Protein–RNA interactions for Protein: P47104

RAV1, Regulator of V-ATPase in vacuolar membrane protein 1, yeastyeast

Predictions only

Length 1,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAV1P47104 YML009W-BYML009W-B 477 nt29.04■■■□□ 2.24
RAV1P47104 NSR1YGR159C 1245 nt28.27■■■□□ 2.12
RAV1P47104 NOP1YDL014W 984 nt28.12■■■□□ 2.09
RAV1P47104 YKL036CYKL036C 393 nt26.35■■□□□ 1.81
RAV1P47104 MDJ1YFL016C 1536 nt25.1■■□□□ 1.61
RAV1P47104 Q0297Q0297 156 nt24.73■■□□□ 1.55
RAV1P47104 YJL027CYJL027C 417 nt24.73■■□□□ 1.55
RAV1P47104 SRX1YKL086W 384 nt24.62■■□□□ 1.53
RAV1P47104 SCS3YGL126W 1143 nt24.26■■□□□ 1.47
RAV1P47104 YCR051WYCR051W 669 nt23.52■■□□□ 1.36
RAV1P47104 YOL085CYOL085C 342 nt22.81■■□□□ 1.24
RAV1P47104 PKP1YIL042C 1185 nt22.62■■□□□ 1.21
RAV1P47104 RPP1BYDL130W 321 nt22.24■■□□□ 1.15
RAV1P47104 DBP2YNL112W 1641 nt22.2■■□□□ 1.15
RAV1P47104 TRN1tP(UGG)A 72 nt22.12■■□□□ 1.13
RAV1P47104 SUF9tP(UGG)F 72 nt22.12■■□□□ 1.13
RAV1P47104 SUF8tP(UGG)H 72 nt22.12■■□□□ 1.13
RAV1P47104 tP(UGG)LtP(UGG)L 72 nt22.12■■□□□ 1.13
RAV1P47104 SUF7tP(UGG)M 72 nt22.12■■□□□ 1.13
RAV1P47104 tP(UGG)N1tP(UGG)N1 72 nt22.12■■□□□ 1.13
RAV1P47104 tP(UGG)N2tP(UGG)N2 72 nt22.12■■□□□ 1.13
RAV1P47104 tP(UGG)O1tP(UGG)O1 72 nt22.12■■□□□ 1.13
RAV1P47104 SUF11tP(UGG)O2 72 nt22.12■■□□□ 1.13
RAV1P47104 CCC1YLR220W 969 nt22.02■■□□□ 1.12
RAV1P47104 ATS1YAL020C 1002 nt21.69■■□□□ 1.06
RAV1P47104 SCJ1YMR214W 1134 nt21.64■■□□□ 1.06
RAV1P47104 PET122YER153C 765 nt21.34■■□□□ 1.01
RAV1P47104 SCR1SCR1 522 nt21.09■□□□□ 0.97
RAV1P47104 YBR190WYBR190W 312 nt21.07■□□□□ 0.96
RAV1P47104 tP(UGG)O3tP(UGG)O3 72 nt21.03■□□□□ 0.96
RAV1P47104 RVS167YDR388W 1449 nt20.92■□□□□ 0.94
RAV1P47104 RTC3YHR087W 336 nt20.78■□□□□ 0.92
RAV1P47104 RRN5YLR141W 1092 nt20.68■□□□□ 0.9
RAV1P47104 RSB1YOR049C 1065 nt20.45■□□□□ 0.86
RAV1P47104 YER088W-BYER088W-B 147 nt20.28■□□□□ 0.84
RAV1P47104 SHR5YOL110W 714 nt20.27■□□□□ 0.84
RAV1P47104 YDJ1YNL064C 1230 nt20.22■□□□□ 0.83
RAV1P47104 PST2YDR032C 597 nt19.98■□□□□ 0.79
RAV1P47104 GAR1YHR089C 618 nt19.91■□□□□ 0.78
RAV1P47104 DEP1YAL013W 1218 nt19.78■□□□□ 0.76
RAV1P47104 URN1YPR152C 1398 nt19.58■□□□□ 0.72
RAV1P47104 YKL097CYKL097C 411 nt19.48■□□□□ 0.71
RAV1P47104 YNL208WYNL208W 600 nt19.3■□□□□ 0.68
RAV1P47104 RPN10YHR200W 807 nt19.26■□□□□ 0.67
RAV1P47104 SHU1YHL006C 453 nt19.21■□□□□ 0.67
RAV1P47104 TIR1YER011W 765 nt19.17■□□□□ 0.66
RAV1P47104 OPI9YLR338W 858 nt19.11■□□□□ 0.65
RAV1P47104 SAH1YER043C 1350 nt19.02■□□□□ 0.64
RAV1P47104 YAL037C-BYAL037C-B 975 nt18.92■□□□□ 0.62
RAV1P47104 PUT4YOR348C 1884 nt18.92■□□□□ 0.62
RAV1P47104 SSA1YAL005C 1929 nt18.9■□□□□ 0.62
RAV1P47104 SRB2YHR041C 633 nt18.77■□□□□ 0.6
RAV1P47104 ARE1YCR048W 1833 nt18.72■□□□□ 0.59
RAV1P47104 YOR139CYOR139C 393 nt18.66■□□□□ 0.58
RAV1P47104 YJR018WYJR018W 363 nt18.64■□□□□ 0.57
RAV1P47104 YHR049C-AYHR049C-A 297 nt18.59■□□□□ 0.57
RAV1P47104 PUN1YLR414C 792 nt18.55■□□□□ 0.56
RAV1P47104 YJR120WYJR120W 351 nt18.5■□□□□ 0.55
RAV1P47104 MNP1YGL068W 585 nt18.48■□□□□ 0.55
RAV1P47104 WWM1YFL010C 636 nt18.45■□□□□ 0.54
RAV1P47104 POA1YBR022W 534 nt18.43■□□□□ 0.54
RAV1P47104 NPL3YDR432W 1245 nt18.42■□□□□ 0.54
RAV1P47104 PTC2YER089C 1395 nt18.35■□□□□ 0.53
RAV1P47104 RPP2BYDR382W 333 nt18.33■□□□□ 0.53
RAV1P47104 HOM6YJR139C 1080 nt18.33■□□□□ 0.53
RAV1P47104 YGR021WYGR021W 873 nt18.32■□□□□ 0.52
RAV1P47104 BUD23YCR047C 828 nt18.21■□□□□ 0.51
RAV1P47104 YOL037CYOL037C 354 nt18.1■□□□□ 0.49
RAV1P47104 RKM5YLR137W 1104 nt18.08■□□□□ 0.49
RAV1P47104 YFL021C-AYFL021C-A 855 nt18.03■□□□□ 0.48
RAV1P47104 BDH2YAL061W 1254 nt18.02■□□□□ 0.47
RAV1P47104 BSC6YOL137W 1494 nt17.98■□□□□ 0.47
RAV1P47104 NAB2YGL122C 1578 nt17.97■□□□□ 0.47
RAV1P47104 FPR4YLR449W 1179 nt17.97■□□□□ 0.47
RAV1P47104 SSA3YBL075C 1950 nt17.97■□□□□ 0.47
RAV1P47104 FIS1YIL065C 468 nt17.91■□□□□ 0.46
RAV1P47104 YBL100CYBL100C 315 nt17.87■□□□□ 0.45
RAV1P47104 DAL1YIR027C 1383 nt17.84■□□□□ 0.45
RAV1P47104 tM(CAU)CtM(CAU)C 72 nt17.81■□□□□ 0.44
RAV1P47104 IMT4tM(CAU)E 72 nt17.81■□□□□ 0.44
RAV1P47104 IMT3tM(CAU)J3 72 nt17.81■□□□□ 0.44
RAV1P47104 IMT1tM(CAU)O1 72 nt17.81■□□□□ 0.44
RAV1P47104 IMT2tM(CAU)P 72 nt17.81■□□□□ 0.44
RAV1P47104 INM2YDR287W 879 nt17.8■□□□□ 0.44
RAV1P47104 PHO4YFR034C 939 nt17.76■□□□□ 0.43
RAV1P47104 LSM3YLR438C-A 270 nt17.73■□□□□ 0.43
RAV1P47104 PUS2YGL063W 1113 nt17.66■□□□□ 0.42
RAV1P47104 YLR281CYLR281C 468 nt17.64■□□□□ 0.41
RAV1P47104 FUN26YAL022C 1554 nt17.63■□□□□ 0.41
RAV1P47104 TRM9YML014W 840 nt17.59■□□□□ 0.41
RAV1P47104 WHI5YOR083W 888 nt17.58■□□□□ 0.4
RAV1P47104 CCT6YDR188W 1641 nt17.39■□□□□ 0.37
RAV1P47104 MOT3YMR070W 1473 nt17.34■□□□□ 0.37
RAV1P47104 YLR236CYLR236C 324 nt17.33■□□□□ 0.36
RAV1P47104 ALF1YNL148C 765 nt17.32■□□□□ 0.36
RAV1P47104 YLR154C-GYLR154C-G 150 nt17.31■□□□□ 0.36
RAV1P47104 FMP45YDL222C 930 nt17.29■□□□□ 0.36
RAV1P47104 YPR011CYPR011C 981 nt17.28■□□□□ 0.36
RAV1P47104 DSK2YMR276W 1122 nt17.27■□□□□ 0.35
RAV1P47104 SUF2tP(AGG)C 72 nt17.21■□□□□ 0.35
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms