RNA–Protein interactions for RNA: ENST00000423505.5

PDHA1-207, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 2

Gene PDHA1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-207ENST00000423505 NISCHQ9Y2I1 1504 aa44.7■■■■■ 4.75
PDHA1-207ENST00000423505 CCDC180Q9P1Z9 1646 aa40.07■■■■■ 4.01
PDHA1-207ENST00000423505 ABCC9O60706 1549 aa39.64■■■■□ 3.94
PDHA1-207ENST00000423505 RB1CC1Q8TDY2 1594 aa37.91■■■■□ 3.66
PDHA1-207ENST00000423505 NACADO15069 1562 aa37.7■■■■□ 3.63
PDHA1-207ENST00000423505 DCAF8L2P0C7V8 631 aa37.53■■■■□ 3.6
PDHA1-207ENST00000423505 MYO15BQ96JP2 1530 aa37.26■■■■□ 3.55
PDHA1-207ENST00000423505 UNC13AQ9UPW8 1703 aa37.22■■■■□ 3.55
PDHA1-207ENST00000423505 ZCCHC6Q5VYS8 1495 aaKnown RBP37.14■■■■□ 3.54
PDHA1-207ENST00000423505 DCAF1Q9Y4B6 1507 aa36.93■■■■□ 3.5
PDHA1-207ENST00000423505 PABPN1Q86U42 306 aaKnown RBP eCLIP36.89■■■■□ 3.5
PDHA1-207ENST00000423505 BICRAQ9NZM4 1560 aa36.8■■■■□ 3.48
PDHA1-207ENST00000423505 DNAJC5BQ9UF47 199 aa36.78■■■■□ 3.48
PDHA1-207ENST00000423505 SCRIBQ14160 1630 aa36.53■■■■□ 3.44
PDHA1-207ENST00000423505 SHROOM4Q9ULL8 1493 aa36.28■■■■□ 3.4
PDHA1-207ENST00000423505 CC2D2AQ9P2K1 1620 aa35.87■■■■□ 3.33
PDHA1-207ENST00000423505 EIF4G1Q04637 1599 aaKnown RBP35.86■■■■□ 3.33
PDHA1-207ENST00000423505 CECR2Q9BXF3 1484 aa35.65■■■■□ 3.3
PDHA1-207ENST00000423505 SMARCA4P51532 1647 aa34.86■■■■□ 3.17
PDHA1-207ENST00000423505 NCAPD3P42695 1498 aa34.74■■■■□ 3.15
PDHA1-207ENST00000423505 ATAD2BQ9ULI0 1458 aa34.71■■■■□ 3.15
PDHA1-207ENST00000423505 BAZ1AQ9NRL2 1556 aaPredicted RBP34.7■■■■□ 3.15
PDHA1-207ENST00000423505 SMARCA2P51531 1590 aa34.68■■■■□ 3.14
PDHA1-207ENST00000423505 HMGXB3Q12766 1538 aa34.6■■■■□ 3.13
PDHA1-207ENST00000423505 MROH2BQ7Z745 1585 aa34.47■■■■□ 3.11
PDHA1-207ENST00000423505 PEG3Q9GZU2 1588 aa34.47■■■■□ 3.11
PDHA1-207ENST00000423505 BAZ1BQ9UIG0 1483 aaKnown RBP34.44■■■■□ 3.1
PDHA1-207ENST00000423505 ERCC6Q03468 1493 aa34.2■■■■□ 3.06
PDHA1-207ENST00000423505 NESP48681 1621 aa34.17■■■■□ 3.06
PDHA1-207ENST00000423505 WIZO95785 1651 aa34.15■■■■□ 3.06
PDHA1-207ENST00000423505 LAMC3Q9Y6N6 1575 aa33.99■■■■□ 3.03
PDHA1-207ENST00000423505 CUX2O14529 1486 aa33.99■■■■□ 3.03
PDHA1-207ENST00000423505 KIF21AQ7Z4S6 1674 aa33.86■■■■□ 3.01
PDHA1-207ENST00000423505 RSF1Q96T23 1441 aaPredicted RBP33.83■■■■□ 3.01
PDHA1-207ENST00000423505 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
PDHA1-207ENST00000423505 PDS5BQ9NTI5 1447 aa33.7■■■□□ 2.99
PDHA1-207ENST00000423505 CADPSQ9ULU8 1353 aa33.7■■■□□ 2.98
PDHA1-207ENST00000423505 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
PDHA1-207ENST00000423505 DNAJC5Q9H3Z4 198 aa33.48■■■□□ 2.95
PDHA1-207ENST00000423505 MRC2Q9UBG0 1479 aa33.44■■■□□ 2.94
PDHA1-207ENST00000423505 CFTRP13569 1480 aa33.42■■■□□ 2.94
PDHA1-207ENST00000423505 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
PDHA1-207ENST00000423505 WDR62O43379 1518 aa33.37■■■□□ 2.93
PDHA1-207ENST00000423505 FANCD2Q9BXW9 1451 aa33.37■■■□□ 2.93
PDHA1-207ENST00000423505 PRDM2Q13029 1718 aa33.34■■■□□ 2.93
PDHA1-207ENST00000423505 CCDC88BA6NC98 1476 aa33.25■■■□□ 2.91
PDHA1-207ENST00000423505 URB2Q14146 1524 aaKnown RBP33.09■■■□□ 2.89
PDHA1-207ENST00000423505 TOPBP1Q92547 1522 aa32.8■■■□□ 2.84
PDHA1-207ENST00000423505 DNMBPQ6XZF7 1577 aa32.74■■■□□ 2.83
PDHA1-207ENST00000423505 ABCC8Q09428 1581 aa32.7■■■□□ 2.83
PDHA1-207ENST00000423505 IFT140Q96RY7 1462 aa32.67■■■□□ 2.82
PDHA1-207ENST00000423505 ZNF608Q9ULD9 1512 aaPredicted RBP32.62■■■□□ 2.81
PDHA1-207ENST00000423505 SUPT5HO00267 1087 aaKnown RBP32.6■■■□□ 2.81
PDHA1-207ENST00000423505 EIF4G3O43432 1585 aaKnown RBP32.54■■■□□ 2.8
PDHA1-207ENST00000423505 TARBP1Q13395 1621 aaKnown RBP32.52■■■□□ 2.8
PDHA1-207ENST00000423505 POLA1P09884 1462 aaPredicted RBP32.48■■■□□ 2.79
PDHA1-207ENST00000423505 OSCARQ8IYS5 282 aa32.42■■■□□ 2.78
PDHA1-207ENST00000423505 CUX1P39880 1505 aa32.37■■■□□ 2.77
PDHA1-207ENST00000423505 AQRO60306 1485 aaKnown RBP eCLIP32.35■■■□□ 2.773e-6■■■□□ 18.4
PDHA1-207ENST00000423505 RAD54L2Q9Y4B4 1467 aa32.35■■■□□ 2.77
PDHA1-207ENST00000423505 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
PDHA1-207ENST00000423505 CHD1O14646 1710 aa32.29■■■□□ 2.76
PDHA1-207ENST00000423505 SOGA1O94964 1423 aa32.29■■■□□ 2.76
PDHA1-207ENST00000423505 TRIM41Q8WV44 630 aa32.23■■■□□ 2.75
PDHA1-207ENST00000423505 WDR97A6NE52 1622 aa32.2■■■□□ 2.75
PDHA1-207ENST00000423505 TDRD9Q8NDG6 1382 aaKnown RBP32.19■■■□□ 2.74
PDHA1-207ENST00000423505 RIMBP3CA6NJZ7 1639 aa32.12■■■□□ 2.73
PDHA1-207ENST00000423505 RIMBP3BA6NNM3 1639 aa32.12■■■□□ 2.73
PDHA1-207ENST00000423505 RIMBP3Q9UFD9 1639 aa32.12■■■□□ 2.73
PDHA1-207ENST00000423505 PBRM1Q86U86 1689 aa32.06■■■□□ 2.72
PDHA1-207ENST00000423505 SNAPC4Q5SXM2 1469 aa32.06■■■□□ 2.72
PDHA1-207ENST00000423505 FBLN2P98095 1184 aa32.05■■■□□ 2.72
PDHA1-207ENST00000423505 BIVM-ERCC5R4GMW8 1640 aa32.01■■■□□ 2.72
PDHA1-207ENST00000423505 ARHGEF11O15085 1522 aa32■■■□□ 2.71
PDHA1-207ENST00000423505 GRIN2BQ13224 1484 aa31.99■■■□□ 2.71
PDHA1-207ENST00000423505 MAGI1Q96QZ7 1491 aaPredicted RBP31.97■■■□□ 2.71
PDHA1-207ENST00000423505 TOP2BQ02880 1626 aa31.97■■■□□ 2.71
PDHA1-207ENST00000423505 SYNJ1O43426 1573 aa31.97■■■□□ 2.71
PDHA1-207ENST00000423505 ABCA5Q8WWZ7 1642 aa31.97■■■□□ 2.71
PDHA1-207ENST00000423505 ABCA10Q8WWZ4 1543 aa31.96■■■□□ 2.71
PDHA1-207ENST00000423505 GAPVD1Q14C86 1478 aa31.94■■■□□ 2.7
PDHA1-207ENST00000423505 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
PDHA1-207ENST00000423505 SYNJ2O15056 1496 aa31.85■■■□□ 2.69
PDHA1-207ENST00000423505 CHMP7Q8WUX9 453 aaPredicted RBP31.84■■■□□ 2.69
PDHA1-207ENST00000423505 CLASP1Q7Z460 1538 aa31.82■■■□□ 2.68
PDHA1-207ENST00000423505 ARAP1Q96P48 1450 aa31.71■■■□□ 2.67
PDHA1-207ENST00000423505 ADAMTS12P58397 1594 aa31.69■■■□□ 2.66
PDHA1-207ENST00000423505 CYB5RLQ6IPT4 315 aa31.66■■■□□ 2.66
PDHA1-207ENST00000423505 GRIN2AQ12879 1464 aa31.6■■■□□ 2.65
PDHA1-207ENST00000423505 ERICH3Q5RHP9 1530 aa31.59■■■□□ 2.65
PDHA1-207ENST00000423505 CEP170Q5SW79 1584 aa31.52■■■□□ 2.64
PDHA1-207ENST00000423505 FHAD1B1AJZ9 1412 aa31.52■■■□□ 2.64
PDHA1-207ENST00000423505 NUP160Q12769 1436 aa31.46■■■□□ 2.63
PDHA1-207ENST00000423505 ERCC6L2Q5T890 1561 aa31.37■■■□□ 2.61
PDHA1-207ENST00000423505 SHROOM2Q13796 1616 aa31.36■■■□□ 2.61
PDHA1-207ENST00000423505 KIF27Q86VH2 1401 aa31.28■■■□□ 2.6
PDHA1-207ENST00000423505 CUL7Q14999 1698 aa31.27■■■□□ 2.6
PDHA1-207ENST00000423505 RUSC2Q8N2Y8 1516 aa31.25■■■□□ 2.59
PDHA1-207ENST00000423505 TRHP20396 242 aaPredicted RBP31.22■■■□□ 2.59
PDHA1-207ENST00000423505 IGF1RP08069 1367 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms