RNA–Protein interactions for RNA: ENST00000535589.3

ACTR3-208, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 2 BASIC

Gene ACTR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-208ENST00000535589 NISCHQ9Y2I1 1504 aa37.95■■■■□ 3.67
ACTR3-208ENST00000535589 CCDC180Q9P1Z9 1646 aa33.26■■■□□ 2.91
ACTR3-208ENST00000535589 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
ACTR3-208ENST00000535589 ABCC9O60706 1549 aa31.53■■■□□ 2.64
ACTR3-208ENST00000535589 DCAF1Q9Y4B6 1507 aa31.42■■■□□ 2.62
ACTR3-208ENST00000535589 DCAF8L2P0C7V8 631 aa31.31■■■□□ 2.6
ACTR3-208ENST00000535589 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.58
ACTR3-208ENST00000535589 NACADO15069 1562 aa31■■■□□ 2.55
ACTR3-208ENST00000535589 RB1CC1Q8TDY2 1594 aa30.78■■■□□ 2.52
ACTR3-208ENST00000535589 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
ACTR3-208ENST00000535589 SCRIBQ14160 1630 aa30.47■■■□□ 2.47
ACTR3-208ENST00000535589 UNC13AQ9UPW8 1703 aa30.15■■■□□ 2.42
ACTR3-208ENST00000535589 BICRAQ9NZM4 1560 aa29.83■■■□□ 2.37
ACTR3-208ENST00000535589 PABPN1Q86U42 306 aaKnown RBP eCLIP29.66■■■□□ 2.34
ACTR3-208ENST00000535589 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
ACTR3-208ENST00000535589 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
ACTR3-208ENST00000535589 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
ACTR3-208ENST00000535589 RSF1Q96T23 1441 aaPredicted RBP29.32■■■□□ 2.28
ACTR3-208ENST00000535589 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
ACTR3-208ENST00000535589 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
ACTR3-208ENST00000535589 WIZO95785 1651 aa29.05■■■□□ 2.24
ACTR3-208ENST00000535589 EIF4G1Q04637 1599 aaKnown RBP28.95■■■□□ 2.23
ACTR3-208ENST00000535589 PEG3Q9GZU2 1588 aa28.91■■■□□ 2.22
ACTR3-208ENST00000535589 SMARCA2P51531 1590 aa28.79■■■□□ 2.2
ACTR3-208ENST00000535589 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
ACTR3-208ENST00000535589 TOP2AP11388 1531 aaKnown RBP28.76■■■□□ 2.2
ACTR3-208ENST00000535589 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
ACTR3-208ENST00000535589 NCAPD3P42695 1498 aa28.59■■■□□ 2.17
ACTR3-208ENST00000535589 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
ACTR3-208ENST00000535589 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
ACTR3-208ENST00000535589 CCDC88BA6NC98 1476 aa28.44■■■□□ 2.14
ACTR3-208ENST00000535589 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
ACTR3-208ENST00000535589 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
ACTR3-208ENST00000535589 CFTRP13569 1480 aa27.88■■■□□ 2.05
ACTR3-208ENST00000535589 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
ACTR3-208ENST00000535589 PRDM2Q13029 1718 aa27.8■■■□□ 2.04
ACTR3-208ENST00000535589 ABCC8Q09428 1581 aa27.76■■■□□ 2.03
ACTR3-208ENST00000535589 TRIM41Q8WV44 630 aa27.73■■■□□ 2.03
ACTR3-208ENST00000535589 LAMC3Q9Y6N6 1575 aa27.68■■■□□ 2.02
ACTR3-208ENST00000535589 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.01
ACTR3-208ENST00000535589 NESP48681 1621 aa27.62■■■□□ 2.01
ACTR3-208ENST00000535589 SYNJ1O43426 1573 aa27.52■■■□□ 2
ACTR3-208ENST00000535589 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
ACTR3-208ENST00000535589 TOP2BQ02880 1626 aa27.45■■□□□ 1.99
ACTR3-208ENST00000535589 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.99
ACTR3-208ENST00000535589 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
ACTR3-208ENST00000535589 CUX1P39880 1505 aa27.4■■□□□ 1.98
ACTR3-208ENST00000535589 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
ACTR3-208ENST00000535589 KIF21AQ7Z4S6 1674 aa27.33■■□□□ 1.97
ACTR3-208ENST00000535589 DNMBPQ6XZF7 1577 aa27.26■■□□□ 1.95
ACTR3-208ENST00000535589 TOPBP1Q92547 1522 aa27.2■■□□□ 1.94
ACTR3-208ENST00000535589 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
ACTR3-208ENST00000535589 SOGA1O94964 1423 aa27.18■■□□□ 1.94
ACTR3-208ENST00000535589 FAM9AQ8IZU1 332 aaPredicted RBP27.17■■□□□ 1.94
ACTR3-208ENST00000535589 EEA1Q15075 1411 aa27.15■■□□□ 1.94
ACTR3-208ENST00000535589 FGD5Q6ZNL6 1462 aa27.14■■□□□ 1.94
ACTR3-208ENST00000535589 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
ACTR3-208ENST00000535589 RUSC2Q8N2Y8 1516 aa27.09■■□□□ 1.93
ACTR3-208ENST00000535589 ERCC6Q03468 1493 aa27.08■■□□□ 1.93
ACTR3-208ENST00000535589 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
ACTR3-208ENST00000535589 WDR62O43379 1518 aa26.98■■□□□ 1.91
ACTR3-208ENST00000535589 LOC105371045A0A1W2PR82 267 aa26.98■■□□□ 1.91
ACTR3-208ENST00000535589 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
ACTR3-208ENST00000535589 THOC2Q8NI27 1593 aaKnown RBP26.96■■□□□ 1.91
ACTR3-208ENST00000535589 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
ACTR3-208ENST00000535589 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
ACTR3-208ENST00000535589 ABCA10Q8WWZ4 1543 aa26.92■■□□□ 1.9
ACTR3-208ENST00000535589 CUX2O14529 1486 aa26.91■■□□□ 1.9
ACTR3-208ENST00000535589 WDR97A6NE52 1622 aa26.88■■□□□ 1.89
ACTR3-208ENST00000535589 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
ACTR3-208ENST00000535589 KIF21BO75037 1637 aa26.81■■□□□ 1.88
ACTR3-208ENST00000535589 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
ACTR3-208ENST00000535589 GOLGA3Q08378 1498 aa26.75■■□□□ 1.87
ACTR3-208ENST00000535589 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
ACTR3-208ENST00000535589 ABCA5Q8WWZ7 1642 aa26.73■■□□□ 1.87
ACTR3-208ENST00000535589 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
ACTR3-208ENST00000535589 IGF1RP08069 1367 aa26.72■■□□□ 1.87
ACTR3-208ENST00000535589 ERICH3Q5RHP9 1530 aa26.67■■□□□ 1.86
ACTR3-208ENST00000535589 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
ACTR3-208ENST00000535589 GAPVD1Q14C86 1478 aa26.65■■□□□ 1.86
ACTR3-208ENST00000535589 RAPGEF2Q9Y4G8 1499 aa26.64■■□□□ 1.85
ACTR3-208ENST00000535589 TNIKQ9UKE5 1360 aa26.61■■□□□ 1.85
ACTR3-208ENST00000535589 CUL7Q14999 1698 aa26.6■■□□□ 1.85
ACTR3-208ENST00000535589 UBTFP17480 764 aaKnown RBP26.59■■□□□ 1.85
ACTR3-208ENST00000535589 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.85
ACTR3-208ENST00000535589 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
ACTR3-208ENST00000535589 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
ACTR3-208ENST00000535589 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.84
ACTR3-208ENST00000535589 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
ACTR3-208ENST00000535589 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
ACTR3-208ENST00000535589 CEP162Q5TB80 1403 aa26.43■■□□□ 1.82
ACTR3-208ENST00000535589 ADAMTS12P58397 1594 aa26.4■■□□□ 1.82
ACTR3-208ENST00000535589 FHAD1B1AJZ9 1412 aa26.38■■□□□ 1.81
ACTR3-208ENST00000535589 SNAPC4Q5SXM2 1469 aa26.33■■□□□ 1.81
ACTR3-208ENST00000535589 MAGI1Q96QZ7 1491 aaPredicted RBP26.31■■□□□ 1.8
ACTR3-208ENST00000535589 CLIP1P30622 1438 aa26.29■■□□□ 1.8
ACTR3-208ENST00000535589 CTTNBP2Q8WZ74 1663 aa26.27■■□□□ 1.8
ACTR3-208ENST00000535589 SYNJ2O15056 1496 aa26.2■■□□□ 1.78
ACTR3-208ENST00000535589 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
ACTR3-208ENST00000535589 RANGAP1P46060 587 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms