RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 NISCHQ9Y2I1 1504 aa20.57■□□□□ 0.88
NPC1L1-202ENST00000381160 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
NPC1L1-202ENST00000381160 SUPT5HO00267 1087 aaKnown RBP18.86■□□□□ 0.61
NPC1L1-202ENST00000381160 HRCP23327 699 aa18.62■□□□□ 0.57
NPC1L1-202ENST00000381160 PCGF6Q9BYE7 350 aa18.57■□□□□ 0.56
NPC1L1-202ENST00000381160 PPARGC1BQ86YN6 1023 aaKnown RBP18.45■□□□□ 0.54
NPC1L1-202ENST00000381160 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
NPC1L1-202ENST00000381160 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
NPC1L1-202ENST00000381160 DCAF8L2P0C7V8 631 aa18.14■□□□□ 0.49
NPC1L1-202ENST00000381160 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
NPC1L1-202ENST00000381160 LOC105371045A0A1W2PR82 267 aa17.94■□□□□ 0.46
NPC1L1-202ENST00000381160 TRIM26Q12899 539 aaPredicted RBP17.77■□□□□ 0.44
NPC1L1-202ENST00000381160 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
NPC1L1-202ENST00000381160 MYT1Q01538 1121 aa17.63■□□□□ 0.41
NPC1L1-202ENST00000381160 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
NPC1L1-202ENST00000381160 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
NPC1L1-202ENST00000381160 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
NPC1L1-202ENST00000381160 FAM9AQ8IZU1 332 aaPredicted RBP17.55■□□□□ 0.4
NPC1L1-202ENST00000381160 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
NPC1L1-202ENST00000381160 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
NPC1L1-202ENST00000381160 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.36
NPC1L1-202ENST00000381160 CCDC180Q9P1Z9 1646 aa17.27■□□□□ 0.35
NPC1L1-202ENST00000381160 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
NPC1L1-202ENST00000381160 CENPBP07199 599 aaPredicted RBP17.24■□□□□ 0.35
NPC1L1-202ENST00000381160 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
NPC1L1-202ENST00000381160 NEUROD1Q13562 356 aa17.23■□□□□ 0.35
NPC1L1-202ENST00000381160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
NPC1L1-202ENST00000381160 TTBK1Q5TCY1 1321 aaPredicted RBP17.22■□□□□ 0.35
NPC1L1-202ENST00000381160 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
NPC1L1-202ENST00000381160 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
NPC1L1-202ENST00000381160 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
NPC1L1-202ENST00000381160 ABCC9O60706 1549 aa16.67■□□□□ 0.26
NPC1L1-202ENST00000381160 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
NPC1L1-202ENST00000381160 MIER1Q8N108 512 aa16.62■□□□□ 0.25
NPC1L1-202ENST00000381160 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
NPC1L1-202ENST00000381160 UBTFP17480 764 aaKnown RBP16.59■□□□□ 0.25
NPC1L1-202ENST00000381160 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
NPC1L1-202ENST00000381160 SCRIBQ14160 1630 aa16.49■□□□□ 0.23
NPC1L1-202ENST00000381160 RANGAP1P46060 587 aaPredicted RBP16.47■□□□□ 0.23
NPC1L1-202ENST00000381160 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
NPC1L1-202ENST00000381160 APLP2Q06481 763 aa16.4■□□□□ 0.22
NPC1L1-202ENST00000381160 BCANQ96GW7 911 aa16.33■□□□□ 0.2
NPC1L1-202ENST00000381160 CEP162Q5TB80 1403 aa16.32■□□□□ 0.2
NPC1L1-202ENST00000381160 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
NPC1L1-202ENST00000381160 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
NPC1L1-202ENST00000381160 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
NPC1L1-202ENST00000381160 ANP32EQ9BTT0 268 aa16.22■□□□□ 0.19
NPC1L1-202ENST00000381160 TSHZ2Q9NRE2 1034 aa16.17■□□□□ 0.18
NPC1L1-202ENST00000381160 MROH2BQ7Z745 1585 aa16.15■□□□□ 0.18
NPC1L1-202ENST00000381160 SOGA1O94964 1423 aa16.14■□□□□ 0.17
NPC1L1-202ENST00000381160 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
NPC1L1-202ENST00000381160 TNIKQ9UKE5 1360 aa16.12■□□□□ 0.17
NPC1L1-202ENST00000381160 CCDC88BA6NC98 1476 aa16.12■□□□□ 0.17
NPC1L1-202ENST00000381160 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
NPC1L1-202ENST00000381160 ITGAEP38570 1179 aa16.11■□□□□ 0.17
NPC1L1-202ENST00000381160 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
NPC1L1-202ENST00000381160 NEFLP07196 543 aa16.09■□□□□ 0.17
NPC1L1-202ENST00000381160 FKBP8Q14318 412 aa16.08■□□□□ 0.16
NPC1L1-202ENST00000381160 NACADO15069 1562 aa16.07■□□□□ 0.16
NPC1L1-202ENST00000381160 WIZO95785 1651 aa16.06■□□□□ 0.16
NPC1L1-202ENST00000381160 PRKCSHP14314 528 aaPredicted RBP16.04■□□□□ 0.16
NPC1L1-202ENST00000381160 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
NPC1L1-202ENST00000381160 KCNH8Q96L42 1107 aa15.99■□□□□ 0.15
NPC1L1-202ENST00000381160 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
NPC1L1-202ENST00000381160 GOLGA3Q08378 1498 aa15.96■□□□□ 0.14
NPC1L1-202ENST00000381160 CLIP1P30622 1438 aa15.95■□□□□ 0.14
NPC1L1-202ENST00000381160 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
NPC1L1-202ENST00000381160 DDX10Q13206 875 aaKnown RBP15.91■□□□□ 0.14
NPC1L1-202ENST00000381160 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
NPC1L1-202ENST00000381160 RBM19Q9Y4C8 960 aaKnown RBP15.87■□□□□ 0.13
NPC1L1-202ENST00000381160 EEA1Q15075 1411 aa15.87■□□□□ 0.13
NPC1L1-202ENST00000381160 HIRIP3Q9BW71 556 aaPredicted RBP15.84■□□□□ 0.13
NPC1L1-202ENST00000381160 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
NPC1L1-202ENST00000381160 BAZ1AQ9NRL2 1556 aaPredicted RBP15.8■□□□□ 0.12
NPC1L1-202ENST00000381160 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
NPC1L1-202ENST00000381160 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.12
NPC1L1-202ENST00000381160 IRX6P78412 446 aaPredicted RBP15.77■□□□□ 0.12
NPC1L1-202ENST00000381160 KANK4Q5T7N3 995 aaPredicted RBP15.75■□□□□ 0.11
NPC1L1-202ENST00000381160 ANP32CO43423 234 aa15.75■□□□□ 0.11
NPC1L1-202ENST00000381160 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
NPC1L1-202ENST00000381160 CDK11AQ9UQ88 783 aaPredicted RBP15.72■□□□□ 0.11
NPC1L1-202ENST00000381160 FAM50AQ14320 339 aaKnown RBP15.69■□□□□ 0.1
NPC1L1-202ENST00000381160 SIN3AQ96ST3 1273 aa15.68■□□□□ 0.1
NPC1L1-202ENST00000381160 TOP2AP11388 1531 aaKnown RBP15.68■□□□□ 0.1
NPC1L1-202ENST00000381160 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
NPC1L1-202ENST00000381160 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
NPC1L1-202ENST00000381160 HNRNPUQ00839 825 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPC1L1-202ENST00000381160 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
NPC1L1-202ENST00000381160 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
NPC1L1-202ENST00000381160 MSH5O43196 834 aa15.6■□□□□ 0.09
NPC1L1-202ENST00000381160 NBR1Q14596 966 aa15.57■□□□□ 0.08
NPC1L1-202ENST00000381160 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
NPC1L1-202ENST00000381160 KIF21BO75037 1637 aa15.55■□□□□ 0.08
NPC1L1-202ENST00000381160 RAB3GAP2Q9H2M9 1393 aa15.54■□□□□ 0.08
NPC1L1-202ENST00000381160 CNGB1Q14028 1251 aaPredicted RBP15.53■□□□□ 0.08
NPC1L1-202ENST00000381160 DEKP35659 375 aaKnown RBP15.5■□□□□ 0.07
NPC1L1-202ENST00000381160 SMARCA4P51532 1647 aa15.49■□□□□ 0.07
NPC1L1-202ENST00000381160 CCER2I3L3R5 266 aa15.48■□□□□ 0.07
NPC1L1-202ENST00000381160 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
NPC1L1-202ENST00000381160 P3H3Q8IVL6 736 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms