Protein–RNA interactions for Protein: P25386

USO1, Intracellular protein transport protein USO1, yeastyeast

Predictions only

Length 1,790 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USO1P25386 YML009W-BYML009W-B 477 nt29.15■■■□□ 2.26
USO1P25386 NOP1YDL014W 984 nt28.03■■■□□ 2.08
USO1P25386 NSR1YGR159C 1245 nt27.6■■■□□ 2.01
USO1P25386 YKL036CYKL036C 393 nt27.19■■□□□ 1.94
USO1P25386 SCS3YGL126W 1143 nt25.46■■□□□ 1.67
USO1P25386 YJL027CYJL027C 417 nt25.44■■□□□ 1.66
USO1P25386 Q0297Q0297 156 nt25.21■■□□□ 1.63
USO1P25386 SRX1YKL086W 384 nt25.06■■□□□ 1.6
USO1P25386 MDJ1YFL016C 1536 nt24.17■■□□□ 1.46
USO1P25386 YCR051WYCR051W 669 nt23.75■■□□□ 1.39
USO1P25386 SCJ1YMR214W 1134 nt23.35■■□□□ 1.33
USO1P25386 YOL085CYOL085C 342 nt23.32■■□□□ 1.32
USO1P25386 PKP1YIL042C 1185 nt23.18■■□□□ 1.3
USO1P25386 ATS1YAL020C 1002 nt22.71■■□□□ 1.23
USO1P25386 RPP1BYDL130W 321 nt22.52■■□□□ 1.2
USO1P25386 TRN1tP(UGG)A 72 nt22.17■■□□□ 1.14
USO1P25386 SUF9tP(UGG)F 72 nt22.17■■□□□ 1.14
USO1P25386 SUF8tP(UGG)H 72 nt22.17■■□□□ 1.14
USO1P25386 tP(UGG)LtP(UGG)L 72 nt22.17■■□□□ 1.14
USO1P25386 SUF7tP(UGG)M 72 nt22.17■■□□□ 1.14
USO1P25386 tP(UGG)N1tP(UGG)N1 72 nt22.17■■□□□ 1.14
USO1P25386 tP(UGG)N2tP(UGG)N2 72 nt22.17■■□□□ 1.14
USO1P25386 tP(UGG)O1tP(UGG)O1 72 nt22.17■■□□□ 1.14
USO1P25386 SUF11tP(UGG)O2 72 nt22.17■■□□□ 1.14
USO1P25386 DBP2YNL112W 1641 nt21.74■■□□□ 1.07
USO1P25386 CCC1YLR220W 969 nt21.71■■□□□ 1.07
USO1P25386 PET122YER153C 765 nt21.69■■□□□ 1.06
USO1P25386 SCR1SCR1 522 nt21.45■■□□□ 1.02
USO1P25386 RTC3YHR087W 336 nt21.41■■□□□ 1.02
USO1P25386 tP(UGG)O3tP(UGG)O3 72 nt21.11■□□□□ 0.97
USO1P25386 RSB1YOR049C 1065 nt20.96■□□□□ 0.95
USO1P25386 RRN5YLR141W 1092 nt20.94■□□□□ 0.94
USO1P25386 PST2YDR032C 597 nt20.87■□□□□ 0.93
USO1P25386 YKL097CYKL097C 411 nt20.69■□□□□ 0.9
USO1P25386 YER088W-BYER088W-B 147 nt20.57■□□□□ 0.88
USO1P25386 RVS167YDR388W 1449 nt20.33■□□□□ 0.84
USO1P25386 YDJ1YNL064C 1230 nt20.23■□□□□ 0.83
USO1P25386 SHU1YHL006C 453 nt20.03■□□□□ 0.8
USO1P25386 YBR190WYBR190W 312 nt19.96■□□□□ 0.79
USO1P25386 SHR5YOL110W 714 nt19.95■□□□□ 0.78
USO1P25386 YOR139CYOR139C 393 nt19.9■□□□□ 0.78
USO1P25386 GAR1YHR089C 618 nt19.76■□□□□ 0.75
USO1P25386 YAL037C-BYAL037C-B 975 nt19.59■□□□□ 0.73
USO1P25386 NPL3YDR432W 1245 nt19.3■□□□□ 0.68
USO1P25386 DEP1YAL013W 1218 nt19.29■□□□□ 0.68
USO1P25386 TIR1YER011W 765 nt19.03■□□□□ 0.64
USO1P25386 MNP1YGL068W 585 nt19.01■□□□□ 0.63
USO1P25386 URN1YPR152C 1398 nt18.97■□□□□ 0.63
USO1P25386 SRB2YHR041C 633 nt18.91■□□□□ 0.62
USO1P25386 YOL037CYOL037C 354 nt18.76■□□□□ 0.59
USO1P25386 RPN10YHR200W 807 nt18.71■□□□□ 0.59
USO1P25386 SSA1YAL005C 1929 nt18.71■□□□□ 0.59
USO1P25386 YNL208WYNL208W 600 nt18.7■□□□□ 0.58
USO1P25386 tM(CAU)CtM(CAU)C 72 nt18.68■□□□□ 0.58
USO1P25386 IMT4tM(CAU)E 72 nt18.68■□□□□ 0.58
USO1P25386 IMT3tM(CAU)J3 72 nt18.68■□□□□ 0.58
USO1P25386 IMT1tM(CAU)O1 72 nt18.68■□□□□ 0.58
USO1P25386 IMT2tM(CAU)P 72 nt18.68■□□□□ 0.58
USO1P25386 HOM6YJR139C 1080 nt18.67■□□□□ 0.58
USO1P25386 WWM1YFL010C 636 nt18.6■□□□□ 0.57
USO1P25386 YGR021WYGR021W 873 nt18.53■□□□□ 0.56
USO1P25386 MOT3YMR070W 1473 nt18.52■□□□□ 0.56
USO1P25386 BSC6YOL137W 1494 nt18.45■□□□□ 0.54
USO1P25386 YJR120WYJR120W 351 nt18.35■□□□□ 0.53
USO1P25386 PUS2YGL063W 1113 nt18.32■□□□□ 0.52
USO1P25386 OPI9YLR338W 858 nt18.31■□□□□ 0.52
USO1P25386 RKM5YLR137W 1104 nt18.27■□□□□ 0.51
USO1P25386 YLR281CYLR281C 468 nt18.15■□□□□ 0.5
USO1P25386 SAH1YER043C 1350 nt18.12■□□□□ 0.49
USO1P25386 SSA3YBL075C 1950 nt18.11■□□□□ 0.49
USO1P25386 YFL021C-AYFL021C-A 855 nt18.09■□□□□ 0.49
USO1P25386 YJR018WYJR018W 363 nt18.03■□□□□ 0.48
USO1P25386 WHI5YOR083W 888 nt18.02■□□□□ 0.47
USO1P25386 MRPL8YJL063C 717 nt17.97■□□□□ 0.47
USO1P25386 FMP45YDL222C 930 nt17.96■□□□□ 0.47
USO1P25386 YLR236CYLR236C 324 nt17.96■□□□□ 0.47
USO1P25386 YPR011CYPR011C 981 nt17.92■□□□□ 0.46
USO1P25386 UBX6YJL048C 1191 nt17.91■□□□□ 0.46
USO1P25386 BDH2YAL061W 1254 nt17.76■□□□□ 0.43
USO1P25386 RTG1YOL067C 534 nt17.76■□□□□ 0.43
USO1P25386 RPP2BYDR382W 333 nt17.74■□□□□ 0.43
USO1P25386 DSK2YMR276W 1122 nt17.73■□□□□ 0.43
USO1P25386 PUN1YLR414C 792 nt17.71■□□□□ 0.43
USO1P25386 ADO1YJR105W 1023 nt17.69■□□□□ 0.42
USO1P25386 PUT4YOR348C 1884 nt17.69■□□□□ 0.42
USO1P25386 ARE1YCR048W 1833 nt17.68■□□□□ 0.42
USO1P25386 YEL076C-AYEL076C-A 651 nt17.66■□□□□ 0.42
USO1P25386 YEL076CYEL076C 651 nt17.66■□□□□ 0.42
USO1P25386 YLR464WYLR464W 651 nt17.66■□□□□ 0.42
USO1P25386 YCH1YGR203W 447 nt17.63■□□□□ 0.41
USO1P25386 YHR049C-AYHR049C-A 297 nt17.63■□□□□ 0.41
USO1P25386 IMP2'YIL154C 1041 nt17.56■□□□□ 0.4
USO1P25386 LPX1YOR084W 1164 nt17.56■□□□□ 0.4
USO1P25386 SPP1YPL138C 1062 nt17.5■□□□□ 0.39
USO1P25386 YLR154C-GYLR154C-G 150 nt17.44■□□□□ 0.38
USO1P25386 YDR094WYDR094W 336 nt17.4■□□□□ 0.38
USO1P25386 YFL015W-AYFL015W-A 318 nt17.39■□□□□ 0.37
USO1P25386 ERV46YAL042W 1248 nt17.38■□□□□ 0.37
USO1P25386 LSM3YLR438C-A 270 nt17.35■□□□□ 0.37
USO1P25386 PTC2YER089C 1395 nt17.32■□□□□ 0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms