RNA–Protein interactions for RNA: ENST00000391921.8

CD55-206, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best) BASIC

Gene CD55, Length 2,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-206ENST00000391921 NISCHQ9Y2I1 1504 aa39.98■■■■□ 3.99
CD55-206ENST00000391921 CCDC180Q9P1Z9 1646 aa34.21■■■■□ 3.07
CD55-206ENST00000391921 SHROOM4Q9ULL8 1493 aa33.75■■■□□ 2.99
CD55-206ENST00000391921 ZCCHC6Q5VYS8 1495 aaKnown RBP33.71■■■□□ 2.99
CD55-206ENST00000391921 DCAF8L2P0C7V8 631 aa33.39■■■□□ 2.94
CD55-206ENST00000391921 SUPT5HO00267 1087 aaKnown RBP32.83■■■□□ 2.85
CD55-206ENST00000391921 DCAF1Q9Y4B6 1507 aa32.78■■■□□ 2.84
CD55-206ENST00000391921 ABCC9O60706 1549 aa32.23■■■□□ 2.75
CD55-206ENST00000391921 SCRIBQ14160 1630 aa32.03■■■□□ 2.72
CD55-206ENST00000391921 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
CD55-206ENST00000391921 NACADO15069 1562 aa31.78■■■□□ 2.68
CD55-206ENST00000391921 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
CD55-206ENST00000391921 RSF1Q96T23 1441 aaPredicted RBP31.44■■■□□ 2.62
CD55-206ENST00000391921 RB1CC1Q8TDY2 1594 aa31.39■■■□□ 2.61
CD55-206ENST00000391921 CECR2Q9BXF3 1484 aa31.25■■■□□ 2.59
CD55-206ENST00000391921 MROH2BQ7Z745 1585 aa31.07■■■□□ 2.56
CD55-206ENST00000391921 UNC13AQ9UPW8 1703 aa30.88■■■□□ 2.53
CD55-206ENST00000391921 WIZO95785 1651 aa30.86■■■□□ 2.53
CD55-206ENST00000391921 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
CD55-206ENST00000391921 PABPN1Q86U42 306 aaKnown RBP eCLIP30.74■■■□□ 2.51
CD55-206ENST00000391921 LOC105371045A0A1W2PR82 267 aa30.69■■■□□ 2.5
CD55-206ENST00000391921 TRIM41Q8WV44 630 aa30.61■■■□□ 2.49
CD55-206ENST00000391921 SMARCA4P51532 1647 aa30.56■■■□□ 2.48
CD55-206ENST00000391921 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
CD55-206ENST00000391921 FAM9AQ8IZU1 332 aaPredicted RBP30.37■■■□□ 2.45
CD55-206ENST00000391921 TOP2AP11388 1531 aaKnown RBP30.36■■■□□ 2.45
CD55-206ENST00000391921 CCDC88BA6NC98 1476 aa30.24■■■□□ 2.43
CD55-206ENST00000391921 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
CD55-206ENST00000391921 EIF4G1Q04637 1599 aaKnown RBP30.17■■■□□ 2.42
CD55-206ENST00000391921 EHMT2Q96KQ7 1210 aa30.16■■■□□ 2.42
CD55-206ENST00000391921 PCGF6Q9BYE7 350 aa30.1■■■□□ 2.41
CD55-206ENST00000391921 ABCC8Q09428 1581 aa30■■■□□ 2.39
CD55-206ENST00000391921 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
CD55-206ENST00000391921 ATAD2BQ9ULI0 1458 aa29.92■■■□□ 2.38
CD55-206ENST00000391921 BAZ1BQ9UIG0 1483 aaKnown RBP29.82■■■□□ 2.36
CD55-206ENST00000391921 HRCP23327 699 aa29.66■■■□□ 2.34
CD55-206ENST00000391921 TRIM26Q12899 539 aaPredicted RBP29.62■■■□□ 2.33
CD55-206ENST00000391921 SOGA1O94964 1423 aa29.61■■■□□ 2.33
CD55-206ENST00000391921 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
CD55-206ENST00000391921 RUSC2Q8N2Y8 1516 aa29.5■■■□□ 2.31
CD55-206ENST00000391921 SYNJ1O43426 1573 aa29.42■■■□□ 2.3
CD55-206ENST00000391921 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
CD55-206ENST00000391921 CSRNP3Q8WYN3 585 aa29.39■■■□□ 2.29
CD55-206ENST00000391921 PPARGC1BQ86YN6 1023 aaKnown RBP29.37■■■□□ 2.29
CD55-206ENST00000391921 HMGXB3Q12766 1538 aa29.36■■■□□ 2.29
CD55-206ENST00000391921 EEA1Q15075 1411 aa29.32■■■□□ 2.28
CD55-206ENST00000391921 UBTFP17480 764 aaKnown RBP29.25■■■□□ 2.27
CD55-206ENST00000391921 CEP162Q5TB80 1403 aa29.2■■■□□ 2.27
CD55-206ENST00000391921 TNIKQ9UKE5 1360 aa29.17■■■□□ 2.26
CD55-206ENST00000391921 GOLGA3Q08378 1498 aa29.12■■■□□ 2.25
CD55-206ENST00000391921 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
CD55-206ENST00000391921 CFTRP13569 1480 aa29.05■■■□□ 2.24
CD55-206ENST00000391921 TTBK1Q5TCY1 1321 aaPredicted RBP29.04■■■□□ 2.24
CD55-206ENST00000391921 CEP164Q9UPV0 1460 aa29.01■■■□□ 2.24
CD55-206ENST00000391921 CC2D2AQ9P2K1 1620 aa29■■■□□ 2.23
CD55-206ENST00000391921 BIVM-ERCC5R4GMW8 1640 aa28.97■■■□□ 2.23
CD55-206ENST00000391921 CUX1P39880 1505 aa28.96■■■□□ 2.23
CD55-206ENST00000391921 KIF21BO75037 1637 aa28.94■■■□□ 2.22
CD55-206ENST00000391921 RAPGEF2Q9Y4G8 1499 aa28.92■■■□□ 2.22
CD55-206ENST00000391921 RANGAP1P46060 587 aaPredicted RBP28.86■■■□□ 2.21
CD55-206ENST00000391921 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
CD55-206ENST00000391921 CLIP1P30622 1438 aa28.79■■■□□ 2.2
CD55-206ENST00000391921 PRDM2Q13029 1718 aa28.71■■■□□ 2.19
CD55-206ENST00000391921 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
CD55-206ENST00000391921 PRXQ9BXM0 1461 aa28.67■■■□□ 2.18
CD55-206ENST00000391921 ZEB1P37275 1124 aaPredicted RBP28.67■■■□□ 2.18
CD55-206ENST00000391921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
CD55-206ENST00000391921 ERICH3Q5RHP9 1530 aa28.58■■■□□ 2.17
CD55-206ENST00000391921 VPS8Q8N3P4 1428 aa28.57■■■□□ 2.16
CD55-206ENST00000391921 FANCD2Q9BXW9 1451 aa28.57■■■□□ 2.16
CD55-206ENST00000391921 NESP48681 1621 aa28.56■■■□□ 2.16
CD55-206ENST00000391921 CUX2O14529 1486 aa28.55■■■□□ 2.16
CD55-206ENST00000391921 FGD5Q6ZNL6 1462 aa28.54■■■□□ 2.16
CD55-206ENST00000391921 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
CD55-206ENST00000391921 CCER1Q8TC90 406 aaPredicted RBP28.48■■■□□ 2.15
CD55-206ENST00000391921 APLP2Q06481 763 aa28.45■■■□□ 2.14
CD55-206ENST00000391921 IGF1RP08069 1367 aa28.43■■■□□ 2.14
CD55-206ENST00000391921 ARAP1Q96P48 1450 aa28.37■■■□□ 2.13
CD55-206ENST00000391921 RAD54L2Q9Y4B4 1467 aa28.33■■■□□ 2.13
CD55-206ENST00000391921 TOPBP1Q92547 1522 aa28.31■■■□□ 2.12
CD55-206ENST00000391921 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
CD55-206ENST00000391921 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
CD55-206ENST00000391921 POLA1P09884 1462 aaPredicted RBP28.28■■■□□ 2.12
CD55-206ENST00000391921 HNRNPUL2Q1KMD3 747 aaKnown RBP28.27■■■□□ 2.12
CD55-206ENST00000391921 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
CD55-206ENST00000391921 ARHGAP35Q9NRY4 1499 aa28.24■■■□□ 2.11
CD55-206ENST00000391921 KANK4Q5T7N3 995 aaPredicted RBP28.19■■■□□ 2.1
CD55-206ENST00000391921 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
CD55-206ENST00000391921 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
CD55-206ENST00000391921 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
CD55-206ENST00000391921 P3H3Q8IVL6 736 aa28.04■■■□□ 2.08
CD55-206ENST00000391921 TDRD9Q8NDG6 1382 aaKnown RBP28.04■■■□□ 2.08
CD55-206ENST00000391921 KIF21AQ7Z4S6 1674 aa28.02■■■□□ 2.08
CD55-206ENST00000391921 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
CD55-206ENST00000391921 CUL7Q14999 1698 aa27.9■■■□□ 2.06
CD55-206ENST00000391921 GAPVD1Q14C86 1478 aa27.88■■■□□ 2.05
CD55-206ENST00000391921 ATP1B4Q9UN42 357 aaPredicted RBP27.88■■■□□ 2.05
CD55-206ENST00000391921 FHOD3Q2V2M9 1422 aa27.86■■■□□ 2.05
CD55-206ENST00000391921 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
CD55-206ENST00000391921 RRBP1Q9P2E9 1410 aaKnown RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms