Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.923e-7■■■□□ 19.1
MATR3P43243 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.923e-7■■■□□ 19.1
MATR3P43243 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC9.15□□□□□ -0.943e-7■■■□□ 19.1
MATR3P43243 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.993e-7■■■□□ 19.1
MATR3P43243 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.013e-7■■■□□ 19.1
MATR3P43243 ROCK2-201ENST00000261535 1795 ntTSL 524.1■■□□□ 1.455e-7■■■□□ 19.1
MATR3P43243 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.245e-7■■■□□ 19.1
MATR3P43243 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.39■□□□□ 0.855e-7■■■□□ 19.1
MATR3P43243 L3MBTL4-205ENST00000580162 457 ntTSL 318.97■□□□□ 0.636e-7■■■□□ 19.1
MATR3P43243 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC13.92□□□□□ -0.189e-7■■■□□ 19.1
MATR3P43243 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC13.11□□□□□ -0.319e-7■■■□□ 19.1
MATR3P43243 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC11.46□□□□□ -0.589e-7■■■□□ 19.1
MATR3P43243 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC10.15□□□□□ -0.789e-7■■■□□ 19.1
MATR3P43243 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.37□□□□□ -1.399e-7■■■□□ 19.1
MATR3P43243 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.23□□□□□ -1.419e-7■■■□□ 19.1
MATR3P43243 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.99□□□□□ -1.459e-7■■■□□ 19.1
MATR3P43243 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.74□□□□□ -1.499e-7■■■□□ 19.1
MATR3P43243 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.954e-6■■■□□ 19.1
MATR3P43243 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.874e-6■■■□□ 19.1
MATR3P43243 HERPUD2-203ENST00000413517 808 ntTSL 59.3□□□□□ -0.924e-6■■■□□ 19.1
MATR3P43243 HERPUD2-206ENST00000438224 811 ntTSL 39.3□□□□□ -0.924e-6■■■□□ 19.1
MATR3P43243 HERPUD2-204ENST00000426180 757 ntTSL 56.23□□□□□ -1.414e-6■■■□□ 19.1
MATR3P43243 AFDN-209ENST00000400825 963 ntTSL 530.94■■■□□ 2.548e-10■■■□□ 19.1
MATR3P43243 AFDN-208ENST00000400824 875 ntTSL 528.56■■■□□ 2.168e-10■■■□□ 19.1
MATR3P43243 ITPR2-201ENST00000242737 581 ntTSL 1 (best) BASIC12.14□□□□□ -0.471e-7■■■□□ 19.1
MATR3P43243 ITPR2-209ENST00000545235 540 ntTSL 1 (best)8.98□□□□□ -0.971e-7■■■□□ 19.1
MATR3P43243 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.052e-6■■■□□ 19.1
MATR3P43243 EML4-204ENST00000406175 4622 ntTSL 1 (best)6.67□□□□□ -1.342e-11■■■□□ 19.1
MATR3P43243 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC11.83□□□□□ -0.523e-6■■■□□ 19
MATR3P43243 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC10.31□□□□□ -0.763e-6■■■□□ 19
MATR3P43243 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.77□□□□□ -0.853e-6■■■□□ 19
MATR3P43243 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.943e-6■■■□□ 19
MATR3P43243 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.6□□□□□ -1.193e-6■■■□□ 19
MATR3P43243 CUX1-218ENST00000560541 3176 ntTSL 512.59□□□□□ -0.398e-13■■■□□ 19
MATR3P43243 CUX1-217ENST00000558836 2965 ntTSL 511.66□□□□□ -0.548e-13■■■□□ 19
MATR3P43243 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.97■□□□□ 0.632e-6■■■□□ 19
MATR3P43243 FOXP1-219ENST00000610810 577 ntTSL 516.2■□□□□ 0.182e-6■■■□□ 19
MATR3P43243 LINC01572-206ENST00000624829 1666 ntTSL 5 BASIC10.98□□□□□ -0.652e-6■■■□□ 19
MATR3P43243 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.141e-6■■■□□ 19
MATR3P43243 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.611e-6■■■□□ 19
MATR3P43243 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.98■□□□□ 0.471e-6■■■□□ 19
MATR3P43243 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.175e-7■■■□□ 19
MATR3P43243 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.65e-7■■■□□ 19
MATR3P43243 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.91□□□□□ -1.145e-7■■■□□ 19
MATR3P43243 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.55e-7■■■□□ 19
MATR3P43243 ATXN10-210ENST00000493643 617 ntTSL 55.35□□□□□ -1.552e-6■■■□□ 19
MATR3P43243 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC11.75□□□□□ -0.535e-7■■■□□ 19
MATR3P43243 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC9.12□□□□□ -0.955e-7■■■□□ 19
MATR3P43243 CNOT2-207ENST00000547867 571 ntTSL 49.71□□□□□ -0.864e-7■■■□□ 19
MATR3P43243 CNOT2-212ENST00000548599 643 ntTSL 57.06□□□□□ -1.284e-7■■■□□ 19
MATR3P43243 CNOT2-234ENST00000551873 677 ntTSL 56.47□□□□□ -1.374e-7■■■□□ 19
MATR3P43243 CNOT2-224ENST00000550194 747 ntTSL 56.47□□□□□ -1.374e-7■■■□□ 19
MATR3P43243 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.069e-7■■■□□ 19
MATR3P43243 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.67■□□□□ 0.589e-7■■■□□ 19
MATR3P43243 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.09■□□□□ 0.493e-8■■■□□ 19
MATR3P43243 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.04■□□□□ 0.483e-8■■■□□ 19
MATR3P43243 CCDC90B-201ENST00000260054 1688 ntTSL 217.27■□□□□ 0.363e-8■■■□□ 19
MATR3P43243 CCDC90B-215ENST00000529745 1053 ntTSL 316.83■□□□□ 0.283e-8■■■□□ 19
MATR3P43243 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.71■□□□□ 0.273e-8■■■□□ 19
MATR3P43243 CCDC90B-216ENST00000529856 1039 ntTSL 313.86□□□□□ -0.193e-8■■■□□ 19
MATR3P43243 CCDC90B-210ENST00000528149 987 ntTSL 312.61□□□□□ -0.393e-8■■■□□ 19
MATR3P43243 CCDC90B-211ENST00000529073 719 ntTSL 5 BASIC12.48□□□□□ -0.413e-8■■■□□ 19
MATR3P43243 CCDC90B-218ENST00000533761 1587 ntTSL 511.89□□□□□ -0.513e-8■■■□□ 19
MATR3P43243 CCDC90B-214ENST00000529689 4014 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.593e-8■■■□□ 19
MATR3P43243 CCDC90B-219ENST00000534753 723 ntTSL 59.82□□□□□ -0.843e-8■■■□□ 19
MATR3P43243 CCDC90B-208ENST00000527025 777 ntTSL 59.65□□□□□ -0.863e-8■■■□□ 19
MATR3P43243 CCDC90B-212ENST00000529312 773 ntTSL 58.57□□□□□ -1.043e-8■■■□□ 19
MATR3P43243 CCDC90B-209ENST00000527495 612 ntTSL 53.84□□□□□ -1.793e-8■■■□□ 19
MATR3P43243 PTK2-254ENST00000524040 475 ntTSL 220.04■□□□□ 0.87e-7■■■□□ 19
MATR3P43243 PTK2-231ENST00000521332 630 ntTSL 420.04■□□□□ 0.87e-7■■■□□ 19
MATR3P43243 FOXN3-210ENST00000555658 648 ntTSL 34.42□□□□□ -1.73e-7■■■□□ 19
MATR3P43243 TEAD1-204ENST00000527376 477 ntTSL 323.68■■□□□ 1.383e-6■■■□□ 19
MATR3P43243 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.433e-6■■■□□ 19
MATR3P43243 FLOT2-208ENST00000582174 703 ntTSL 321.8■■□□□ 1.085e-9■■■□□ 19
MATR3P43243 FLOT2-212ENST00000593158 752 ntTSL 520.57■□□□□ 0.885e-9■■■□□ 19
MATR3P43243 FLOT2-207ENST00000581509 426 ntTSL 219.44■□□□□ 0.75e-9■■■□□ 19
MATR3P43243 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.685e-9■■■□□ 19
MATR3P43243 FLOT2-206ENST00000580805 2679 ntTSL 518.03■□□□□ 0.485e-9■■■□□ 19
MATR3P43243 FLOT2-204ENST00000577789 2503 ntTSL 517.92■□□□□ 0.465e-9■■■□□ 19
MATR3P43243 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.1■□□□□ 0.335e-9■■■□□ 19
MATR3P43243 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.165e-9■■■□□ 19
MATR3P43243 FLOT2-211ENST00000586827 1069 ntTSL 512.87□□□□□ -0.355e-9■■■□□ 19
MATR3P43243 ZEB1-214ENST00000558863 1355 ntTSL 526.68■■□□□ 1.863e-6■■■□□ 19
MATR3P43243 ZEB1-206ENST00000488625 6026 ntTSL 1 (best)11.16□□□□□ -0.623e-6■■■□□ 19
MATR3P43243 ZEB1-223ENST00000561304 1383 ntTSL 1 (best)8.07□□□□□ -1.123e-6■■■□□ 19
MATR3P43243 ZEB1-203ENST00000424869 887 ntTSL 58.05□□□□□ -1.123e-6■■■□□ 19
MATR3P43243 ZEB1-222ENST00000561212 1500 ntTSL 57.94□□□□□ -1.143e-6■■■□□ 19
MATR3P43243 ZEB1-204ENST00000437844 6246 ntTSL 1 (best)7.66□□□□□ -1.183e-6■■■□□ 19
MATR3P43243 ZEB1-216ENST00000559496 1381 ntTSL 1 (best)7.45□□□□□ -1.223e-6■■■□□ 19
MATR3P43243 ZEB1-217ENST00000559858 2745 ntTSL 1 (best)7.4□□□□□ -1.233e-6■■■□□ 19
MATR3P43243 ZEB1-221ENST00000561061 970 ntTSL 1 (best)7.2□□□□□ -1.263e-6■■■□□ 19
MATR3P43243 ZEB1-210ENST00000557827 877 ntTSL 1 (best)7.04□□□□□ -1.283e-6■■■□□ 19
MATR3P43243 ZEB1-211ENST00000558440 886 ntTSL 1 (best)6.5□□□□□ -1.373e-6■■■□□ 19
MATR3P43243 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.373e-6■■■□□ 19
MATR3P43243 ZEB1-215ENST00000559476 1205 ntTSL 26.35□□□□□ -1.393e-6■■■□□ 19
MATR3P43243 ZEB1-209ENST00000542879 3645 ntTSL 26.2□□□□□ -1.423e-6■■■□□ 19
MATR3P43243 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.473e-6■■■□□ 19
MATR3P43243 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.513e-6■■■□□ 19
MATR3P43243 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.523e-6■■■□□ 19
MATR3P43243 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.523e-6■■■□□ 19
Retrieved 100 of 16,209 protein–RNA pairs in 113.2 ms