Protein–RNA interactions for Protein: P53893

RIA1, Ribosome assembly protein 1, yeastyeast

Predictions only

Length 1,110 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIA1P53893 YML009W-BYML009W-B 477 nt28.47■■■□□ 2.15
RIA1P53893 NOP1YDL014W 984 nt27.86■■■□□ 2.05
RIA1P53893 NSR1YGR159C 1245 nt27.71■■■□□ 2.03
RIA1P53893 YKL036CYKL036C 393 nt26.35■■□□□ 1.81
RIA1P53893 YJL027CYJL027C 417 nt24.72■■□□□ 1.55
RIA1P53893 Q0297Q0297 156 nt24.65■■□□□ 1.54
RIA1P53893 SRX1YKL086W 384 nt24.4■■□□□ 1.5
RIA1P53893 SCS3YGL126W 1143 nt24.34■■□□□ 1.49
RIA1P53893 MDJ1YFL016C 1536 nt24.09■■□□□ 1.45
RIA1P53893 YCR051WYCR051W 669 nt23.2■■□□□ 1.3
RIA1P53893 YOL085CYOL085C 342 nt22.84■■□□□ 1.25
RIA1P53893 PKP1YIL042C 1185 nt22.45■■□□□ 1.18
RIA1P53893 SCJ1YMR214W 1134 nt22.29■■□□□ 1.16
RIA1P53893 RPP1BYDL130W 321 nt22.12■■□□□ 1.13
RIA1P53893 ATS1YAL020C 1002 nt21.93■■□□□ 1.1
RIA1P53893 TRN1tP(UGG)A 72 nt21.72■■□□□ 1.07
RIA1P53893 SUF9tP(UGG)F 72 nt21.72■■□□□ 1.07
RIA1P53893 SUF8tP(UGG)H 72 nt21.72■■□□□ 1.07
RIA1P53893 tP(UGG)LtP(UGG)L 72 nt21.72■■□□□ 1.07
RIA1P53893 SUF7tP(UGG)M 72 nt21.72■■□□□ 1.07
RIA1P53893 tP(UGG)N1tP(UGG)N1 72 nt21.72■■□□□ 1.07
RIA1P53893 tP(UGG)N2tP(UGG)N2 72 nt21.72■■□□□ 1.07
RIA1P53893 tP(UGG)O1tP(UGG)O1 72 nt21.72■■□□□ 1.07
RIA1P53893 SUF11tP(UGG)O2 72 nt21.72■■□□□ 1.07
RIA1P53893 DBP2YNL112W 1641 nt21.58■■□□□ 1.04
RIA1P53893 CCC1YLR220W 969 nt21.5■■□□□ 1.03
RIA1P53893 PET122YER153C 765 nt21.1■□□□□ 0.97
RIA1P53893 SCR1SCR1 522 nt20.97■□□□□ 0.95
RIA1P53893 tP(UGG)O3tP(UGG)O3 72 nt20.75■□□□□ 0.91
RIA1P53893 RRN5YLR141W 1092 nt20.55■□□□□ 0.88
RIA1P53893 RTC3YHR087W 336 nt20.32■□□□□ 0.84
RIA1P53893 RVS167YDR388W 1449 nt20.32■□□□□ 0.84
RIA1P53893 YBR190WYBR190W 312 nt20.31■□□□□ 0.84
RIA1P53893 RSB1YOR049C 1065 nt20.29■□□□□ 0.84
RIA1P53893 PST2YDR032C 597 nt20.22■□□□□ 0.83
RIA1P53893 YER088W-BYER088W-B 147 nt20.15■□□□□ 0.82
RIA1P53893 YDJ1YNL064C 1230 nt20.04■□□□□ 0.8
RIA1P53893 SHR5YOL110W 714 nt19.81■□□□□ 0.76
RIA1P53893 YKL097CYKL097C 411 nt19.73■□□□□ 0.75
RIA1P53893 GAR1YHR089C 618 nt19.53■□□□□ 0.72
RIA1P53893 SHU1YHL006C 453 nt19.27■□□□□ 0.68
RIA1P53893 DEP1YAL013W 1218 nt19.08■□□□□ 0.64
RIA1P53893 YOR139CYOR139C 393 nt18.88■□□□□ 0.61
RIA1P53893 URN1YPR152C 1398 nt18.88■□□□□ 0.61
RIA1P53893 TIR1YER011W 765 nt18.83■□□□□ 0.6
RIA1P53893 YNL208WYNL208W 600 nt18.8■□□□□ 0.6
RIA1P53893 YAL037C-BYAL037C-B 975 nt18.79■□□□□ 0.6
RIA1P53893 RPN10YHR200W 807 nt18.69■□□□□ 0.58
RIA1P53893 NPL3YDR432W 1245 nt18.51■□□□□ 0.55
RIA1P53893 SSA1YAL005C 1929 nt18.5■□□□□ 0.55
RIA1P53893 OPI9YLR338W 858 nt18.47■□□□□ 0.55
RIA1P53893 SRB2YHR041C 633 nt18.39■□□□□ 0.53
RIA1P53893 MNP1YGL068W 585 nt18.22■□□□□ 0.51
RIA1P53893 SAH1YER043C 1350 nt18.21■□□□□ 0.51
RIA1P53893 HOM6YJR139C 1080 nt18.19■□□□□ 0.5
RIA1P53893 YGR021WYGR021W 873 nt18.15■□□□□ 0.5
RIA1P53893 WWM1YFL010C 636 nt18.14■□□□□ 0.49
RIA1P53893 YOL037CYOL037C 354 nt18.1■□□□□ 0.49
RIA1P53893 tM(CAU)CtM(CAU)C 72 nt18.08■□□□□ 0.48
RIA1P53893 IMT4tM(CAU)E 72 nt18.08■□□□□ 0.48
RIA1P53893 IMT3tM(CAU)J3 72 nt18.08■□□□□ 0.48
RIA1P53893 IMT1tM(CAU)O1 72 nt18.08■□□□□ 0.48
RIA1P53893 IMT2tM(CAU)P 72 nt18.08■□□□□ 0.48
RIA1P53893 YJR018WYJR018W 363 nt18.04■□□□□ 0.48
RIA1P53893 YJR120WYJR120W 351 nt17.99■□□□□ 0.47
RIA1P53893 PUT4YOR348C 1884 nt17.99■□□□□ 0.47
RIA1P53893 PUN1YLR414C 792 nt17.92■□□□□ 0.46
RIA1P53893 RKM5YLR137W 1104 nt17.91■□□□□ 0.46
RIA1P53893 ARE1YCR048W 1833 nt17.87■□□□□ 0.45
RIA1P53893 RPP2BYDR382W 333 nt17.8■□□□□ 0.44
RIA1P53893 YFL021C-AYFL021C-A 855 nt17.79■□□□□ 0.44
RIA1P53893 SSA3YBL075C 1950 nt17.75■□□□□ 0.43
RIA1P53893 PUS2YGL063W 1113 nt17.7■□□□□ 0.42
RIA1P53893 YLR281CYLR281C 468 nt17.66■□□□□ 0.42
RIA1P53893 YHR049C-AYHR049C-A 297 nt17.63■□□□□ 0.41
RIA1P53893 MOT3YMR070W 1473 nt17.63■□□□□ 0.41
RIA1P53893 PTC2YER089C 1395 nt17.62■□□□□ 0.41
RIA1P53893 BDH2YAL061W 1254 nt17.59■□□□□ 0.41
RIA1P53893 WHI5YOR083W 888 nt17.51■□□□□ 0.39
RIA1P53893 POA1YBR022W 534 nt17.48■□□□□ 0.39
RIA1P53893 LSM3YLR438C-A 270 nt17.47■□□□□ 0.39
RIA1P53893 BSC6YOL137W 1494 nt17.34■□□□□ 0.37
RIA1P53893 YPR011CYPR011C 981 nt17.3■□□□□ 0.36
RIA1P53893 INM2YDR287W 879 nt17.29■□□□□ 0.36
RIA1P53893 FMP45YDL222C 930 nt17.27■□□□□ 0.36
RIA1P53893 NAB2YGL122C 1578 nt17.27■□□□□ 0.35
RIA1P53893 BUD23YCR047C 828 nt17.26■□□□□ 0.35
RIA1P53893 YBL100CYBL100C 315 nt17.25■□□□□ 0.35
RIA1P53893 DSK2YMR276W 1122 nt17.2■□□□□ 0.34
RIA1P53893 YLR236CYLR236C 324 nt17.19■□□□□ 0.34
RIA1P53893 DAL1YIR027C 1383 nt17.18■□□□□ 0.34
RIA1P53893 FPR4YLR449W 1179 nt17.16■□□□□ 0.34
RIA1P53893 FIS1YIL065C 468 nt17.15■□□□□ 0.34
RIA1P53893 TRM9YML014W 840 nt17.13■□□□□ 0.33
RIA1P53893 MRPL8YJL063C 717 nt17.12■□□□□ 0.33
RIA1P53893 YCH1YGR203W 447 nt17.11■□□□□ 0.33
RIA1P53893 FUN26YAL022C 1554 nt17.08■□□□□ 0.32
RIA1P53893 IMP2'YIL154C 1041 nt17.05■□□□□ 0.32
RIA1P53893 YLR154C-GYLR154C-G 150 nt17.04■□□□□ 0.32
RIA1P53893 PHO4YFR034C 939 nt17.03■□□□□ 0.32
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms