Protein–RNA interactions for Protein: P53117

RRT6, Regulator of rDNA transcription protein 6, yeastyeast

Predicted RBP Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRT6P53117 YML009W-BYML009W-B 477 nt23.93■■□□□ 1.42
RRT6P53117 NOP1YDL014W 984 nt23.57■■□□□ 1.36
RRT6P53117 NSR1YGR159C 1245 nt23.18■■□□□ 1.3
RRT6P53117 YKL036CYKL036C 393 nt22.32■■□□□ 1.16
RRT6P53117 YJL027CYJL027C 417 nt20.98■□□□□ 0.95
RRT6P53117 Q0297Q0297 156 nt20.77■□□□□ 0.92
RRT6P53117 SCS3YGL126W 1143 nt20.6■□□□□ 0.89
RRT6P53117 SRX1YKL086W 384 nt20.53■□□□□ 0.88
RRT6P53117 MDJ1YFL016C 1536 nt19.92■□□□□ 0.78
RRT6P53117 YCR051WYCR051W 669 nt19.59■□□□□ 0.73
RRT6P53117 YOL085CYOL085C 342 nt19.28■□□□□ 0.68
RRT6P53117 SCJ1YMR214W 1134 nt19.11■□□□□ 0.65
RRT6P53117 PKP1YIL042C 1185 nt18.92■□□□□ 0.62
RRT6P53117 RPP1BYDL130W 321 nt18.66■□□□□ 0.58
RRT6P53117 ATS1YAL020C 1002 nt18.62■□□□□ 0.57
RRT6P53117 TRN1tP(UGG)A 72 nt18.14■□□□□ 0.49
RRT6P53117 SUF9tP(UGG)F 72 nt18.14■□□□□ 0.49
RRT6P53117 SUF8tP(UGG)H 72 nt18.14■□□□□ 0.49
RRT6P53117 tP(UGG)LtP(UGG)L 72 nt18.14■□□□□ 0.49
RRT6P53117 SUF7tP(UGG)M 72 nt18.14■□□□□ 0.49
RRT6P53117 tP(UGG)N1tP(UGG)N1 72 nt18.14■□□□□ 0.49
RRT6P53117 tP(UGG)N2tP(UGG)N2 72 nt18.14■□□□□ 0.49
RRT6P53117 tP(UGG)O1tP(UGG)O1 72 nt18.14■□□□□ 0.49
RRT6P53117 SUF11tP(UGG)O2 72 nt18.14■□□□□ 0.49
RRT6P53117 CCC1YLR220W 969 nt18.04■□□□□ 0.48
RRT6P53117 DBP2YNL112W 1641 nt17.83■□□□□ 0.45
RRT6P53117 SCR1SCR1 522 nt17.81■□□□□ 0.44
RRT6P53117 PET122YER153C 765 nt17.72■□□□□ 0.43
RRT6P53117 tP(UGG)O3tP(UGG)O3 72 nt17.41■□□□□ 0.38
RRT6P53117 RTC3YHR087W 336 nt17.39■□□□□ 0.37
RRT6P53117 RRN5YLR141W 1092 nt17.3■□□□□ 0.36
RRT6P53117 RSB1YOR049C 1065 nt17.18■□□□□ 0.34
RRT6P53117 PST2YDR032C 597 nt17.11■□□□□ 0.33
RRT6P53117 RVS167YDR388W 1449 nt17.09■□□□□ 0.33
RRT6P53117 YER088W-BYER088W-B 147 nt16.95■□□□□ 0.3
RRT6P53117 YKL097CYKL097C 411 nt16.85■□□□□ 0.29
RRT6P53117 YBR190WYBR190W 312 nt16.85■□□□□ 0.29
RRT6P53117 YDJ1YNL064C 1230 nt16.83■□□□□ 0.28
RRT6P53117 SHR5YOL110W 714 nt16.58■□□□□ 0.24
RRT6P53117 GAR1YHR089C 618 nt16.38■□□□□ 0.21
RRT6P53117 SHU1YHL006C 453 nt16.26■□□□□ 0.19
RRT6P53117 YOR139CYOR139C 393 nt15.96■□□□□ 0.15
RRT6P53117 DEP1YAL013W 1218 nt15.89■□□□□ 0.13
RRT6P53117 YAL037C-BYAL037C-B 975 nt15.83■□□□□ 0.12
RRT6P53117 NPL3YDR432W 1245 nt15.8■□□□□ 0.12
RRT6P53117 TIR1YER011W 765 nt15.79■□□□□ 0.12
RRT6P53117 YNL208WYNL208W 600 nt15.73■□□□□ 0.11
RRT6P53117 URN1YPR152C 1398 nt15.71■□□□□ 0.11
RRT6P53117 RPN10YHR200W 807 nt15.7■□□□□ 0.1
RRT6P53117 SSA1YAL005C 1929 nt15.41■□□□□ 0.06
RRT6P53117 YGR021WYGR021W 873 nt15.36■□□□□ 0.05
RRT6P53117 YOL037CYOL037C 354 nt15.35■□□□□ 0.05
RRT6P53117 tM(CAU)CtM(CAU)C 72 nt15.32■□□□□ 0.04
RRT6P53117 IMT4tM(CAU)E 72 nt15.32■□□□□ 0.04
RRT6P53117 IMT3tM(CAU)J3 72 nt15.32■□□□□ 0.04
RRT6P53117 IMT1tM(CAU)O1 72 nt15.32■□□□□ 0.04
RRT6P53117 IMT2tM(CAU)P 72 nt15.32■□□□□ 0.04
RRT6P53117 OPI9YLR338W 858 nt15.32■□□□□ 0.04
RRT6P53117 MNP1YGL068W 585 nt15.29■□□□□ 0.04
RRT6P53117 HOM6YJR139C 1080 nt15.27■□□□□ 0.04
RRT6P53117 SRB2YHR041C 633 nt15.2■□□□□ 0.02
RRT6P53117 WWM1YFL010C 636 nt15.18■□□□□ 0.02
RRT6P53117 RKM5YLR137W 1104 nt15.07■□□□□ 0
RRT6P53117 SAH1YER043C 1350 nt15.05■□□□□ -0
RRT6P53117 BSC6YOL137W 1494 nt15.04■□□□□ -0
RRT6P53117 YJR018WYJR018W 363 nt15.04■□□□□ -0
RRT6P53117 PUS2YGL063W 1113 nt15.02■□□□□ -0
RRT6P53117 MOT3YMR070W 1473 nt15□□□□□ -0.01
RRT6P53117 RPP2BYDR382W 333 nt14.98□□□□□ -0.01
RRT6P53117 YFL021C-AYFL021C-A 855 nt14.96□□□□□ -0.01
RRT6P53117 PUN1YLR414C 792 nt14.93□□□□□ -0.02
RRT6P53117 YLR281CYLR281C 468 nt14.9□□□□□ -0.02
RRT6P53117 YJR120WYJR120W 351 nt14.81□□□□□ -0.04
RRT6P53117 WHI5YOR083W 888 nt14.78□□□□□ -0.04
RRT6P53117 BDH2YAL061W 1254 nt14.73□□□□□ -0.05
RRT6P53117 PUT4YOR348C 1884 nt14.71□□□□□ -0.05
RRT6P53117 MRPL8YJL063C 717 nt14.67□□□□□ -0.06
RRT6P53117 LSM3YLR438C-A 270 nt14.67□□□□□ -0.06
RRT6P53117 ARE1YCR048W 1833 nt14.66□□□□□ -0.06
RRT6P53117 FMP45YDL222C 930 nt14.64□□□□□ -0.07
RRT6P53117 PTC2YER089C 1395 nt14.6□□□□□ -0.07
RRT6P53117 SSA3YBL075C 1950 nt14.6□□□□□ -0.07
RRT6P53117 DSK2YMR276W 1122 nt14.56□□□□□ -0.08
RRT6P53117 YCH1YGR203W 447 nt14.54□□□□□ -0.08
RRT6P53117 YHR049C-AYHR049C-A 297 nt14.52□□□□□ -0.09
RRT6P53117 IMP2'YIL154C 1041 nt14.51□□□□□ -0.09
RRT6P53117 ADO1YJR105W 1023 nt14.46□□□□□ -0.09
RRT6P53117 YPR011CYPR011C 981 nt14.45□□□□□ -0.1
RRT6P53117 INM2YDR287W 879 nt14.43□□□□□ -0.1
RRT6P53117 YLR236CYLR236C 324 nt14.4□□□□□ -0.1
RRT6P53117 YBL100CYBL100C 315 nt14.4□□□□□ -0.1
RRT6P53117 TRM9YML014W 840 nt14.38□□□□□ -0.11
RRT6P53117 POA1YBR022W 534 nt14.37□□□□□ -0.11
RRT6P53117 UBX6YJL048C 1191 nt14.34□□□□□ -0.11
RRT6P53117 NAB2YGL122C 1578 nt14.34□□□□□ -0.11
RRT6P53117 YLR154C-GYLR154C-G 150 nt14.31□□□□□ -0.12
RRT6P53117 FPR4YLR449W 1179 nt14.31□□□□□ -0.12
RRT6P53117 BUD23YCR047C 828 nt14.29□□□□□ -0.12
RRT6P53117 YEL076C-AYEL076C-A 651 nt14.29□□□□□ -0.12
RRT6P53117 YEL076CYEL076C 651 nt14.29□□□□□ -0.12
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms