Protein–RNA interactions for Protein: Q08281

RTC1, Restriction of telomere capping protein 1, yeastyeast

Predictions only

Length 1,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTC1Q08281 YML009W-BYML009W-B 477 nt28.84■■■□□ 2.21
RTC1Q08281 NSR1YGR159C 1245 nt28.18■■■□□ 2.1
RTC1Q08281 NOP1YDL014W 984 nt27.98■■■□□ 2.07
RTC1Q08281 YKL036CYKL036C 393 nt26.17■■□□□ 1.78
RTC1Q08281 MDJ1YFL016C 1536 nt24.96■■□□□ 1.59
RTC1Q08281 Q0297Q0297 156 nt24.59■■□□□ 1.53
RTC1Q08281 YJL027CYJL027C 417 nt24.55■■□□□ 1.52
RTC1Q08281 SRX1YKL086W 384 nt24.47■■□□□ 1.51
RTC1Q08281 SCS3YGL126W 1143 nt24.04■■□□□ 1.44
RTC1Q08281 YCR051WYCR051W 669 nt23.38■■□□□ 1.33
RTC1Q08281 YOL085CYOL085C 342 nt22.67■■□□□ 1.22
RTC1Q08281 PKP1YIL042C 1185 nt22.45■■□□□ 1.18
RTC1Q08281 RPP1BYDL130W 321 nt22.1■■□□□ 1.13
RTC1Q08281 DBP2YNL112W 1641 nt22.1■■□□□ 1.13
RTC1Q08281 TRN1tP(UGG)A 72 nt21.98■■□□□ 1.11
RTC1Q08281 SUF9tP(UGG)F 72 nt21.98■■□□□ 1.11
RTC1Q08281 SUF8tP(UGG)H 72 nt21.98■■□□□ 1.11
RTC1Q08281 tP(UGG)LtP(UGG)L 72 nt21.98■■□□□ 1.11
RTC1Q08281 SUF7tP(UGG)M 72 nt21.98■■□□□ 1.11
RTC1Q08281 tP(UGG)N1tP(UGG)N1 72 nt21.98■■□□□ 1.11
RTC1Q08281 tP(UGG)N2tP(UGG)N2 72 nt21.98■■□□□ 1.11
RTC1Q08281 tP(UGG)O1tP(UGG)O1 72 nt21.98■■□□□ 1.11
RTC1Q08281 SUF11tP(UGG)O2 72 nt21.98■■□□□ 1.11
RTC1Q08281 CCC1YLR220W 969 nt21.9■■□□□ 1.1
RTC1Q08281 ATS1YAL020C 1002 nt21.54■■□□□ 1.04
RTC1Q08281 SCJ1YMR214W 1134 nt21.47■■□□□ 1.03
RTC1Q08281 PET122YER153C 765 nt21.18■□□□□ 0.98
RTC1Q08281 YBR190WYBR190W 312 nt21.01■□□□□ 0.95
RTC1Q08281 SCR1SCR1 522 nt20.96■□□□□ 0.95
RTC1Q08281 tP(UGG)O3tP(UGG)O3 72 nt20.92■□□□□ 0.94
RTC1Q08281 RVS167YDR388W 1449 nt20.82■□□□□ 0.92
RTC1Q08281 RTC3YHR087W 336 nt20.72■□□□□ 0.91
RTC1Q08281 RRN5YLR141W 1092 nt20.57■□□□□ 0.88
RTC1Q08281 RSB1YOR049C 1065 nt20.29■□□□□ 0.84
RTC1Q08281 YER088W-BYER088W-B 147 nt20.16■□□□□ 0.82
RTC1Q08281 SHR5YOL110W 714 nt20.16■□□□□ 0.82
RTC1Q08281 YDJ1YNL064C 1230 nt20.12■□□□□ 0.81
RTC1Q08281 PST2YDR032C 597 nt19.85■□□□□ 0.77
RTC1Q08281 GAR1YHR089C 618 nt19.8■□□□□ 0.76
RTC1Q08281 DEP1YAL013W 1218 nt19.68■□□□□ 0.74
RTC1Q08281 URN1YPR152C 1398 nt19.48■□□□□ 0.71
RTC1Q08281 YKL097CYKL097C 411 nt19.3■□□□□ 0.68
RTC1Q08281 YNL208WYNL208W 600 nt19.22■□□□□ 0.67
RTC1Q08281 RPN10YHR200W 807 nt19.17■□□□□ 0.66
RTC1Q08281 SHU1YHL006C 453 nt19.07■□□□□ 0.64
RTC1Q08281 TIR1YER011W 765 nt19.06■□□□□ 0.64
RTC1Q08281 OPI9YLR338W 858 nt19.04■□□□□ 0.64
RTC1Q08281 SAH1YER043C 1350 nt18.95■□□□□ 0.62
RTC1Q08281 PUT4YOR348C 1884 nt18.87■□□□□ 0.61
RTC1Q08281 SSA1YAL005C 1929 nt18.8■□□□□ 0.6
RTC1Q08281 YAL037C-BYAL037C-B 975 nt18.79■□□□□ 0.6
RTC1Q08281 ARE1YCR048W 1833 nt18.66■□□□□ 0.58
RTC1Q08281 SRB2YHR041C 633 nt18.64■□□□□ 0.57
RTC1Q08281 YJR018WYJR018W 363 nt18.56■□□□□ 0.56
RTC1Q08281 YHR049C-AYHR049C-A 297 nt18.5■□□□□ 0.55
RTC1Q08281 PUN1YLR414C 792 nt18.49■□□□□ 0.55
RTC1Q08281 YOR139CYOR139C 393 nt18.49■□□□□ 0.55
RTC1Q08281 POA1YBR022W 534 nt18.41■□□□□ 0.54
RTC1Q08281 YJR120WYJR120W 351 nt18.39■□□□□ 0.53
RTC1Q08281 WWM1YFL010C 636 nt18.34■□□□□ 0.53
RTC1Q08281 MNP1YGL068W 585 nt18.31■□□□□ 0.52
RTC1Q08281 PTC2YER089C 1395 nt18.29■□□□□ 0.52
RTC1Q08281 NPL3YDR432W 1245 nt18.26■□□□□ 0.51
RTC1Q08281 RPP2BYDR382W 333 nt18.25■□□□□ 0.51
RTC1Q08281 YGR021WYGR021W 873 nt18.2■□□□□ 0.5
RTC1Q08281 HOM6YJR139C 1080 nt18.2■□□□□ 0.5
RTC1Q08281 BUD23YCR047C 828 nt18.15■□□□□ 0.5
RTC1Q08281 RKM5YLR137W 1104 nt17.95■□□□□ 0.46
RTC1Q08281 YOL037CYOL037C 354 nt17.95■□□□□ 0.46
RTC1Q08281 NAB2YGL122C 1578 nt17.93■□□□□ 0.46
RTC1Q08281 BDH2YAL061W 1254 nt17.93■□□□□ 0.46
RTC1Q08281 BSC6YOL137W 1494 nt17.93■□□□□ 0.46
RTC1Q08281 YFL021C-AYFL021C-A 855 nt17.92■□□□□ 0.46
RTC1Q08281 FPR4YLR449W 1179 nt17.91■□□□□ 0.46
RTC1Q08281 SSA3YBL075C 1950 nt17.87■□□□□ 0.45
RTC1Q08281 FIS1YIL065C 468 nt17.78■□□□□ 0.44
RTC1Q08281 DAL1YIR027C 1383 nt17.77■□□□□ 0.44
RTC1Q08281 INM2YDR287W 879 nt17.77■□□□□ 0.44
RTC1Q08281 YBL100CYBL100C 315 nt17.77■□□□□ 0.44
RTC1Q08281 tM(CAU)CtM(CAU)C 72 nt17.71■□□□□ 0.42
RTC1Q08281 IMT4tM(CAU)E 72 nt17.71■□□□□ 0.42
RTC1Q08281 IMT3tM(CAU)J3 72 nt17.71■□□□□ 0.42
RTC1Q08281 IMT1tM(CAU)O1 72 nt17.71■□□□□ 0.42
RTC1Q08281 IMT2tM(CAU)P 72 nt17.71■□□□□ 0.42
RTC1Q08281 LSM3YLR438C-A 270 nt17.68■□□□□ 0.42
RTC1Q08281 PHO4YFR034C 939 nt17.67■□□□□ 0.42
RTC1Q08281 FUN26YAL022C 1554 nt17.55■□□□□ 0.4
RTC1Q08281 PUS2YGL063W 1113 nt17.54■□□□□ 0.4
RTC1Q08281 TRM9YML014W 840 nt17.54■□□□□ 0.4
RTC1Q08281 YLR281CYLR281C 468 nt17.52■□□□□ 0.4
RTC1Q08281 WHI5YOR083W 888 nt17.47■□□□□ 0.39
RTC1Q08281 CCT6YDR188W 1641 nt17.31■□□□□ 0.36
RTC1Q08281 ALF1YNL148C 765 nt17.25■□□□□ 0.35
RTC1Q08281 YLR154C-GYLR154C-G 150 nt17.21■□□□□ 0.35
RTC1Q08281 MOT3YMR070W 1473 nt17.18■□□□□ 0.34
RTC1Q08281 YPR011CYPR011C 981 nt17.17■□□□□ 0.34
RTC1Q08281 YLR236CYLR236C 324 nt17.16■□□□□ 0.34
RTC1Q08281 YPS1YLR120C 1710 nt17.14■□□□□ 0.33
RTC1Q08281 FMP45YDL222C 930 nt17.14■□□□□ 0.33
RTC1Q08281 SUF2tP(AGG)C 72 nt17.14■□□□□ 0.33
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms