RNA–Protein interactions for RNA: ENST00000380649.7

HADHA-201, Transcript of hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HADHA, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HADHA-201ENST00000380649 NISCHQ9Y2I1 1504 aa22.45■■□□□ 1.18
HADHA-201ENST00000380649 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
HADHA-201ENST00000380649 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
HADHA-201ENST00000380649 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
HADHA-201ENST00000380649 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
HADHA-201ENST00000380649 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
HADHA-201ENST00000380649 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.61
HADHA-201ENST00000380649 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
HADHA-201ENST00000380649 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
HADHA-201ENST00000380649 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
HADHA-201ENST00000380649 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
HADHA-201ENST00000380649 SCRIBQ14160 1630 aa18.02■□□□□ 0.47
HADHA-201ENST00000380649 ABCC9O60706 1549 aa17.96■□□□□ 0.47
HADHA-201ENST00000380649 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
HADHA-201ENST00000380649 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.44
HADHA-201ENST00000380649 LOC105371045A0A1W2PR82 267 aa17.77■□□□□ 0.44
HADHA-201ENST00000380649 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
HADHA-201ENST00000380649 PCGF6Q9BYE7 350 aa17.69■□□□□ 0.42
HADHA-201ENST00000380649 HRCP23327 699 aa17.61■□□□□ 0.41
HADHA-201ENST00000380649 NACADO15069 1562 aa17.61■□□□□ 0.41
HADHA-201ENST00000380649 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
HADHA-201ENST00000380649 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.4
HADHA-201ENST00000380649 WIZO95785 1651 aa17.46■□□□□ 0.39
HADHA-201ENST00000380649 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
HADHA-201ENST00000380649 FAM9AQ8IZU1 332 aaPredicted RBP17.45■□□□□ 0.38
HADHA-201ENST00000380649 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
HADHA-201ENST00000380649 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
HADHA-201ENST00000380649 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
HADHA-201ENST00000380649 UNC13AQ9UPW8 1703 aa17.25■□□□□ 0.35
HADHA-201ENST00000380649 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
HADHA-201ENST00000380649 SLC24A1O60721 1099 aa17.18■□□□□ 0.34
HADHA-201ENST00000380649 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
HADHA-201ENST00000380649 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
HADHA-201ENST00000380649 ABCC8Q09428 1581 aa17.09■□□□□ 0.33
HADHA-201ENST00000380649 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
HADHA-201ENST00000380649 SMARCA2P51531 1590 aa17.04■□□□□ 0.32
HADHA-201ENST00000380649 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
HADHA-201ENST00000380649 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
HADHA-201ENST00000380649 KCNA4P22459 653 aa16.95■□□□□ 0.3
HADHA-201ENST00000380649 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
HADHA-201ENST00000380649 SOGA1O94964 1423 aa16.87■□□□□ 0.29
HADHA-201ENST00000380649 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.28
HADHA-201ENST00000380649 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
HADHA-201ENST00000380649 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
HADHA-201ENST00000380649 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
HADHA-201ENST00000380649 PEG3Q9GZU2 1588 aa16.73■□□□□ 0.27
HADHA-201ENST00000380649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
HADHA-201ENST00000380649 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
HADHA-201ENST00000380649 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
HADHA-201ENST00000380649 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
HADHA-201ENST00000380649 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
HADHA-201ENST00000380649 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
HADHA-201ENST00000380649 TNIKQ9UKE5 1360 aa16.65■□□□□ 0.26
HADHA-201ENST00000380649 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
HADHA-201ENST00000380649 EEA1Q15075 1411 aa16.62■□□□□ 0.25
HADHA-201ENST00000380649 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
HADHA-201ENST00000380649 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
HADHA-201ENST00000380649 ADRA2BP18089 450 aa16.52■□□□□ 0.24
HADHA-201ENST00000380649 RTN4Q9NQC3 1192 aaKnown RBP16.5■□□□□ 0.23
HADHA-201ENST00000380649 KIF21BO75037 1637 aa16.49■□□□□ 0.23
HADHA-201ENST00000380649 CEP164Q9UPV0 1460 aa16.49■□□□□ 0.23
HADHA-201ENST00000380649 RANGAP1P46060 587 aaPredicted RBP16.47■□□□□ 0.23
HADHA-201ENST00000380649 RAPGEF2Q9Y4G8 1499 aa16.46■□□□□ 0.23
HADHA-201ENST00000380649 CLIP1P30622 1438 aa16.42■□□□□ 0.22
HADHA-201ENST00000380649 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
HADHA-201ENST00000380649 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
HADHA-201ENST00000380649 VPS8Q8N3P4 1428 aa16.33■□□□□ 0.21
HADHA-201ENST00000380649 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
HADHA-201ENST00000380649 HMGXB3Q12766 1538 aa16.32■□□□□ 0.2
HADHA-201ENST00000380649 CUX1P39880 1505 aa16.31■□□□□ 0.2
HADHA-201ENST00000380649 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
HADHA-201ENST00000380649 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
HADHA-201ENST00000380649 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
HADHA-201ENST00000380649 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
HADHA-201ENST00000380649 ARAP1Q96P48 1450 aa16.21■□□□□ 0.19
HADHA-201ENST00000380649 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
HADHA-201ENST00000380649 APLP2Q06481 763 aa16.2■□□□□ 0.18
HADHA-201ENST00000380649 CFTRP13569 1480 aa16.19■□□□□ 0.18
HADHA-201ENST00000380649 KIF27Q86VH2 1401 aa16.14■□□□□ 0.17
HADHA-201ENST00000380649 NEUROD1Q13562 356 aa16.12■□□□□ 0.17
HADHA-201ENST00000380649 KANK4Q5T7N3 995 aaPredicted RBP16.12■□□□□ 0.17
HADHA-201ENST00000380649 PRDM2Q13029 1718 aa16.12■□□□□ 0.17
HADHA-201ENST00000380649 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
HADHA-201ENST00000380649 ZNF316A6NFI3 1004 aaPredicted RBP16.08■□□□□ 0.16
HADHA-201ENST00000380649 CUX2O14529 1486 aa16.06■□□□□ 0.16
HADHA-201ENST00000380649 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
HADHA-201ENST00000380649 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
HADHA-201ENST00000380649 FGD5Q6ZNL6 1462 aa16.01■□□□□ 0.15
HADHA-201ENST00000380649 CC2D2AQ9P2K1 1620 aa16.01■□□□□ 0.15
HADHA-201ENST00000380649 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
HADHA-201ENST00000380649 IGF1RP08069 1367 aa15.98■□□□□ 0.15
HADHA-201ENST00000380649 DHX57Q6P158 1386 aaKnown RBP15.96■□□□□ 0.15
HADHA-201ENST00000380649 YTHDC1Q96MU7 727 aaKnown RBP15.96■□□□□ 0.15
HADHA-201ENST00000380649 ITGAEP38570 1179 aa15.93■□□□□ 0.14
HADHA-201ENST00000380649 RRBP1Q9P2E9 1410 aaKnown RBP15.93■□□□□ 0.14
HADHA-201ENST00000380649 MIER1Q8N108 512 aa15.93■□□□□ 0.14
HADHA-201ENST00000380649 GTF3C3Q9Y5Q9 886 aa15.92■□□□□ 0.14
HADHA-201ENST00000380649 CARMIL1Q5VZK9 1371 aa15.91■□□□□ 0.14
HADHA-201ENST00000380649 CENPBP07199 599 aaPredicted RBP15.91■□□□□ 0.14
HADHA-201ENST00000380649 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms