■□□□□ 0.11
MSM1P22438 IMT1tM(CAU)O1 72 nt15.72■□□□□ 0.11
MSM1P22438 IMT2tM(CAU)P 72 nt15.72■□□□□ 0.11
MSM1P22438 HOM6YJR139C 1080 nt15.7■□□□□ 0.1
MSM1P22438 MNP1YGL068W 585 nt15.69■□□□□ 0.1
MSM1P22438 SRB2YHR041C 633 nt15.68■□□□□ 0.1
MSM1P22438 WWM1YFL010C 636 nt15.63■□□□□ 0.09
MSM1P22438 SAH1YER043C 1350 nt15.55■□□□□ 0.08
MSM1P22438 YJR018WYJR018W 363 nt15.51■□□□□ 0.07
MSM1P22438 RKM5YLR137W 1104 nt15.48■□□□□ 0.07
MSM1P22438 RPP2BYDR382W 333 nt15.4■□□□□ 0.06
MSM1P22438 PUN1YLR414C 792 nt15.4■□□□□ 0.06
MSM1P22438 YFL021C-AYFL021C-A 855 nt15.38■□□□□ 0.05
MSM1P22438 PUS2YGL063W 1113 nt15.38■□□□□ 0.05
MSM1P22438 MOT3YMR070W 1473 nt15.35■□□□□ 0.05
MSM1P22438 YLR281CYLR281C 468 nt15.33■□□□□ 0.04
MSM1P22438 YJR120WYJR120W 351 nt15.32■□□□□ 0.04
MSM1P22438 BSC6YOL137W 1494 nt15.3■□□□□ 0.04
MSM1P22438 PUT4YOR348C 1884 nt15.26■□□□□ 0.03
MSM1P22438 ARE1YCR048W 1833 nt15.19■□□□□ 0.02
MSM1P22438 WHI5YOR083W 888 nt15.18■□□□□ 0.02
MSM1P22438 BDH2YAL061W 1254 nt15.17■□□□□ 0.02
MSM1P22438 SSA3YBL075C 1950 nt15.13■□□□□ 0.01
MSM1P22438 LSM3YLR438C-A 270 nt15.12■□□□□ 0.01
MSM1P22438 PTC2YER089C 1395 nt15.08■□□□□ 0
MSM1P22438 MRPL8YJL063C 717 nt15.02■□□□□ -0
MSM1P22438 YHR049C-AYHR049C-A 297 nt14.99□□□□□ -0.01
MSM1P22438 FMP45YDL222C 930 nt14.98□□□□□ -0.01
MSM1P22438 DSK2YMR276W 1122 nt14.93□□□□□ -0.02
MSM1P22438 INM2YDR287W 879 nt14.91□□□□□ -0.02
MSM1P22438 YCH1YGR203W 447 nt14.89□□□□□ -0.03
MSM1P22438 IMP2'YIL154C 1041 nt14.89□□□□□ -0.03
MSM1P22438 POA1YBR022W 534 nt14.88□□□□□ -0.03
MSM1P22438 YPR011CYPR011C 981 nt14.88□□□□□ -0.03
MSM1P22438 YBL100CYBL100C 315 nt14.82□□□□□ -0.04
MSM1P22438 TRM9YML014W 840 nt14.81□□□□□ -0.04
MSM1P22438 NAB2YGL122C 1578 nt14.81□□□□□ -0.04
MSM1P22438 ADO1YJR105W 1023 nt14.79□□□□□ -0.04
MSM1P22438 YLR236CYLR236C 324 nt14.79□□□□□ -0.04
MSM1P22438 BUD23YCR047C 828 nt14.74□□□□□ -0.05
MSM1P22438 DAL1YIR027C 1383 nt14.73□□□□□ -0.05
MSM1P22438 YLR154C-GYLR154C-G 150 nt14.72□□□□□ -0.05
MSM1P22438 FPR4YLR449W 1179 nt14.72□□□□□ -0.05
MSM1P22438 UBX6YJL048C 1191 nt14.67□□□□□ -0.06
MSM1P22438 FUN26YAL022C 1554 nt14.67□□□□□ -0.06
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms