RNA–Protein interactions for RNA: ENST00000538392.1

C12orf57-203, Transcript of chromosome 12 open reading frame 57, humanhuman

TSL 2

Gene C12orf57, Length 979 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf57-203ENST00000538392 NISCHQ9Y2I1 1504 aa46.48■■■■■ 5.03
C12orf57-203ENST00000538392 CCDC180Q9P1Z9 1646 aa41.51■■■■■ 4.24
C12orf57-203ENST00000538392 ABCC9O60706 1549 aa41.07■■■■■ 4.16
C12orf57-203ENST00000538392 RB1CC1Q8TDY2 1594 aa39.29■■■■□ 3.88
C12orf57-203ENST00000538392 NACADO15069 1562 aa39.12■■■■□ 3.85
C12orf57-203ENST00000538392 DCAF8L2P0C7V8 631 aa39.06■■■■□ 3.84
C12orf57-203ENST00000538392 MYO15BQ96JP2 1530 aa38.71■■■■□ 3.79
C12orf57-203ENST00000538392 ZCCHC6Q5VYS8 1495 aaKnown RBP38.62■■■■□ 3.77
C12orf57-203ENST00000538392 DCAF1Q9Y4B6 1507 aa38.4■■■■□ 3.74
C12orf57-203ENST00000538392 UNC13AQ9UPW8 1703 aa38.4■■■■□ 3.74
C12orf57-203ENST00000538392 PABPN1Q86U42 306 aaKnown RBP eCLIP38.3■■■■□ 3.72
C12orf57-203ENST00000538392 BICRAQ9NZM4 1560 aa38.1■■■■□ 3.69
C12orf57-203ENST00000538392 DNAJC5BQ9UF47 199 aa38.03■■■■□ 3.68
C12orf57-203ENST00000538392 SCRIBQ14160 1630 aa37.89■■■■□ 3.66
C12orf57-203ENST00000538392 SHROOM4Q9ULL8 1493 aa37.64■■■■□ 3.62
C12orf57-203ENST00000538392 EIF4G1Q04637 1599 aaKnown RBP37.15■■■■□ 3.54
C12orf57-203ENST00000538392 CC2D2AQ9P2K1 1620 aa37.11■■■■□ 3.53
C12orf57-203ENST00000538392 CECR2Q9BXF3 1484 aa36.94■■■■□ 3.5
C12orf57-203ENST00000538392 SMARCA4P51532 1647 aa36.17■■■■□ 3.38
C12orf57-203ENST00000538392 NCAPD3P42695 1498 aa36.09■■■■□ 3.37
C12orf57-203ENST00000538392 BAZ1AQ9NRL2 1556 aaPredicted RBP36.06■■■■□ 3.36
C12orf57-203ENST00000538392 ATAD2BQ9ULI0 1458 aa36.06■■■■□ 3.36
C12orf57-203ENST00000538392 SMARCA2P51531 1590 aa36.01■■■■□ 3.35
C12orf57-203ENST00000538392 HMGXB3Q12766 1538 aa35.89■■■■□ 3.34
C12orf57-203ENST00000538392 MROH2BQ7Z745 1585 aa35.82■■■■□ 3.32
C12orf57-203ENST00000538392 PEG3Q9GZU2 1588 aa35.78■■■■□ 3.32
C12orf57-203ENST00000538392 BAZ1BQ9UIG0 1483 aaKnown RBP35.78■■■■□ 3.32
C12orf57-203ENST00000538392 ERCC6Q03468 1493 aa35.44■■■■□ 3.26
C12orf57-203ENST00000538392 WIZO95785 1651 aa35.43■■■■□ 3.26
C12orf57-203ENST00000538392 NESP48681 1621 aa35.4■■■■□ 3.26
C12orf57-203ENST00000538392 RSF1Q96T23 1441 aaPredicted RBP35.24■■■■□ 3.23
C12orf57-203ENST00000538392 LAMC3Q9Y6N6 1575 aa35.22■■■■□ 3.23
C12orf57-203ENST00000538392 CUX2O14529 1486 aa35.17■■■■□ 3.22
C12orf57-203ENST00000538392 CADPSQ9ULU8 1353 aa35.02■■■■□ 3.2
C12orf57-203ENST00000538392 TOP2AP11388 1531 aaKnown RBP35.01■■■■□ 3.2
C12orf57-203ENST00000538392 PDS5BQ9NTI5 1447 aa35.01■■■■□ 3.2
C12orf57-203ENST00000538392 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
C12orf57-203ENST00000538392 THOC2Q8NI27 1593 aaKnown RBP34.95■■■■□ 3.18
C12orf57-203ENST00000538392 CFTRP13569 1480 aa34.72■■■■□ 3.15
C12orf57-203ENST00000538392 MRC2Q9UBG0 1479 aa34.69■■■■□ 3.14
C12orf57-203ENST00000538392 FANCD2Q9BXW9 1451 aa34.65■■■■□ 3.14
C12orf57-203ENST00000538392 CEP164Q9UPV0 1460 aa34.65■■■■□ 3.14
C12orf57-203ENST00000538392 CCDC88BA6NC98 1476 aa34.6■■■■□ 3.13
C12orf57-203ENST00000538392 DNAJC5Q9H3Z4 198 aa34.59■■■■□ 3.13
C12orf57-203ENST00000538392 WDR62O43379 1518 aa34.57■■■■□ 3.12
C12orf57-203ENST00000538392 PRDM2Q13029 1718 aa34.46■■■■□ 3.11
C12orf57-203ENST00000538392 URB2Q14146 1524 aaKnown RBP34.33■■■■□ 3.09
C12orf57-203ENST00000538392 SUPT5HO00267 1087 aaKnown RBP34.08■■■■□ 3.05
C12orf57-203ENST00000538392 TOPBP1Q92547 1522 aa34.04■■■■□ 3.04
C12orf57-203ENST00000538392 ABCC8Q09428 1581 aa34■■■■□ 3.03
C12orf57-203ENST00000538392 DNMBPQ6XZF7 1577 aa33.98■■■■□ 3.03
C12orf57-203ENST00000538392 IFT140Q96RY7 1462 aa33.94■■■■□ 3.02
C12orf57-203ENST00000538392 ZNF608Q9ULD9 1512 aaPredicted RBP33.83■■■■□ 3.01
C12orf57-203ENST00000538392 POLA1P09884 1462 aaPredicted RBP33.73■■■□□ 2.99
C12orf57-203ENST00000538392 TARBP1Q13395 1621 aaKnown RBP33.71■■■□□ 2.99
C12orf57-203ENST00000538392 EIF4G3O43432 1585 aaKnown RBP33.69■■■□□ 2.98
C12orf57-203ENST00000538392 OSCARQ8IYS5 282 aa33.65■■■□□ 2.98
C12orf57-203ENST00000538392 CUX1P39880 1505 aa33.63■■■□□ 2.97
C12orf57-203ENST00000538392 FGD5Q6ZNL6 1462 aa33.6■■■□□ 2.97
C12orf57-203ENST00000538392 RAD54L2Q9Y4B4 1467 aa33.6■■■□□ 2.97
C12orf57-203ENST00000538392 AQRO60306 1485 aaKnown RBP eCLIP33.58■■■□□ 2.971e-13■■■■□ 24.4
C12orf57-203ENST00000538392 SOGA1O94964 1423 aa33.58■■■□□ 2.97
C12orf57-203ENST00000538392 TDRD9Q8NDG6 1382 aaKnown RBP33.47■■■□□ 2.95
C12orf57-203ENST00000538392 WDR97A6NE52 1622 aa33.39■■■□□ 2.94
C12orf57-203ENST00000538392 CHD1O14646 1710 aa33.36■■■□□ 2.93
C12orf57-203ENST00000538392 TRIM41Q8WV44 630 aa33.33■■■□□ 2.93
C12orf57-203ENST00000538392 FBLN2P98095 1184 aa33.3■■■□□ 2.92
C12orf57-203ENST00000538392 SNAPC4Q5SXM2 1469 aa33.27■■■□□ 2.92
C12orf57-203ENST00000538392 WRNQ14191 1432 aaPredicted RBP eCLIP33.27■■■□□ 2.92
C12orf57-203ENST00000538392 GRIN2BQ13224 1484 aa33.25■■■□□ 2.91
C12orf57-203ENST00000538392 TOP2BQ02880 1626 aa33.23■■■□□ 2.91
C12orf57-203ENST00000538392 BIVM-ERCC5R4GMW8 1640 aa33.23■■■□□ 2.91
C12orf57-203ENST00000538392 ABCA10Q8WWZ4 1543 aa33.23■■■□□ 2.91
C12orf57-203ENST00000538392 SYNJ1O43426 1573 aa33.21■■■□□ 2.91
C12orf57-203ENST00000538392 GAPVD1Q14C86 1478 aa33.19■■■□□ 2.9
C12orf57-203ENST00000538392 MAGI1Q96QZ7 1491 aaPredicted RBP33.19■■■□□ 2.9
C12orf57-203ENST00000538392 RIMBP3CA6NJZ7 1639 aa33.17■■■□□ 2.9
C12orf57-203ENST00000538392 RIMBP3BA6NNM3 1639 aa33.17■■■□□ 2.9
C12orf57-203ENST00000538392 RIMBP3Q9UFD9 1639 aa33.17■■■□□ 2.9
C12orf57-203ENST00000538392 PBRM1Q86U86 1689 aa33.17■■■□□ 2.9
C12orf57-203ENST00000538392 ABCA5Q8WWZ7 1642 aa33.15■■■□□ 2.9
C12orf57-203ENST00000538392 ARHGEF11O15085 1522 aa33.12■■■□□ 2.89
C12orf57-203ENST00000538392 CHMP7Q8WUX9 453 aaPredicted RBP33.11■■■□□ 2.89
C12orf57-203ENST00000538392 SYNJ2O15056 1496 aa33.07■■■□□ 2.88
C12orf57-203ENST00000538392 CLASP1Q7Z460 1538 aa32.95■■■□□ 2.87
C12orf57-203ENST00000538392 ADAMTS12P58397 1594 aa32.87■■■□□ 2.85
C12orf57-203ENST00000538392 CYB5RLQ6IPT4 315 aa32.84■■■□□ 2.85
C12orf57-203ENST00000538392 ERICH3Q5RHP9 1530 aa32.82■■■□□ 2.85
C12orf57-203ENST00000538392 ARAP1Q96P48 1450 aa32.82■■■□□ 2.84
C12orf57-203ENST00000538392 GRIN2AQ12879 1464 aa32.81■■■□□ 2.84
C12orf57-203ENST00000538392 FHAD1B1AJZ9 1412 aa32.78■■■□□ 2.84
C12orf57-203ENST00000538392 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
C12orf57-203ENST00000538392 NUP160Q12769 1436 aa32.67■■■□□ 2.82
C12orf57-203ENST00000538392 KIF27Q86VH2 1401 aa32.6■■■□□ 2.81
C12orf57-203ENST00000538392 IGF1RP08069 1367 aa32.49■■■□□ 2.79
C12orf57-203ENST00000538392 ERCC6L2Q5T890 1561 aa32.49■■■□□ 2.79
C12orf57-203ENST00000538392 SHROOM2Q13796 1616 aa32.48■■■□□ 2.79
C12orf57-203ENST00000538392 CUL7Q14999 1698 aa32.46■■■□□ 2.79
C12orf57-203ENST00000538392 RUSC2Q8N2Y8 1516 aa32.4■■■□□ 2.78
C12orf57-203ENST00000538392 TRHP20396 242 aaPredicted RBP32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms