RNA–Protein interactions for RNA: ENST00000370050.9

TMEM30A-202, Transcript of transmembrane protein 30A, humanhuman

TSL 1 (best) BASIC

Gene TMEM30A, Length 3,775 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-202ENST00000370050 CHIC1Q5VXU3 224 aa10.16□□□□□ -0.78
TMEM30A-202ENST00000370050 AEBP2Q6ZN18 517 aaPredicted RBP10.08□□□□□ -0.8
TMEM30A-202ENST00000370050 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
TMEM30A-202ENST00000370050 NISCHQ9Y2I1 1504 aa9.34□□□□□ -0.91
TMEM30A-202ENST00000370050 EHMT2Q96KQ7 1210 aa9.04□□□□□ -0.96
TMEM30A-202ENST00000370050 PLPPR3Q6T4P5 718 aa8.99□□□□□ -0.97
TMEM30A-202ENST00000370050 PHF23Q9BUL5 403 aaPredicted RBP8.91□□□□□ -0.98
TMEM30A-202ENST00000370050 RTN4Q9NQC3 1192 aaKnown RBP8.84□□□□□ -0.99
TMEM30A-202ENST00000370050 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
TMEM30A-202ENST00000370050 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
TMEM30A-202ENST00000370050 SENP3Q9H4L4 574 aaPredicted RBP8.57□□□□□ -1.04
TMEM30A-202ENST00000370050 PRKCSHP14314 528 aaPredicted RBP8.55□□□□□ -1.04
TMEM30A-202ENST00000370050 KCNA4P22459 653 aa8.52□□□□□ -1.05
TMEM30A-202ENST00000370050 APLP2Q06481 763 aa8.45□□□□□ -1.06
TMEM30A-202ENST00000370050 CSRNP3Q8WYN3 585 aa8.44□□□□□ -1.06
TMEM30A-202ENST00000370050 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
TMEM30A-202ENST00000370050 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
TMEM30A-202ENST00000370050 ARXQ96QS3 562 aa8.22□□□□□ -1.09
TMEM30A-202ENST00000370050 TTBK1Q5TCY1 1321 aaPredicted RBP8.19□□□□□ -1.1
TMEM30A-202ENST00000370050 CCDC180Q9P1Z9 1646 aa8.19□□□□□ -1.1
TMEM30A-202ENST00000370050 TULP1O00294 542 aaPredicted RBP8.15□□□□□ -1.1
TMEM30A-202ENST00000370050 PELP1Q8IZL8 1130 aaKnown RBP8.14□□□□□ -1.11
TMEM30A-202ENST00000370050 TAOK2Q9UL54 1235 aa8.13□□□□□ -1.11
TMEM30A-202ENST00000370050 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
TMEM30A-202ENST00000370050 MYT1Q01538 1121 aa8.1□□□□□ -1.11
TMEM30A-202ENST00000370050 KLHL34Q8N239 644 aa8.1□□□□□ -1.11
TMEM30A-202ENST00000370050 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
TMEM30A-202ENST00000370050 HOMEZQ8IX15 550 aa7.94□□□□□ -1.14
TMEM30A-202ENST00000370050 PODXL2Q9NZ53 605 aa7.9□□□□□ -1.14
TMEM30A-202ENST00000370050 BCANQ96GW7 911 aa7.88□□□□□ -1.15
TMEM30A-202ENST00000370050 EIF5BO60841 1220 aaKnown RBP7.87□□□□□ -1.15
TMEM30A-202ENST00000370050 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
TMEM30A-202ENST00000370050 FOXD1Q16676 465 aa7.86□□□□□ -1.15
TMEM30A-202ENST00000370050 PLEKHG5O94827 1062 aa7.85□□□□□ -1.15
TMEM30A-202ENST00000370050 ZCCHC6Q5VYS8 1495 aaKnown RBP7.84□□□□□ -1.15
TMEM30A-202ENST00000370050 PLCB2Q00722 1185 aa7.84□□□□□ -1.16
TMEM30A-202ENST00000370050 SLC4A1APQ9BWU0 796 aaKnown RBP7.83□□□□□ -1.16
TMEM30A-202ENST00000370050 GTF3C3Q9Y5Q9 886 aa7.81□□□□□ -1.16
TMEM30A-202ENST00000370050 ZBTB22O15209 634 aa7.8□□□□□ -1.16
TMEM30A-202ENST00000370050 DCAF1Q9Y4B6 1507 aa7.78□□□□□ -1.16
TMEM30A-202ENST00000370050 HAP1P54257 671 aaPredicted RBP7.7□□□□□ -1.18
TMEM30A-202ENST00000370050 MYO15BQ96JP2 1530 aa7.69□□□□□ -1.18
TMEM30A-202ENST00000370050 NPM2Q86SE8 214 aaKnown RBP7.68□□□□□ -1.18
TMEM30A-202ENST00000370050 TMEM132AQ24JP5 1023 aa7.68□□□□□ -1.18
TMEM30A-202ENST00000370050 PPP6R1Q9UPN7 881 aa7.66□□□□□ -1.18
TMEM30A-202ENST00000370050 DCAF8L2P0C7V8 631 aa7.65□□□□□ -1.19
TMEM30A-202ENST00000370050 TRIM26Q12899 539 aaPredicted RBP7.64□□□□□ -1.19
TMEM30A-202ENST00000370050 LOC105371045A0A1W2PR82 267 aa7.63□□□□□ -1.19
TMEM30A-202ENST00000370050 KDM2AQ9Y2K7 1162 aa7.62□□□□□ -1.19
TMEM30A-202ENST00000370050 ADRA2BP18089 450 aa7.62□□□□□ -1.19
TMEM30A-202ENST00000370050 ABCC9O60706 1549 aa7.62□□□□□ -1.19
TMEM30A-202ENST00000370050 NACADO15069 1562 aa7.61□□□□□ -1.19
TMEM30A-202ENST00000370050 C14orf37Q86TY3 774 aa7.6□□□□□ -1.19
TMEM30A-202ENST00000370050 HRCP23327 699 aa7.58□□□□□ -1.2
TMEM30A-202ENST00000370050 FBLN2P98095 1184 aa7.56□□□□□ -1.2
TMEM30A-202ENST00000370050 UBTFP17480 764 aaKnown RBP7.55□□□□□ -1.2
TMEM30A-202ENST00000370050 SHROOM4Q9ULL8 1493 aa7.54□□□□□ -1.2
TMEM30A-202ENST00000370050 RB1CC1Q8TDY2 1594 aa7.54□□□□□ -1.2
TMEM30A-202ENST00000370050 SUPT5HO00267 1087 aaKnown RBP7.53□□□□□ -1.2
TMEM30A-202ENST00000370050 VSIG10Q8N0Z9 540 aa7.47□□□□□ -1.21
TMEM30A-202ENST00000370050 FKBP8Q14318 412 aa7.45□□□□□ -1.22
TMEM30A-202ENST00000370050 SCRIBQ14160 1630 aa7.44□□□□□ -1.22
TMEM30A-202ENST00000370050 FBXO3Q9UK99 471 aa7.44□□□□□ -1.22
TMEM30A-202ENST00000370050 NPM3O75607 178 aaKnown RBP7.4□□□□□ -1.22
TMEM30A-202ENST00000370050 DNAJC5BQ9UF47 199 aa7.39□□□□□ -1.23
TMEM30A-202ENST00000370050 BCL11AQ9H165 835 aa7.37□□□□□ -1.23
TMEM30A-202ENST00000370050 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
TMEM30A-202ENST00000370050 IGSF3O75054 1194 aa7.34□□□□□ -1.23
TMEM30A-202ENST00000370050 SAMD1Q6SPF0 538 aaPredicted RBP7.34□□□□□ -1.23
TMEM30A-202ENST00000370050 PDIA4P13667 645 aaKnown RBP7.32□□□□□ -1.24
TMEM30A-202ENST00000370050 UNC13AQ9UPW8 1703 aa7.31□□□□□ -1.24
TMEM30A-202ENST00000370050 PIAS4Q8N2W9 510 aaPredicted RBP7.3□□□□□ -1.24
TMEM30A-202ENST00000370050 DHX37Q8IY37 1157 aaKnown RBP7.29□□□□□ -1.24
TMEM30A-202ENST00000370050 FAM9AQ8IZU1 332 aaPredicted RBP7.28□□□□□ -1.24
TMEM30A-202ENST00000370050 PPP4R3CPQ6ZMV5 832 aa7.27□□□□□ -1.25
TMEM30A-202ENST00000370050 MSH5O43196 834 aa7.26□□□□□ -1.25
TMEM30A-202ENST00000370050 TRHP20396 242 aaPredicted RBP7.26□□□□□ -1.25
TMEM30A-202ENST00000370050 UBE2Q2Q8WVN8 375 aa7.23□□□□□ -1.25
TMEM30A-202ENST00000370050 BAZ1AQ9NRL2 1556 aaPredicted RBP7.23□□□□□ -1.25
TMEM30A-202ENST00000370050 BICRAQ9NZM4 1560 aa7.23□□□□□ -1.25
TMEM30A-202ENST00000370050 RSF1Q96T23 1441 aaPredicted RBP7.23□□□□□ -1.25
TMEM30A-202ENST00000370050 CNKSR2Q8WXI2 1034 aa7.2□□□□□ -1.26
TMEM30A-202ENST00000370050 CECR2Q9BXF3 1484 aa7.19□□□□□ -1.26
TMEM30A-202ENST00000370050 MROH2BQ7Z745 1585 aa7.17□□□□□ -1.26
TMEM30A-202ENST00000370050 SMARCA4P51532 1647 aa7.17□□□□□ -1.26
TMEM30A-202ENST00000370050 PABPN1Q86U42 306 aaKnown RBP eCLIP7.16□□□□□ -1.26
TMEM30A-202ENST00000370050 CFAP44Q96MT7 982 aa7.16□□□□□ -1.26
TMEM30A-202ENST00000370050 NECTIN2Q92692 538 aa7.14□□□□□ -1.27
TMEM30A-202ENST00000370050 TSHZ2Q9NRE2 1034 aa7.14□□□□□ -1.27
TMEM30A-202ENST00000370050 PDE4CQ08493 712 aa7.13□□□□□ -1.27
TMEM30A-202ENST00000370050 WIZO95785 1651 aa7.11□□□□□ -1.27
TMEM30A-202ENST00000370050 NPM1P06748 294 aaKnown RBP eCLIP7.11□□□□□ -1.27
TMEM30A-202ENST00000370050 CDK11BP21127 795 aaKnown RBP7.11□□□□□ -1.27
TMEM30A-202ENST00000370050 CDK11AQ9UQ88 783 aaPredicted RBP7.11□□□□□ -1.27
TMEM30A-202ENST00000370050 SCAF1Q9H7N4 1312 aaKnown RBP7.11□□□□□ -1.27
TMEM30A-202ENST00000370050 PEG3Q9GZU2 1588 aa7.1□□□□□ -1.27
TMEM30A-202ENST00000370050 TOP2AP11388 1531 aaKnown RBP7.1□□□□□ -1.27
TMEM30A-202ENST00000370050 C1orf115Q9H7X2 142 aa7.09□□□□□ -1.27
TMEM30A-202ENST00000370050 PAXIP1Q6ZW49 1069 aaPredicted RBP7.09□□□□□ -1.28
TMEM30A-202ENST00000370050 SMARCA2P51531 1590 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms