RNA–Protein interactions for RNA: ENST00000480626.5

PDHB-208, Transcript of pyruvate dehydrogenase E1 beta subunit, humanhuman

TSL 3

Gene PDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHB-208ENST00000480626 NISCHQ9Y2I1 1504 aa43.73■■■■■ 4.59
PDHB-208ENST00000480626 CCDC180Q9P1Z9 1646 aa38.97■■■■□ 3.83
PDHB-208ENST00000480626 ABCC9O60706 1549 aa38.67■■■■□ 3.78
PDHB-208ENST00000480626 RB1CC1Q8TDY2 1594 aa36.93■■■■□ 3.5
PDHB-208ENST00000480626 NACADO15069 1562 aa36.79■■■■□ 3.48
PDHB-208ENST00000480626 DCAF8L2P0C7V8 631 aa36.78■■■■□ 3.48
PDHB-208ENST00000480626 MYO15BQ96JP2 1530 aa36.44■■■■□ 3.42
PDHB-208ENST00000480626 ZCCHC6Q5VYS8 1495 aaKnown RBP36.31■■■■□ 3.4
PDHB-208ENST00000480626 PABPN1Q86U42 306 aaKnown RBP eCLIP36.14■■■■□ 3.38
PDHB-208ENST00000480626 DCAF1Q9Y4B6 1507 aa36.13■■■■□ 3.37
PDHB-208ENST00000480626 UNC13AQ9UPW8 1703 aa36.12■■■■□ 3.37
PDHB-208ENST00000480626 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
PDHB-208ENST00000480626 BICRAQ9NZM4 1560 aa35.91■■■■□ 3.34
PDHB-208ENST00000480626 SCRIBQ14160 1630 aa35.58■■■■□ 3.29
PDHB-208ENST00000480626 SHROOM4Q9ULL8 1493 aa35.37■■■■□ 3.25
PDHB-208ENST00000480626 EIF4G1Q04637 1599 aaKnown RBP34.96■■■■□ 3.19
PDHB-208ENST00000480626 CC2D2AQ9P2K1 1620 aa34.94■■■■□ 3.18
PDHB-208ENST00000480626 CECR2Q9BXF3 1484 aa34.78■■■■□ 3.16
PDHB-208ENST00000480626 NCAPD3P42695 1498 aa34.02■■■■□ 3.04
PDHB-208ENST00000480626 SMARCA4P51532 1647 aa33.99■■■■□ 3.03
PDHB-208ENST00000480626 ATAD2BQ9ULI0 1458 aa33.97■■■■□ 3.03
PDHB-208ENST00000480626 BAZ1AQ9NRL2 1556 aaPredicted RBP33.87■■■■□ 3.01
PDHB-208ENST00000480626 SMARCA2P51531 1590 aa33.83■■■■□ 3.01
PDHB-208ENST00000480626 HMGXB3Q12766 1538 aa33.74■■■□□ 2.99
PDHB-208ENST00000480626 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
PDHB-208ENST00000480626 PEG3Q9GZU2 1588 aa33.68■■■□□ 2.98
PDHB-208ENST00000480626 BAZ1BQ9UIG0 1483 aaKnown RBP33.61■■■□□ 2.97
PDHB-208ENST00000480626 NESP48681 1621 aa33.36■■■□□ 2.93
PDHB-208ENST00000480626 WIZO95785 1651 aa33.31■■■□□ 2.92
PDHB-208ENST00000480626 ERCC6Q03468 1493 aa33.31■■■□□ 2.92
PDHB-208ENST00000480626 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
PDHB-208ENST00000480626 LAMC3Q9Y6N6 1575 aa33.13■■■□□ 2.89
PDHB-208ENST00000480626 CUX2O14529 1486 aa33.12■■■□□ 2.89
PDHB-208ENST00000480626 CADPSQ9ULU8 1353 aa33.01■■■□□ 2.88
PDHB-208ENST00000480626 PDS5BQ9NTI5 1447 aa32.94■■■□□ 2.86
PDHB-208ENST00000480626 KIF21AQ7Z4S6 1674 aa32.88■■■□□ 2.85
PDHB-208ENST00000480626 THOC2Q8NI27 1593 aaKnown RBP32.88■■■□□ 2.85
PDHB-208ENST00000480626 TOP2AP11388 1531 aaKnown RBP32.88■■■□□ 2.85
PDHB-208ENST00000480626 DNAJC5Q9H3Z4 198 aa32.75■■■□□ 2.83
PDHB-208ENST00000480626 CFTRP13569 1480 aa32.71■■■□□ 2.83
PDHB-208ENST00000480626 MRC2Q9UBG0 1479 aa32.62■■■□□ 2.81
PDHB-208ENST00000480626 FANCD2Q9BXW9 1451 aa32.6■■■□□ 2.81
PDHB-208ENST00000480626 CCDC88BA6NC98 1476 aa32.58■■■□□ 2.81
PDHB-208ENST00000480626 CEP164Q9UPV0 1460 aa32.56■■■□□ 2.8
PDHB-208ENST00000480626 WDR62O43379 1518 aa32.53■■■□□ 2.8
PDHB-208ENST00000480626 URB2Q14146 1524 aaKnown RBP32.32■■■□□ 2.76
PDHB-208ENST00000480626 PRDM2Q13029 1718 aa32.31■■■□□ 2.76
PDHB-208ENST00000480626 TOPBP1Q92547 1522 aa32.03■■■□□ 2.72
PDHB-208ENST00000480626 SUPT5HO00267 1087 aaKnown RBP32.02■■■□□ 2.72
PDHB-208ENST00000480626 ABCC8Q09428 1581 aa31.96■■■□□ 2.71
PDHB-208ENST00000480626 DNMBPQ6XZF7 1577 aa31.92■■■□□ 2.7
PDHB-208ENST00000480626 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
PDHB-208ENST00000480626 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
PDHB-208ENST00000480626 OSCARQ8IYS5 282 aa31.75■■■□□ 2.67
PDHB-208ENST00000480626 POLA1P09884 1462 aaPredicted RBP31.73■■■□□ 2.67
PDHB-208ENST00000480626 TARBP1Q13395 1621 aaKnown RBP31.72■■■□□ 2.67
PDHB-208ENST00000480626 AQRO60306 1485 aaKnown RBP eCLIP31.65■■■□□ 2.661e-6■■■□□ 17.5
PDHB-208ENST00000480626 RAD54L2Q9Y4B4 1467 aa31.65■■■□□ 2.66
PDHB-208ENST00000480626 EIF4G3O43432 1585 aaKnown RBP31.64■■■□□ 2.66
PDHB-208ENST00000480626 CUX1P39880 1505 aa31.64■■■□□ 2.66
PDHB-208ENST00000480626 SOGA1O94964 1423 aa31.62■■■□□ 2.65
PDHB-208ENST00000480626 FGD5Q6ZNL6 1462 aa31.59■■■□□ 2.65
PDHB-208ENST00000480626 TDRD9Q8NDG6 1382 aaKnown RBP31.52■■■□□ 2.64
PDHB-208ENST00000480626 TRIM41Q8WV44 630 aa31.44■■■□□ 2.62
PDHB-208ENST00000480626 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
PDHB-208ENST00000480626 FBLN2P98095 1184 aa31.34■■■□□ 2.61
PDHB-208ENST00000480626 CHD1O14646 1710 aa31.34■■■□□ 2.61
PDHB-208ENST00000480626 SNAPC4Q5SXM2 1469 aa31.28■■■□□ 2.6
PDHB-208ENST00000480626 GRIN2BQ13224 1484 aa31.26■■■□□ 2.59
PDHB-208ENST00000480626 WRNQ14191 1432 aaPredicted RBP eCLIP31.25■■■□□ 2.59
PDHB-208ENST00000480626 ABCA10Q8WWZ4 1543 aa31.25■■■□□ 2.59
PDHB-208ENST00000480626 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
PDHB-208ENST00000480626 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
PDHB-208ENST00000480626 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
PDHB-208ENST00000480626 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
PDHB-208ENST00000480626 TOP2BQ02880 1626 aa31.21■■■□□ 2.59
PDHB-208ENST00000480626 SYNJ1O43426 1573 aa31.21■■■□□ 2.59
PDHB-208ENST00000480626 MAGI1Q96QZ7 1491 aaPredicted RBP31.2■■■□□ 2.58
PDHB-208ENST00000480626 BIVM-ERCC5R4GMW8 1640 aa31.2■■■□□ 2.58
PDHB-208ENST00000480626 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
PDHB-208ENST00000480626 CHMP7Q8WUX9 453 aaPredicted RBP31.18■■■□□ 2.58
PDHB-208ENST00000480626 ABCA5Q8WWZ7 1642 aa31.14■■■□□ 2.58
PDHB-208ENST00000480626 PBRM1Q86U86 1689 aa31.12■■■□□ 2.57
PDHB-208ENST00000480626 SYNJ2O15056 1496 aa31.11■■■□□ 2.57
PDHB-208ENST00000480626 CLASP1Q7Z460 1538 aa31.02■■■□□ 2.56
PDHB-208ENST00000480626 CYB5RLQ6IPT4 315 aa30.99■■■□□ 2.55
PDHB-208ENST00000480626 ARAP1Q96P48 1450 aa30.93■■■□□ 2.54
PDHB-208ENST00000480626 ADAMTS12P58397 1594 aa30.87■■■□□ 2.53
PDHB-208ENST00000480626 GRIN2AQ12879 1464 aa30.86■■■□□ 2.53
PDHB-208ENST00000480626 ERICH3Q5RHP9 1530 aa30.85■■■□□ 2.53
PDHB-208ENST00000480626 FHAD1B1AJZ9 1412 aa30.83■■■□□ 2.53
PDHB-208ENST00000480626 NUP160Q12769 1436 aa30.76■■■□□ 2.51
PDHB-208ENST00000480626 CEP170Q5SW79 1584 aa30.74■■■□□ 2.51
PDHB-208ENST00000480626 IGF1RP08069 1367 aa30.65■■■□□ 2.5
PDHB-208ENST00000480626 KIF27Q86VH2 1401 aa30.62■■■□□ 2.49
PDHB-208ENST00000480626 ERCC6L2Q5T890 1561 aa30.61■■■□□ 2.49
PDHB-208ENST00000480626 SHROOM2Q13796 1616 aa30.55■■■□□ 2.48
PDHB-208ENST00000480626 JPH4Q96JJ6 628 aa30.5■■■□□ 2.47
PDHB-208ENST00000480626 TRHP20396 242 aaPredicted RBP30.48■■■□□ 2.47
PDHB-208ENST00000480626 CUL7Q14999 1698 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 322.1 ms