RNA–Protein interactions for RNA: ENST00000367064.7

CD55-204, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD55, Length 2,760 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-204ENST00000367064 NISCHQ9Y2I1 1504 aa34.78■■■■□ 3.16
CD55-204ENST00000367064 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
CD55-204ENST00000367064 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
CD55-204ENST00000367064 SHROOM4Q9ULL8 1493 aa29.19■■■□□ 2.26
CD55-204ENST00000367064 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
CD55-204ENST00000367064 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
CD55-204ENST00000367064 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.15
CD55-204ENST00000367064 MYO15BQ96JP2 1530 aa28.36■■■□□ 2.13
CD55-204ENST00000367064 ABCC9O60706 1549 aa28.19■■■□□ 2.1
CD55-204ENST00000367064 NACADO15069 1562 aa28.05■■■□□ 2.08
CD55-204ENST00000367064 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
CD55-204ENST00000367064 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
CD55-204ENST00000367064 CHIC1Q5VXU3 224 aa27.4■■□□□ 1.98
CD55-204ENST00000367064 UNC13AQ9UPW8 1703 aa27.28■■□□□ 1.96
CD55-204ENST00000367064 RSF1Q96T23 1441 aaPredicted RBP27.1■■□□□ 1.93
CD55-204ENST00000367064 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
CD55-204ENST00000367064 BICRAQ9NZM4 1560 aa26.94■■□□□ 1.9
CD55-204ENST00000367064 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
CD55-204ENST00000367064 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
CD55-204ENST00000367064 WIZO95785 1651 aa26.7■■□□□ 1.86
CD55-204ENST00000367064 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
CD55-204ENST00000367064 LOC105371045A0A1W2PR82 267 aa26.63■■□□□ 1.85
CD55-204ENST00000367064 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
CD55-204ENST00000367064 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
CD55-204ENST00000367064 TOP2AP11388 1531 aaKnown RBP26.42■■□□□ 1.82
CD55-204ENST00000367064 PEG3Q9GZU2 1588 aa26.39■■□□□ 1.82
CD55-204ENST00000367064 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.81
CD55-204ENST00000367064 PCGF6Q9BYE7 350 aa26.22■■□□□ 1.79
CD55-204ENST00000367064 HRCP23327 699 aa26.21■■□□□ 1.79
CD55-204ENST00000367064 SMARCA2P51531 1590 aa26.2■■□□□ 1.78
CD55-204ENST00000367064 EIF4G1Q04637 1599 aaKnown RBP26.18■■□□□ 1.78
CD55-204ENST00000367064 EHMT2Q96KQ7 1210 aa26.17■■□□□ 1.78
CD55-204ENST00000367064 ATAD2BQ9ULI0 1458 aa26.14■■□□□ 1.78
CD55-204ENST00000367064 CCDC88BA6NC98 1476 aa26.13■■□□□ 1.77
CD55-204ENST00000367064 BAZ1BQ9UIG0 1483 aaKnown RBP25.98■■□□□ 1.75
CD55-204ENST00000367064 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
CD55-204ENST00000367064 HMGXB3Q12766 1538 aa25.89■■□□□ 1.74
CD55-204ENST00000367064 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
CD55-204ENST00000367064 PPARGC1BQ86YN6 1023 aaKnown RBP25.83■■□□□ 1.72
CD55-204ENST00000367064 TRIM26Q12899 539 aaPredicted RBP25.75■■□□□ 1.71
CD55-204ENST00000367064 PELP1Q8IZL8 1130 aaKnown RBP25.7■■□□□ 1.71
CD55-204ENST00000367064 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
CD55-204ENST00000367064 SOGA1O94964 1423 aa25.57■■□□□ 1.68
CD55-204ENST00000367064 WRNQ14191 1432 aaPredicted RBP eCLIP25.48■■□□□ 1.67
CD55-204ENST00000367064 RUSC2Q8N2Y8 1516 aa25.48■■□□□ 1.67
CD55-204ENST00000367064 CSRNP3Q8WYN3 585 aa25.4■■□□□ 1.66
CD55-204ENST00000367064 SYNJ1O43426 1573 aa25.39■■□□□ 1.66
CD55-204ENST00000367064 CFTRP13569 1480 aa25.39■■□□□ 1.65
CD55-204ENST00000367064 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
CD55-204ENST00000367064 UBTFP17480 764 aaKnown RBP25.33■■□□□ 1.65
CD55-204ENST00000367064 EEA1Q15075 1411 aa25.31■■□□□ 1.64
CD55-204ENST00000367064 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
CD55-204ENST00000367064 BIVM-ERCC5R4GMW8 1640 aa25.28■■□□□ 1.64
CD55-204ENST00000367064 CEP162Q5TB80 1403 aa25.25■■□□□ 1.63
CD55-204ENST00000367064 TNIKQ9UKE5 1360 aa25.22■■□□□ 1.63
CD55-204ENST00000367064 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
CD55-204ENST00000367064 CADPSQ9ULU8 1353 aa25.2■■□□□ 1.62
CD55-204ENST00000367064 GOLGA3Q08378 1498 aa25.16■■□□□ 1.62
CD55-204ENST00000367064 CUX1P39880 1505 aa25.12■■□□□ 1.61
CD55-204ENST00000367064 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
CD55-204ENST00000367064 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
CD55-204ENST00000367064 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
CD55-204ENST00000367064 KIF21BO75037 1637 aa24.99■■□□□ 1.59
CD55-204ENST00000367064 ZEB1P37275 1124 aaPredicted RBP24.97■■□□□ 1.59
CD55-204ENST00000367064 RAPGEF2Q9Y4G8 1499 aa24.96■■□□□ 1.59
CD55-204ENST00000367064 LAMC3Q9Y6N6 1575 aa24.96■■□□□ 1.59
CD55-204ENST00000367064 FANCD2Q9BXW9 1451 aa24.93■■□□□ 1.58
CD55-204ENST00000367064 NESP48681 1621 aa24.89■■□□□ 1.57
CD55-204ENST00000367064 CLIP1P30622 1438 aa24.88■■□□□ 1.57
CD55-204ENST00000367064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.88■■□□□ 1.57
CD55-204ENST00000367064 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
CD55-204ENST00000367064 DNAJC5BQ9UF47 199 aa24.79■■□□□ 1.56
CD55-204ENST00000367064 MYT1Q01538 1121 aa24.77■■□□□ 1.56
CD55-204ENST00000367064 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
CD55-204ENST00000367064 KIF27Q86VH2 1401 aa24.76■■□□□ 1.55
CD55-204ENST00000367064 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
CD55-204ENST00000367064 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
CD55-204ENST00000367064 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
CD55-204ENST00000367064 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
CD55-204ENST00000367064 VPS8Q8N3P4 1428 aa24.69■■□□□ 1.54
CD55-204ENST00000367064 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
CD55-204ENST00000367064 APLP2Q06481 763 aa24.67■■□□□ 1.54
CD55-204ENST00000367064 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
CD55-204ENST00000367064 CUX2O14529 1486 aa24.63■■□□□ 1.53
CD55-204ENST00000367064 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
CD55-204ENST00000367064 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
CD55-204ENST00000367064 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
CD55-204ENST00000367064 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
CD55-204ENST00000367064 HNRNPUL2Q1KMD3 747 aaKnown RBP24.54■■□□□ 1.52
CD55-204ENST00000367064 IGF1RP08069 1367 aa24.54■■□□□ 1.52
CD55-204ENST00000367064 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
CD55-204ENST00000367064 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
CD55-204ENST00000367064 CARMIL1Q5VZK9 1371 aa24.41■■□□□ 1.5
CD55-204ENST00000367064 ABCA5Q8WWZ7 1642 aa24.4■■□□□ 1.5
CD55-204ENST00000367064 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.49
CD55-204ENST00000367064 CUL7Q14999 1698 aa24.38■■□□□ 1.49
CD55-204ENST00000367064 KANK4Q5T7N3 995 aaPredicted RBP24.38■■□□□ 1.49
CD55-204ENST00000367064 TARBP1Q13395 1621 aaKnown RBP24.37■■□□□ 1.49
CD55-204ENST00000367064 ARHGAP35Q9NRY4 1499 aa24.36■■□□□ 1.49
CD55-204ENST00000367064 WDR62O43379 1518 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms