Protein–RNA interactions for Protein: P39685

POM152, Nucleoporin POM152, yeastyeast

Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
POM152P39685 YML009W-BYML009W-B 477 nt24.75■■□□□ 1.55
POM152P39685 NSR1YGR159C 1245 nt24.25■■□□□ 1.47
POM152P39685 NOP1YDL014W 984 nt24.05■■□□□ 1.44
POM152P39685 YKL036CYKL036C 393 nt22.46■■□□□ 1.19
POM152P39685 MDJ1YFL016C 1536 nt21.45■■□□□ 1.02
POM152P39685 Q0297Q0297 156 nt21.13■□□□□ 0.97
POM152P39685 YJL027CYJL027C 417 nt21.1■□□□□ 0.97
POM152P39685 SRX1YKL086W 384 nt21.04■□□□□ 0.96
POM152P39685 SCS3YGL126W 1143 nt20.85■□□□□ 0.93
POM152P39685 YCR051WYCR051W 669 nt20.03■□□□□ 0.8
POM152P39685 SCJ1YMR214W 1134 nt19.53■□□□□ 0.72
POM152P39685 YOL085CYOL085C 342 nt19.44■□□□□ 0.7
POM152P39685 PKP1YIL042C 1185 nt19.21■□□□□ 0.67
POM152P39685 DBP2YNL112W 1641 nt19.01■□□□□ 0.63
POM152P39685 RPP1BYDL130W 321 nt18.99■□□□□ 0.63
POM152P39685 TRN1tP(UGG)A 72 nt18.91■□□□□ 0.62
POM152P39685 SUF9tP(UGG)F 72 nt18.91■□□□□ 0.62
POM152P39685 SUF8tP(UGG)H 72 nt18.91■□□□□ 0.62
POM152P39685 tP(UGG)LtP(UGG)L 72 nt18.91■□□□□ 0.62
POM152P39685 SUF7tP(UGG)M 72 nt18.91■□□□□ 0.62
POM152P39685 tP(UGG)N1tP(UGG)N1 72 nt18.91■□□□□ 0.62
POM152P39685 tP(UGG)N2tP(UGG)N2 72 nt18.91■□□□□ 0.62
POM152P39685 tP(UGG)O1tP(UGG)O1 72 nt18.91■□□□□ 0.62
POM152P39685 SUF11tP(UGG)O2 72 nt18.91■□□□□ 0.62
POM152P39685 ATS1YAL020C 1002 nt18.87■□□□□ 0.61
POM152P39685 CCC1YLR220W 969 nt18.76■□□□□ 0.59
POM152P39685 PET122YER153C 765 nt18.17■□□□□ 0.5
POM152P39685 YBR190WYBR190W 312 nt18.11■□□□□ 0.49
POM152P39685 SCR1SCR1 522 nt17.98■□□□□ 0.47
POM152P39685 tP(UGG)O3tP(UGG)O3 72 nt17.96■□□□□ 0.46
POM152P39685 RVS167YDR388W 1449 nt17.93■□□□□ 0.46
POM152P39685 RTC3YHR087W 336 nt17.89■□□□□ 0.45
POM152P39685 RRN5YLR141W 1092 nt17.63■□□□□ 0.41
POM152P39685 RSB1YOR049C 1065 nt17.39■□□□□ 0.37
POM152P39685 SHR5YOL110W 714 nt17.35■□□□□ 0.37
POM152P39685 YDJ1YNL064C 1230 nt17.33■□□□□ 0.36
POM152P39685 YER088W-BYER088W-B 147 nt17.29■□□□□ 0.36
POM152P39685 PST2YDR032C 597 nt17.26■□□□□ 0.35
POM152P39685 YKL097CYKL097C 411 nt17.2■□□□□ 0.34
POM152P39685 GAR1YHR089C 618 nt16.97■□□□□ 0.31
POM152P39685 DEP1YAL013W 1218 nt16.87■□□□□ 0.29
POM152P39685 URN1YPR152C 1398 nt16.76■□□□□ 0.27
POM152P39685 YNL208WYNL208W 600 nt16.53■□□□□ 0.24
POM152P39685 RPN10YHR200W 807 nt16.51■□□□□ 0.23
POM152P39685 SHU1YHL006C 453 nt16.41■□□□□ 0.22
POM152P39685 OPI9YLR338W 858 nt16.41■□□□□ 0.22
POM152P39685 TIR1YER011W 765 nt16.37■□□□□ 0.21
POM152P39685 SAH1YER043C 1350 nt16.29■□□□□ 0.2
POM152P39685 PUT4YOR348C 1884 nt16.28■□□□□ 0.2
POM152P39685 YOR139CYOR139C 393 nt16.26■□□□□ 0.19
POM152P39685 SSA1YAL005C 1929 nt16.14■□□□□ 0.17
POM152P39685 ARE1YCR048W 1833 nt16.08■□□□□ 0.16
POM152P39685 YAL037C-BYAL037C-B 975 nt16.05■□□□□ 0.16
POM152P39685 NPL3YDR432W 1245 nt16.02■□□□□ 0.16
POM152P39685 SRB2YHR041C 633 nt15.97■□□□□ 0.15
POM152P39685 YJR018WYJR018W 363 nt15.96■□□□□ 0.15
POM152P39685 YHR049C-AYHR049C-A 297 nt15.94■□□□□ 0.14
POM152P39685 PUN1YLR414C 792 nt15.94■□□□□ 0.14
POM152P39685 YJR120WYJR120W 351 nt15.82■□□□□ 0.12
POM152P39685 POA1YBR022W 534 nt15.82■□□□□ 0.12
POM152P39685 PTC2YER089C 1395 nt15.73■□□□□ 0.11
POM152P39685 WWM1YFL010C 636 nt15.72■□□□□ 0.11
POM152P39685 RPP2BYDR382W 333 nt15.7■□□□□ 0.1
POM152P39685 MNP1YGL068W 585 nt15.68■□□□□ 0.1
POM152P39685 BSC6YOL137W 1494 nt15.66■□□□□ 0.1
POM152P39685 YGR021WYGR021W 873 nt15.66■□□□□ 0.1
POM152P39685 HOM6YJR139C 1080 nt15.64■□□□□ 0.09
POM152P39685 BUD23YCR047C 828 nt15.59■□□□□ 0.09
POM152P39685 tM(CAU)CtM(CAU)C 72 nt15.54■□□□□ 0.08
POM152P39685 IMT4tM(CAU)E 72 nt15.54■□□□□ 0.08
POM152P39685 IMT3tM(CAU)J3 72 nt15.54■□□□□ 0.08
POM152P39685 IMT1tM(CAU)O1 72 nt15.54■□□□□ 0.08
POM152P39685 IMT2tM(CAU)P 72 nt15.54■□□□□ 0.08
POM152P39685 NAB2YGL122C 1578 nt15.45■□□□□ 0.06
POM152P39685 BDH2YAL061W 1254 nt15.43■□□□□ 0.06
POM152P39685 YOL037CYOL037C 354 nt15.43■□□□□ 0.06
POM152P39685 YFL021C-AYFL021C-A 855 nt15.42■□□□□ 0.06
POM152P39685 RKM5YLR137W 1104 nt15.42■□□□□ 0.06
POM152P39685 MOT3YMR070W 1473 nt15.39■□□□□ 0.05
POM152P39685 SSA3YBL075C 1950 nt15.39■□□□□ 0.05
POM152P39685 FPR4YLR449W 1179 nt15.36■□□□□ 0.05
POM152P39685 FIS1YIL065C 468 nt15.33■□□□□ 0.04
POM152P39685 DAL1YIR027C 1383 nt15.31■□□□□ 0.04
POM152P39685 INM2YDR287W 879 nt15.31■□□□□ 0.04
POM152P39685 YBL100CYBL100C 315 nt15.29■□□□□ 0.04
POM152P39685 LSM3YLR438C-A 270 nt15.22■□□□□ 0.03
POM152P39685 PHO4YFR034C 939 nt15.21■□□□□ 0.03
POM152P39685 PUS2YGL063W 1113 nt15.17■□□□□ 0.02
POM152P39685 FUN26YAL022C 1554 nt15.1■□□□□ 0.01
POM152P39685 TRM9YML014W 840 nt15.08■□□□□ 0
POM152P39685 YLR281CYLR281C 468 nt15.04■□□□□ -0
POM152P39685 MRPL8YJL063C 717 nt15.02■□□□□ -0
POM152P39685 WHI5YOR083W 888 nt14.98□□□□□ -0.01
POM152P39685 UBX6YJL048C 1191 nt14.97□□□□□ -0.01
POM152P39685 CCT6YDR188W 1641 nt14.92□□□□□ -0.02
POM152P39685 ALF1YNL148C 765 nt14.85□□□□□ -0.03
POM152P39685 FMP45YDL222C 930 nt14.82□□□□□ -0.04
POM152P39685 ADO1YJR105W 1023 nt14.78□□□□□ -0.04
POM152P39685 YLR154C-GYLR154C-G 150 nt14.78□□□□□ -0.04
POM152P39685 YPS1YLR120C 1710 nt14.78□□□□□ -0.04
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms