RNA–Protein interactions for RNA: ENST00000518161.1

TMEM30A-204, Transcript of transmembrane protein 30A, humanhuman

TSL 4

Gene TMEM30A, Length 445 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-204ENST00000518161 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
TMEM30A-204ENST00000518161 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
TMEM30A-204ENST00000518161 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
TMEM30A-204ENST00000518161 SENP3Q9H4L4 574 aaPredicted RBP15.49■□□□□ 0.07
TMEM30A-204ENST00000518161 PLPPR3Q6T4P5 718 aa14.78□□□□□ -0.04
TMEM30A-204ENST00000518161 FOXD1Q16676 465 aa14.45□□□□□ -0.1
TMEM30A-204ENST00000518161 ADRA2BP18089 450 aa14.13□□□□□ -0.15
TMEM30A-204ENST00000518161 PPP6R1Q9UPN7 881 aa14.13□□□□□ -0.15
TMEM30A-204ENST00000518161 PIAS4Q8N2W9 510 aaPredicted RBP13.67□□□□□ -0.22
TMEM30A-204ENST00000518161 MSH5O43196 834 aa13.12□□□□□ -0.31
TMEM30A-204ENST00000518161 KCNA4P22459 653 aa13.11□□□□□ -0.31
TMEM30A-204ENST00000518161 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
TMEM30A-204ENST00000518161 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
TMEM30A-204ENST00000518161 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
TMEM30A-204ENST00000518161 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
TMEM30A-204ENST00000518161 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
TMEM30A-204ENST00000518161 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
TMEM30A-204ENST00000518161 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
TMEM30A-204ENST00000518161 SLC4A1APQ9BWU0 796 aaKnown RBP12.47□□□□□ -0.41
TMEM30A-204ENST00000518161 DMRT2Q9Y5R5 561 aa12.42□□□□□ -0.42
TMEM30A-204ENST00000518161 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
TMEM30A-204ENST00000518161 HOXD11P31277 338 aaPredicted RBP12.22□□□□□ -0.45
TMEM30A-204ENST00000518161 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
TMEM30A-204ENST00000518161 ZBTB22O15209 634 aa12.09□□□□□ -0.47
TMEM30A-204ENST00000518161 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
TMEM30A-204ENST00000518161 DCAF8L1A6NGE4 600 aa12□□□□□ -0.49
TMEM30A-204ENST00000518161 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
TMEM30A-204ENST00000518161 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
TMEM30A-204ENST00000518161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.537e-7■□□□□ 9.1
TMEM30A-204ENST00000518161 POTEDQ86YR6 584 aa11.7□□□□□ -0.54
TMEM30A-204ENST00000518161 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
TMEM30A-204ENST00000518161 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
TMEM30A-204ENST00000518161 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
TMEM30A-204ENST00000518161 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
TMEM30A-204ENST00000518161 SAMD1Q6SPF0 538 aaPredicted RBP11.35□□□□□ -0.59
TMEM30A-204ENST00000518161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
TMEM30A-204ENST00000518161 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
TMEM30A-204ENST00000518161 RNF39Q9H2S5 420 aa11.32□□□□□ -0.6
TMEM30A-204ENST00000518161 SPINK5Q9NQ38 1064 aaPredicted RBP11.23□□□□□ -0.61
TMEM30A-204ENST00000518161 TRHP20396 242 aaPredicted RBP11.17□□□□□ -0.62
TMEM30A-204ENST00000518161 APLP2Q06481 763 aa11.15□□□□□ -0.62
TMEM30A-204ENST00000518161 ZNF219Q9P2Y4 722 aaPredicted RBP11.15□□□□□ -0.62
TMEM30A-204ENST00000518161 CAPN15O75808 1086 aa11.14□□□□□ -0.63
TMEM30A-204ENST00000518161 C1QBPQ07021 282 aaKnown RBP11.13□□□□□ -0.63
TMEM30A-204ENST00000518161 ABCB7O75027 752 aa11.01□□□□□ -0.65
TMEM30A-204ENST00000518161 POLA2Q14181 598 aa11□□□□□ -0.65
TMEM30A-204ENST00000518161 FKBP8Q14318 412 aa10.99□□□□□ -0.65
TMEM30A-204ENST00000518161 CACNB1Q02641 598 aaPredicted RBP10.92□□□□□ -0.66
TMEM30A-204ENST00000518161 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
TMEM30A-204ENST00000518161 DSG3P32926 999 aa10.87□□□□□ -0.67
TMEM30A-204ENST00000518161 FBLN2P98095 1184 aa10.81□□□□□ -0.68
TMEM30A-204ENST00000518161 SPDYE4A6NLX3 237 aa10.73□□□□□ -0.69
TMEM30A-204ENST00000518161 ZBTB12Q9Y330 459 aaPredicted RBP10.68□□□□□ -0.7
TMEM30A-204ENST00000518161 OSCARQ8IYS5 282 aa10.65□□□□□ -0.7
TMEM30A-204ENST00000518161 ZNF692Q9BU19 519 aaPredicted RBP10.54□□□□□ -0.72
TMEM30A-204ENST00000518161 PROM2Q8N271 834 aa10.5□□□□□ -0.73
TMEM30A-204ENST00000518161 SPDYE2BA6NHP3 402 aa10.46□□□□□ -0.73
TMEM30A-204ENST00000518161 SPDYE6P0CI01 402 aa10.46□□□□□ -0.73
TMEM30A-204ENST00000518161 SPDYE2Q495Y8 402 aa10.46□□□□□ -0.73
TMEM30A-204ENST00000518161 SSUH2Q9Y2M2 353 aa10.43□□□□□ -0.74
TMEM30A-204ENST00000518161 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
TMEM30A-204ENST00000518161 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.74
TMEM30A-204ENST00000518161 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
TMEM30A-204ENST00000518161 VASPP50552 380 aaPredicted RBP10.33□□□□□ -0.76
TMEM30A-204ENST00000518161 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
TMEM30A-204ENST00000518161 IFNLR1Q8IU57 520 aaPredicted RBP10.25□□□□□ -0.77
TMEM30A-204ENST00000518161 RBM42Q9BTD8 480 aaKnown RBP10.25□□□□□ -0.77
TMEM30A-204ENST00000518161 AKT1S1Q96B36 256 aa10.2□□□□□ -0.78
TMEM30A-204ENST00000518161 STAG3Q9UJ98 1225 aa10.19□□□□□ -0.78
TMEM30A-204ENST00000518161 REM2Q8IYK8 340 aaPredicted RBP10.18□□□□□ -0.78
TMEM30A-204ENST00000518161 CLEC11AQ9Y240 323 aa10.18□□□□□ -0.78
TMEM30A-204ENST00000518161 MIER1Q8N108 512 aa10.17□□□□□ -0.78
TMEM30A-204ENST00000518161 PLCD3Q8N3E9 789 aa10.17□□□□□ -0.78
TMEM30A-204ENST00000518161 KLHL34Q8N239 644 aa10.15□□□□□ -0.78
TMEM30A-204ENST00000518161 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
TMEM30A-204ENST00000518161 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
TMEM30A-204ENST00000518161 PRR29P0C7W0 189 aa10.05□□□□□ -0.8
TMEM30A-204ENST00000518161 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
TMEM30A-204ENST00000518161 CREBZFQ9NS37 354 aa10□□□□□ -0.81
TMEM30A-204ENST00000518161 PLEKHG5O94827 1062 aa9.99□□□□□ -0.81
TMEM30A-204ENST00000518161 PKD2Q13563 968 aa9.98□□□□□ -0.81
TMEM30A-204ENST00000518161 CHADLQ6NUI6 762 aa9.95□□□□□ -0.82
TMEM30A-204ENST00000518161 CIZ1Q9ULV3 898 aaPredicted RBP9.92□□□□□ -0.82
TMEM30A-204ENST00000518161 DCAF8L2P0C7V8 631 aa9.91□□□□□ -0.82
TMEM30A-204ENST00000518161 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
TMEM30A-204ENST00000518161 MNX1P50219 401 aaPredicted RBP9.9□□□□□ -0.82
TMEM30A-204ENST00000518161 ECM2O94769 699 aaPredicted RBP9.88□□□□□ -0.83
TMEM30A-204ENST00000518161 NUBP1P53384 320 aa9.86□□□□□ -0.83
TMEM30A-204ENST00000518161 PRKAR2AP13861 404 aaKnown RBP9.83□□□□□ -0.84
TMEM30A-204ENST00000518161 DCAF8Q5TAQ9 597 aa9.83□□□□□ -0.84
TMEM30A-204ENST00000518161 CHRDL2Q6WN34 429 aa9.83□□□□□ -0.84
TMEM30A-204ENST00000518161 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
TMEM30A-204ENST00000518161 RGL2O15211 777 aa9.81□□□□□ -0.84
TMEM30A-204ENST00000518161 FXR2P51116 673 aaKnown RBP eCLIP9.79□□□□□ -0.84
TMEM30A-204ENST00000518161 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
TMEM30A-204ENST00000518161 FARP1Q9Y4F1 1045 aaPredicted RBP9.78□□□□□ -0.84
TMEM30A-204ENST00000518161 NPM1P06748 294 aaKnown RBP eCLIP9.75□□□□□ -0.85
TMEM30A-204ENST00000518161 GSE1Q14687 1217 aa9.74□□□□□ -0.85
TMEM30A-204ENST00000518161 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
TMEM30A-204ENST00000518161 TSPYL2Q9H2G4 693 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms