RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 NISCHQ9Y2I1 1504 aa47.88■■■■■ 5.26
CD55-203ENST00000367063 CCDC180Q9P1Z9 1646 aa42.25■■■■■ 4.35
CD55-203ENST00000367063 ABCC9O60706 1549 aa40.77■■■■■ 4.12
CD55-203ENST00000367063 ZCCHC6Q5VYS8 1495 aaKnown RBP40.02■■■■■ 4
CD55-203ENST00000367063 DCAF8L2P0C7V8 631 aa39.85■■■■□ 3.97
CD55-203ENST00000367063 DCAF1Q9Y4B6 1507 aa39.6■■■■□ 3.93
CD55-203ENST00000367063 NACADO15069 1562 aa39.57■■■■□ 3.92
CD55-203ENST00000367063 MYO15BQ96JP2 1530 aa39.51■■■■□ 3.92
CD55-203ENST00000367063 RB1CC1Q8TDY2 1594 aa39.47■■■■□ 3.91
CD55-203ENST00000367063 SCRIBQ14160 1630 aa38.68■■■■□ 3.78
CD55-203ENST00000367063 UNC13AQ9UPW8 1703 aa38.61■■■■□ 3.77
CD55-203ENST00000367063 SHROOM4Q9ULL8 1493 aa38.33■■■■□ 3.73
CD55-203ENST00000367063 BICRAQ9NZM4 1560 aa38.24■■■■□ 3.71
CD55-203ENST00000367063 PABPN1Q86U42 306 aaKnown RBP eCLIP38.23■■■■□ 3.71
CD55-203ENST00000367063 CECR2Q9BXF3 1484 aa37.25■■■■□ 3.55
CD55-203ENST00000367063 EIF4G1Q04637 1599 aaKnown RBP37.19■■■■□ 3.54
CD55-203ENST00000367063 BAZ1AQ9NRL2 1556 aaPredicted RBP37.07■■■■□ 3.52
CD55-203ENST00000367063 SMARCA4P51532 1647 aa37.02■■■■□ 3.52
CD55-203ENST00000367063 MROH2BQ7Z745 1585 aa36.94■■■■□ 3.5
CD55-203ENST00000367063 CC2D2AQ9P2K1 1620 aa36.89■■■■□ 3.5
CD55-203ENST00000367063 DNAJC5BQ9UF47 199 aa36.8■■■■□ 3.48
CD55-203ENST00000367063 RSF1Q96T23 1441 aaPredicted RBP36.75■■■■□ 3.47
CD55-203ENST00000367063 ATAD2BQ9ULI0 1458 aa36.64■■■■□ 3.46
CD55-203ENST00000367063 SMARCA2P51531 1590 aa36.63■■■■□ 3.45
CD55-203ENST00000367063 PEG3Q9GZU2 1588 aa36.61■■■■□ 3.45
CD55-203ENST00000367063 WIZO95785 1651 aa36.59■■■■□ 3.45
CD55-203ENST00000367063 NCAPD3P42695 1498 aa36.5■■■■□ 3.43
CD55-203ENST00000367063 SUPT5HO00267 1087 aaKnown RBP36.41■■■■□ 3.42
CD55-203ENST00000367063 BAZ1BQ9UIG0 1483 aaKnown RBP36.4■■■■□ 3.42
CD55-203ENST00000367063 HMGXB3Q12766 1538 aa36.38■■■■□ 3.41
CD55-203ENST00000367063 TOP2AP11388 1531 aaKnown RBP36.21■■■■□ 3.39
CD55-203ENST00000367063 CCDC88BA6NC98 1476 aa35.79■■■■□ 3.32
CD55-203ENST00000367063 CADPSQ9ULU8 1353 aa35.5■■■■□ 3.27
CD55-203ENST00000367063 NESP48681 1621 aa35.48■■■■□ 3.27
CD55-203ENST00000367063 LAMC3Q9Y6N6 1575 aa35.44■■■■□ 3.26
CD55-203ENST00000367063 CFTRP13569 1480 aa35.42■■■■□ 3.26
CD55-203ENST00000367063 PRDM2Q13029 1718 aa35.21■■■■□ 3.23
CD55-203ENST00000367063 PDS5BQ9NTI5 1447 aa35.2■■■■□ 3.23
CD55-203ENST00000367063 FANCD2Q9BXW9 1451 aa35.1■■■■□ 3.21
CD55-203ENST00000367063 ERCC6Q03468 1493 aa35.1■■■■□ 3.21
CD55-203ENST00000367063 KIF21AQ7Z4S6 1674 aa35.07■■■■□ 3.2
CD55-203ENST00000367063 CEP164Q9UPV0 1460 aa35■■■■□ 3.19
CD55-203ENST00000367063 MRC2Q9UBG0 1479 aa34.79■■■■□ 3.16
CD55-203ENST00000367063 THOC2Q8NI27 1593 aaKnown RBP34.75■■■■□ 3.15
CD55-203ENST00000367063 ABCC8Q09428 1581 aa34.72■■■■□ 3.15
CD55-203ENST00000367063 URB2Q14146 1524 aaKnown RBP34.7■■■■□ 3.15
CD55-203ENST00000367063 WDR62O43379 1518 aa34.65■■■■□ 3.14
CD55-203ENST00000367063 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
CD55-203ENST00000367063 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
CD55-203ENST00000367063 TOPBP1Q92547 1522 aa34.61■■■■□ 3.13
CD55-203ENST00000367063 CUX1P39880 1505 aa34.6■■■■□ 3.13
CD55-203ENST00000367063 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
CD55-203ENST00000367063 TOP2BQ02880 1626 aa34.48■■■■□ 3.11
CD55-203ENST00000367063 BIVM-ERCC5R4GMW8 1640 aa34.46■■■■□ 3.11
CD55-203ENST00000367063 CUX2O14529 1486 aa34.41■■■■□ 3.1
CD55-203ENST00000367063 FGD5Q6ZNL6 1462 aa34.39■■■■□ 3.1
CD55-203ENST00000367063 POLA1P09884 1462 aaPredicted RBP34.37■■■■□ 3.09
CD55-203ENST00000367063 TRIM41Q8WV44 630 aa34.33■■■■□ 3.09
CD55-203ENST00000367063 CHIC1Q5VXU3 224 aa34.32■■■■□ 3.08
CD55-203ENST00000367063 SOGA1O94964 1423 aa34.24■■■■□ 3.07
CD55-203ENST00000367063 RAD54L2Q9Y4B4 1467 aa34.23■■■■□ 3.07
CD55-203ENST00000367063 IFT140Q96RY7 1462 aa34.22■■■■□ 3.07
CD55-203ENST00000367063 TARBP1Q13395 1621 aaKnown RBP34.17■■■■□ 3.06
CD55-203ENST00000367063 ABCA10Q8WWZ4 1543 aa34.07■■■■□ 3.04
CD55-203ENST00000367063 WDR97A6NE52 1622 aa34.05■■■■□ 3.04
CD55-203ENST00000367063 ZNF608Q9ULD9 1512 aaPredicted RBP34.04■■■■□ 3.04
CD55-203ENST00000367063 TDRD9Q8NDG6 1382 aaKnown RBP33.99■■■■□ 3.03
CD55-203ENST00000367063 AQRO60306 1485 aaKnown RBP eCLIP33.94■■■■□ 3.023e-7■■■■□ 25.8
CD55-203ENST00000367063 EIF4G3O43432 1585 aaKnown RBP33.93■■■■□ 3.02
CD55-203ENST00000367063 ABCA5Q8WWZ7 1642 aa33.88■■■■□ 3.01
CD55-203ENST00000367063 GAPVD1Q14C86 1478 aa33.87■■■■□ 3.01
CD55-203ENST00000367063 KIF27Q86VH2 1401 aa33.86■■■■□ 3.01
CD55-203ENST00000367063 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
CD55-203ENST00000367063 GRIN2BQ13224 1484 aa33.75■■■□□ 2.99
CD55-203ENST00000367063 PBRM1Q86U86 1689 aa33.75■■■□□ 2.99
CD55-203ENST00000367063 ERICH3Q5RHP9 1530 aa33.67■■■□□ 2.98
CD55-203ENST00000367063 FAM9AQ8IZU1 332 aaPredicted RBP33.65■■■□□ 2.98
CD55-203ENST00000367063 EEA1Q15075 1411 aa33.64■■■□□ 2.98
CD55-203ENST00000367063 SNAPC4Q5SXM2 1469 aa33.64■■■□□ 2.98
CD55-203ENST00000367063 IGF1RP08069 1367 aa33.63■■■□□ 2.97
CD55-203ENST00000367063 MAGI1Q96QZ7 1491 aaPredicted RBP33.58■■■□□ 2.97
CD55-203ENST00000367063 CSRNP3Q8WYN3 585 aa33.54■■■□□ 2.96
CD55-203ENST00000367063 ADAMTS12P58397 1594 aa33.51■■■□□ 2.95
CD55-203ENST00000367063 CUL7Q14999 1698 aa33.51■■■□□ 2.95
CD55-203ENST00000367063 FHAD1B1AJZ9 1412 aa33.48■■■□□ 2.95
CD55-203ENST00000367063 CARMIL1Q5VZK9 1371 aa33.46■■■□□ 2.95
CD55-203ENST00000367063 FBLN2P98095 1184 aa33.45■■■□□ 2.95
CD55-203ENST00000367063 SYNJ2O15056 1496 aa33.45■■■□□ 2.95
CD55-203ENST00000367063 CHMP7Q8WUX9 453 aaPredicted RBP33.43■■■□□ 2.94
CD55-203ENST00000367063 CHD1O14646 1710 aa33.38■■■□□ 2.93
CD55-203ENST00000367063 PRXQ9BXM0 1461 aa33.37■■■□□ 2.93
CD55-203ENST00000367063 RAPGEF2Q9Y4G8 1499 aa33.33■■■□□ 2.93
CD55-203ENST00000367063 GRIN2AQ12879 1464 aa33.33■■■□□ 2.93
CD55-203ENST00000367063 KIF21BO75037 1637 aa33.25■■■□□ 2.91
CD55-203ENST00000367063 EHMT2Q96KQ7 1210 aa33.2■■■□□ 2.91
CD55-203ENST00000367063 OSCARQ8IYS5 282 aa33.17■■■□□ 2.9
CD55-203ENST00000367063 CEP170Q5SW79 1584 aa33.13■■■□□ 2.89
CD55-203ENST00000367063 GOLGA3Q08378 1498 aa33.13■■■□□ 2.89
CD55-203ENST00000367063 NUP160Q12769 1436 aa33.13■■■□□ 2.89
CD55-203ENST00000367063 UBTFP17480 764 aaKnown RBP33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms