Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC14.6□□□□□ -0.073e-7■■□□□ 12.2
SND1Q7KZF4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.13□□□□□ -1.433e-7■■□□□ 12.2
SND1Q7KZF4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.87■■□□□ 1.093e-7■■□□□ 12.2
SND1Q7KZF4 PMPCB-204ENST00000444457 2385 ntTSL 221.01■□□□□ 0.953e-7■■□□□ 12.2
SND1Q7KZF4 PMPCB-205ENST00000453466 1509 ntTSL 520.73■□□□□ 0.913e-7■■□□□ 12.2
SND1Q7KZF4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.343e-7■■□□□ 12.2
SND1Q7KZF4 PMPCB-203ENST00000443722 1323 ntTSL 513.64□□□□□ -0.233e-7■■□□□ 12.2
SND1Q7KZF4 MPP1-209ENST00000453245 729 ntTSL 513.44□□□□□ -0.269e-18■■□□□ 12.2
SND1Q7KZF4 SLC5A6-212ENST00000461319 598 ntTSL 311.71□□□□□ -0.532e-6■■□□□ 12.2
SND1Q7KZF4 FDFT1-217ENST00000530337 741 ntTSL 318.32■□□□□ 0.521e-7■■□□□ 12.2
SND1Q7KZF4 C2-216ENST00000494905 536 ntTSL 413.88□□□□□ -0.193e-11■■□□□ 12.2
SND1Q7KZF4 AARS-204ENST00000566969 610 ntTSL 210.21□□□□□ -0.772e-11■■□□□ 12.2
SND1Q7KZF4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.611e-6■■□□□ 12.2
SND1Q7KZF4 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.211e-6■■□□□ 12.2
SND1Q7KZF4 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.251e-6■■□□□ 12.2
SND1Q7KZF4 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.631e-22■■□□□ 12.2
SND1Q7KZF4 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.71e-22■■□□□ 12.2
SND1Q7KZF4 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.841e-22■■□□□ 12.2
SND1Q7KZF4 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.871e-22■■□□□ 12.2
SND1Q7KZF4 HADHA-201ENST00000380649 3037 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.513e-7■■□□□ 12.2
SND1Q7KZF4 SGSH-202ENST00000570427 583 ntTSL 316.24■□□□□ 0.194e-8■■□□□ 12.2
SND1Q7KZF4 PHB-204ENST00000434917 534 ntTSL 410.08□□□□□ -0.83e-9■■□□□ 12.2
SND1Q7KZF4 PHB-208ENST00000507748 582 ntTSL 1 (best)5.59□□□□□ -1.513e-9■■□□□ 12.2
SND1Q7KZF4 CCT7-204ENST00000409924 567 ntTSL 320.87■□□□□ 0.933e-14■■□□□ 12.2
SND1Q7KZF4 CCT7-211ENST00000480489 527 ntTSL 220.87■□□□□ 0.933e-14■■□□□ 12.2
SND1Q7KZF4 CCT7-203ENST00000399032 593 ntTSL 420.16■□□□□ 0.823e-14■■□□□ 12.2
SND1Q7KZF4 CCT7-208ENST00000471927 556 ntTSL 417.2■□□□□ 0.343e-14■■□□□ 12.2
SND1Q7KZF4 CCT7-205ENST00000461290 1018 ntTSL 215.41■□□□□ 0.063e-14■■□□□ 12.2
SND1Q7KZF4 CCT7-207ENST00000469844 612 ntTSL 415.17■□□□□ 0.023e-14■■□□□ 12.2
SND1Q7KZF4 CCT7-212ENST00000482064 567 ntTSL 49.02□□□□□ -0.973e-14■■□□□ 12.2
SND1Q7KZF4 CCT7-214ENST00000492253 531 ntTSL 47.05□□□□□ -1.283e-14■■□□□ 12.2
SND1Q7KZF4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.19□□□□□ -1.583e-14■■□□□ 12.2
SND1Q7KZF4 SLC16A3-210ENST00000580189 872 ntTSL 520.13■□□□□ 0.813e-13■■□□□ 12.2
SND1Q7KZF4 SLC16A3-217ENST00000583237 808 ntTSL 318.91■□□□□ 0.623e-13■■□□□ 12.2
SND1Q7KZF4 PCOLCE-210ENST00000496269 995 ntTSL 222.75■■□□□ 1.231e-7■■□□□ 12.2
SND1Q7KZF4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.476e-7■■□□□ 12.2
SND1Q7KZF4 HINT1-206ENST00000508495 825 ntTSL 1 (best)16.47■□□□□ 0.236e-7■■□□□ 12.2
SND1Q7KZF4 HINT1-209ENST00000513345 656 ntTSL 216.19■□□□□ 0.186e-7■■□□□ 12.2
SND1Q7KZF4 HINT1-207ENST00000511475 923 ntTSL 310.41□□□□□ -0.746e-7■■□□□ 12.2
SND1Q7KZF4 HINT1-203ENST00000506207 369 ntTSL 55.74□□□□□ -1.496e-7■■□□□ 12.2
SND1Q7KZF4 HINT1-202ENST00000504202 619 ntTSL 55.48□□□□□ -1.536e-7■■□□□ 12.2
SND1Q7KZF4 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC13.86□□□□□ -0.193e-8■■□□□ 12.2
SND1Q7KZF4 CDC42-205ENST00000498236 816 ntTSL 58.68□□□□□ -1.023e-6■■□□□ 12.2
SND1Q7KZF4 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.14□□□□□ -1.113e-6■■□□□ 12.2
SND1Q7KZF4 TMEM205-214ENST00000591677 628 ntTSL 217.55■□□□□ 0.42e-9■■□□□ 12.2
SND1Q7KZF4 SLIRP-207ENST00000556831 729 ntTSL 214.66□□□□□ -0.066e-13■■□□□ 12.2
SND1Q7KZF4 SLIRP-203ENST00000554074 445 ntTSL 36.81□□□□□ -1.326e-13■■□□□ 12.2
SND1Q7KZF4 TMEM132A-210ENST00000540112 2013 ntTSL 223.01■■□□□ 1.275e-7■■□□□ 12.2
SND1Q7KZF4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.145e-7■■□□□ 12.2
SND1Q7KZF4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.835e-7■■□□□ 12.2
SND1Q7KZF4 B3GNT3-203ENST00000599265 856 ntTSL 319.04■□□□□ 0.643e-10■■□□□ 12.2
SND1Q7KZF4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.71■□□□□ 0.594e-8■■□□□ 12.2
SND1Q7KZF4 TMEM132A-204ENST00000535480 692 ntTSL 315.65■□□□□ 0.15e-7■■□□□ 12.2
SND1Q7KZF4 ESYT1-203ENST00000547667 594 ntTSL 214.07□□□□□ -0.164e-8■■□□□ 12.2
SND1Q7KZF4 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC13.69□□□□□ -0.224e-8■■□□□ 12.2
SND1Q7KZF4 NPC1L1-201ENST00000289547 5048 ntTSL 1 (best) BASIC12.66□□□□□ -0.384e-8■■□□□ 12.2
SND1Q7KZF4 NPC1L1-202ENST00000381160 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.394e-8■■□□□ 12.2
SND1Q7KZF4 PGK1-204ENST00000477335 353 ntTSL 39.6□□□□□ -0.874e-31■■□□□ 12.2
SND1Q7KZF4 PGK1-205ENST00000491291 702 ntTSL 59.35□□□□□ -0.914e-11■■□□□ 12.2
SND1Q7KZF4 SEC11A-204ENST00000558196 540 ntTSL 38.05□□□□□ -1.122e-10■■□□□ 12.2
SND1Q7KZF4 SMPD1-210ENST00000534405 2446 ntTSL 1 (best)21.26■□□□□ 0.993e-6■■□□□ 12.2
SND1Q7KZF4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.923e-6■■□□□ 12.2
SND1Q7KZF4 SMPD1-205ENST00000531303 1451 ntTSL 1 (best)19.83■□□□□ 0.763e-6■■□□□ 12.2
SND1Q7KZF4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.743e-6■■□□□ 12.2
SND1Q7KZF4 SMPD1-208ENST00000533123 2211 ntTSL 1 (best)19.25■□□□□ 0.673e-6■■□□□ 12.2
SND1Q7KZF4 TMEM30A-204ENST00000518161 445 ntTSL 46.75□□□□□ -1.333e-10■■□□□ 12.2
SND1Q7KZF4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.45■■□□□ 1.023e-8■■□□□ 12.1
SND1Q7KZF4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.2■□□□□ 0.823e-8■■□□□ 12.1
SND1Q7KZF4 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC14.49□□□□□ -0.093e-8■■□□□ 12.1
SND1Q7KZF4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.112e-7■■□□□ 12.1
SND1Q7KZF4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.972e-7■■□□□ 12.1
SND1Q7KZF4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.882e-7■■□□□ 12.1
SND1Q7KZF4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.13■□□□□ 0.812e-7■■□□□ 12.1
SND1Q7KZF4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.42e-7■■□□□ 12.1
SND1Q7KZF4 CD55-208ENST00000476590 2163 ntTSL 1 (best)5.02□□□□□ -1.612e-7■■□□□ 12.1
SND1Q7KZF4 CD55-207ENST00000465534 1480 ntTSL 1 (best)4.83□□□□□ -1.642e-7■■□□□ 12.1
SND1Q7KZF4 ERAP1-207ENST00000508227 555 ntTSL 424.16■■□□□ 1.469e-9■■□□□ 12.1
SND1Q7KZF4 SGSH-215ENST00000576707 546 ntTSL 411.9□□□□□ -0.53e-8■■□□□ 12.1
SND1Q7KZF4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.18■□□□□ 0.341e-6■■□□□ 12.1
SND1Q7KZF4 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.021e-6■■□□□ 12.1
SND1Q7KZF4 M6PR-207ENST00000543159 720 ntTSL 210.8□□□□□ -0.683e-7■■□□□ 12.1
SND1Q7KZF4 PDIA5-205ENST00000484644 667 ntTSL 524.81■■□□□ 1.564e-8■■□□□ 12.1
SND1Q7KZF4 TMEM209-207ENST00000479804 494 ntTSL 37□□□□□ -1.299e-7■■□□□ 12.1
SND1Q7KZF4 TSPAN4-217ENST00000527644 968 ntTSL 227.26■■□□□ 1.958e-7■■□□□ 12.1
SND1Q7KZF4 ATXN10-211ENST00000498009 873 ntTSL 523.32■■□□□ 1.329e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.162e-10■■□□□ 12.1
SND1Q7KZF4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.152e-10■■□□□ 12.1
SND1Q7KZF4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.132e-10■■□□□ 12.1
SND1Q7KZF4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.129e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.41■□□□□ 0.862e-10■■□□□ 12.1
SND1Q7KZF4 PDHB-203ENST00000461692 1535 ntTSL 1 (best)19.56■□□□□ 0.729e-6■■□□□ 12.1
SND1Q7KZF4 C12orf57-203ENST00000538392 979 ntTSL 219.46■□□□□ 0.719e-6■■□□□ 12.1
SND1Q7KZF4 TSPAN4-215ENST00000525334 860 ntTSL 319.12■□□□□ 0.658e-7■■□□□ 12.1
SND1Q7KZF4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.629e-6■■□□□ 12.1
SND1Q7KZF4 CD82-203ENST00000524704 584 ntTSL 218.78■□□□□ 0.69e-6■■□□□ 12.1
SND1Q7KZF4 PDHA1-207ENST00000423505 731 ntTSL 218.53■□□□□ 0.569e-6■■□□□ 12.1
SND1Q7KZF4 PDHB-208ENST00000480626 710 ntTSL 318.18■□□□□ 0.59e-6■■□□□ 12.1
SND1Q7KZF4 SLC39A11-208ENST00000579988 910 ntTSL 317.93■□□□□ 0.469e-6■■□□□ 12.1
SND1Q7KZF4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.9■□□□□ 0.462e-10■■□□□ 12.1
SND1Q7KZF4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.86■□□□□ 0.452e-10■■□□□ 12.1
Retrieved 100 of 13,567 protein–RNA pairs in 87 ms