RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 NISCHQ9Y2I1 1504 aa41.47■■■■■ 4.23
CD55-201ENST00000314754 CCDC180Q9P1Z9 1646 aa35.77■■■■□ 3.32
CD55-201ENST00000314754 ZCCHC6Q5VYS8 1495 aaKnown RBP34.98■■■■□ 3.19
CD55-201ENST00000314754 SHROOM4Q9ULL8 1493 aa34.6■■■■□ 3.13
CD55-201ENST00000314754 DCAF1Q9Y4B6 1507 aa34.25■■■■□ 3.07
CD55-201ENST00000314754 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
CD55-201ENST00000314754 MYO15BQ96JP2 1530 aa33.57■■■□□ 2.96
CD55-201ENST00000314754 SUPT5HO00267 1087 aaKnown RBP33.56■■■□□ 2.96
CD55-201ENST00000314754 ABCC9O60706 1549 aa33.39■■■□□ 2.94
CD55-201ENST00000314754 SCRIBQ14160 1630 aa33.19■■■□□ 2.9
CD55-201ENST00000314754 NACADO15069 1562 aa33.17■■■□□ 2.9
CD55-201ENST00000314754 RB1CC1Q8TDY2 1594 aa32.72■■■□□ 2.83
CD55-201ENST00000314754 RSF1Q96T23 1441 aaPredicted RBP32.48■■■□□ 2.79
CD55-201ENST00000314754 CHIC1Q5VXU3 224 aa32.39■■■□□ 2.78
CD55-201ENST00000314754 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
CD55-201ENST00000314754 CECR2Q9BXF3 1484 aa32.29■■■□□ 2.76
CD55-201ENST00000314754 MROH2BQ7Z745 1585 aa32.14■■■□□ 2.74
CD55-201ENST00000314754 WIZO95785 1651 aa31.98■■■□□ 2.71
CD55-201ENST00000314754 BAZ1AQ9NRL2 1556 aaPredicted RBP31.96■■■□□ 2.71
CD55-201ENST00000314754 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
CD55-201ENST00000314754 SMARCA4P51532 1647 aa31.73■■■□□ 2.67
CD55-201ENST00000314754 PABPN1Q86U42 306 aaKnown RBP eCLIP31.68■■■□□ 2.66
CD55-201ENST00000314754 TOP2AP11388 1531 aaKnown RBP31.52■■■□□ 2.64
CD55-201ENST00000314754 TRIM41Q8WV44 630 aa31.39■■■□□ 2.62
CD55-201ENST00000314754 EIF4G1Q04637 1599 aaKnown RBP31.34■■■□□ 2.61
CD55-201ENST00000314754 LOC105371045A0A1W2PR82 267 aa31.33■■■□□ 2.61
CD55-201ENST00000314754 SMARCA2P51531 1590 aa31.29■■■□□ 2.6
CD55-201ENST00000314754 PEG3Q9GZU2 1588 aa31.29■■■□□ 2.6
CD55-201ENST00000314754 CCDC88BA6NC98 1476 aa31.25■■■□□ 2.59
CD55-201ENST00000314754 ATAD2BQ9ULI0 1458 aa31.04■■■□□ 2.56
CD55-201ENST00000314754 FAM9AQ8IZU1 332 aaPredicted RBP31.01■■■□□ 2.55
CD55-201ENST00000314754 ABCC8Q09428 1581 aa30.96■■■□□ 2.55
CD55-201ENST00000314754 BAZ1BQ9UIG0 1483 aaKnown RBP30.91■■■□□ 2.54
CD55-201ENST00000314754 EHMT2Q96KQ7 1210 aa30.71■■■□□ 2.51
CD55-201ENST00000314754 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
CD55-201ENST00000314754 NCAPD3P42695 1498 aa30.63■■■□□ 2.49
CD55-201ENST00000314754 PCGF6Q9BYE7 350 aa30.6■■■□□ 2.49
CD55-201ENST00000314754 WRNQ14191 1432 aaPredicted RBP eCLIP30.54■■■□□ 2.48
CD55-201ENST00000314754 SOGA1O94964 1423 aa30.48■■■□□ 2.47
CD55-201ENST00000314754 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
CD55-201ENST00000314754 EEA1Q15075 1411 aa30.45■■■□□ 2.47
CD55-201ENST00000314754 RUSC2Q8N2Y8 1516 aa30.38■■■□□ 2.45
CD55-201ENST00000314754 TRIM26Q12899 539 aaPredicted RBP30.33■■■□□ 2.45
CD55-201ENST00000314754 CSRNP3Q8WYN3 585 aa30.25■■■□□ 2.43
CD55-201ENST00000314754 HRCP23327 699 aa30.24■■■□□ 2.43
CD55-201ENST00000314754 TOP2BQ02880 1626 aa30.19■■■□□ 2.42
CD55-201ENST00000314754 CC2D2AQ9P2K1 1620 aa30.17■■■□□ 2.42
CD55-201ENST00000314754 CFTRP13569 1480 aa30.17■■■□□ 2.42
CD55-201ENST00000314754 BIVM-ERCC5R4GMW8 1640 aa30.13■■■□□ 2.41
CD55-201ENST00000314754 TNIKQ9UKE5 1360 aa30.13■■■□□ 2.41
CD55-201ENST00000314754 GOLGA3Q08378 1498 aa30.08■■■□□ 2.41
CD55-201ENST00000314754 CEP162Q5TB80 1403 aa30.05■■■□□ 2.4
CD55-201ENST00000314754 PRDM2Q13029 1718 aa30.04■■■□□ 2.4
CD55-201ENST00000314754 KIF21BO75037 1637 aa30.03■■■□□ 2.4
CD55-201ENST00000314754 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.4
CD55-201ENST00000314754 CUX1P39880 1505 aa29.99■■■□□ 2.39
CD55-201ENST00000314754 UBTFP17480 764 aaKnown RBP29.96■■■□□ 2.39
CD55-201ENST00000314754 PPARGC1BQ86YN6 1023 aaKnown RBP29.92■■■□□ 2.38
CD55-201ENST00000314754 CADPSQ9ULU8 1353 aa29.92■■■□□ 2.38
CD55-201ENST00000314754 RAPGEF2Q9Y4G8 1499 aa29.79■■■□□ 2.36
CD55-201ENST00000314754 KIF27Q86VH2 1401 aa29.7■■■□□ 2.34
CD55-201ENST00000314754 ERICH3Q5RHP9 1530 aa29.69■■■□□ 2.34
CD55-201ENST00000314754 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
CD55-201ENST00000314754 CLIP1P30622 1438 aa29.65■■■□□ 2.34
CD55-201ENST00000314754 FANCD2Q9BXW9 1451 aa29.6■■■□□ 2.33
CD55-201ENST00000314754 NESP48681 1621 aa29.58■■■□□ 2.33
CD55-201ENST00000314754 TTBK1Q5TCY1 1321 aaPredicted RBP29.56■■■□□ 2.32
CD55-201ENST00000314754 FGD5Q6ZNL6 1462 aa29.53■■■□□ 2.32
CD55-201ENST00000314754 VPS8Q8N3P4 1428 aa29.49■■■□□ 2.31
CD55-201ENST00000314754 CUX2O14529 1486 aa29.47■■■□□ 2.31
CD55-201ENST00000314754 ZEB1P37275 1124 aaPredicted RBP29.47■■■□□ 2.31
CD55-201ENST00000314754 RANGAP1P46060 587 aaPredicted RBP29.47■■■□□ 2.31
CD55-201ENST00000314754 LAMC3Q9Y6N6 1575 aa29.46■■■□□ 2.31
CD55-201ENST00000314754 DNAJC5BQ9UF47 199 aa29.45■■■□□ 2.3
CD55-201ENST00000314754 DNMBPQ6XZF7 1577 aa29.44■■■□□ 2.3
CD55-201ENST00000314754 IGF1RP08069 1367 aa29.37■■■□□ 2.29
CD55-201ENST00000314754 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
CD55-201ENST00000314754 POLA1P09884 1462 aaPredicted RBP29.28■■■□□ 2.28
CD55-201ENST00000314754 ARAP1Q96P48 1450 aa29.28■■■□□ 2.28
CD55-201ENST00000314754 RAD54L2Q9Y4B4 1467 aa29.28■■■□□ 2.28
CD55-201ENST00000314754 ABCA10Q8WWZ4 1543 aa29.26■■■□□ 2.27
CD55-201ENST00000314754 CARMIL1Q5VZK9 1371 aa29.24■■■□□ 2.27
CD55-201ENST00000314754 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
CD55-201ENST00000314754 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
CD55-201ENST00000314754 APLP2Q06481 763 aa29.21■■■□□ 2.27
CD55-201ENST00000314754 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.26
CD55-201ENST00000314754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.26
CD55-201ENST00000314754 ARHGAP35Q9NRY4 1499 aa29.13■■■□□ 2.25
CD55-201ENST00000314754 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
CD55-201ENST00000314754 CUL7Q14999 1698 aa29.05■■■□□ 2.24
CD55-201ENST00000314754 CCER1Q8TC90 406 aaPredicted RBP29.03■■■□□ 2.24
CD55-201ENST00000314754 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
CD55-201ENST00000314754 KANK4Q5T7N3 995 aaPredicted RBP28.91■■■□□ 2.22
CD55-201ENST00000314754 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
CD55-201ENST00000314754 GAPVD1Q14C86 1478 aa28.88■■■□□ 2.21
CD55-201ENST00000314754 CTTNBP2Q8WZ74 1663 aa28.87■■■□□ 2.21
CD55-201ENST00000314754 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
CD55-201ENST00000314754 HNRNPUL2Q1KMD3 747 aaKnown RBP28.86■■■□□ 2.21
CD55-201ENST00000314754 MRC2Q9UBG0 1479 aa28.81■■■□□ 2.2
CD55-201ENST00000314754 MAP3K1Q13233 1512 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms