RNA–Protein interactions for RNA: ENST00000527495.5

CCDC90B-209, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-209ENST00000527495 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
CCDC90B-209ENST00000527495 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
CCDC90B-209ENST00000527495 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
CCDC90B-209ENST00000527495 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
CCDC90B-209ENST00000527495 FOXD1Q16676 465 aa16.92■□□□□ 0.3
CCDC90B-209ENST00000527495 PLPPR3Q6T4P5 718 aa16.45■□□□□ 0.22
CCDC90B-209ENST00000527495 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
CCDC90B-209ENST00000527495 ADRA2BP18089 450 aa16.01■□□□□ 0.15
CCDC90B-209ENST00000527495 PIAS4Q8N2W9 510 aaPredicted RBP15.78■□□□□ 0.12
CCDC90B-209ENST00000527495 MSH5O43196 834 aa15.56■□□□□ 0.08
CCDC90B-209ENST00000527495 POTEDQ86YR6 584 aa14.84□□□□□ -0.03
CCDC90B-209ENST00000527495 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
CCDC90B-209ENST00000527495 PPP4R3CPQ6ZMV5 832 aa14.51□□□□□ -0.09
CCDC90B-209ENST00000527495 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
CCDC90B-209ENST00000527495 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
CCDC90B-209ENST00000527495 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
CCDC90B-209ENST00000527495 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
CCDC90B-209ENST00000527495 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-209ENST00000527495 KCNA4P22459 653 aa13.9□□□□□ -0.18
CCDC90B-209ENST00000527495 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
CCDC90B-209ENST00000527495 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-209ENST00000527495 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
CCDC90B-209ENST00000527495 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
CCDC90B-209ENST00000527495 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
CCDC90B-209ENST00000527495 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
CCDC90B-209ENST00000527495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCDC90B-209ENST00000527495 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-209ENST00000527495 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-209ENST00000527495 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-209ENST00000527495 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-209ENST00000527495 ZBTB22O15209 634 aa12.87□□□□□ -0.35
CCDC90B-209ENST00000527495 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-209ENST00000527495 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
CCDC90B-209ENST00000527495 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
CCDC90B-209ENST00000527495 CAPN15O75808 1086 aa12.69□□□□□ -0.38
CCDC90B-209ENST00000527495 DSG3P32926 999 aa12.66□□□□□ -0.38
CCDC90B-209ENST00000527495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-209ENST00000527495 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-209ENST00000527495 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-209ENST00000527495 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-209ENST00000527495 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-209ENST00000527495 APLP2Q06481 763 aa12.53□□□□□ -0.4
CCDC90B-209ENST00000527495 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
CCDC90B-209ENST00000527495 ABCB7O75027 752 aa12.49□□□□□ -0.41
CCDC90B-209ENST00000527495 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
CCDC90B-209ENST00000527495 EHMT2Q96KQ7 1210 aa12.37□□□□□ -0.43
CCDC90B-209ENST00000527495 POLA2Q14181 598 aa12.34□□□□□ -0.43
CCDC90B-209ENST00000527495 ATXN8OSP0DMR3 200 aa12.33□□□□□ -0.44
CCDC90B-209ENST00000527495 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-209ENST00000527495 ZBTB12Q9Y330 459 aaPredicted RBP12□□□□□ -0.49
CCDC90B-209ENST00000527495 OSCARQ8IYS5 282 aa11.96□□□□□ -0.49
CCDC90B-209ENST00000527495 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-209ENST00000527495 FBLN2P98095 1184 aa11.83□□□□□ -0.52
CCDC90B-209ENST00000527495 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
CCDC90B-209ENST00000527495 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
CCDC90B-209ENST00000527495 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
CCDC90B-209ENST00000527495 SPDYE2Q495Y8 402 aa11.72□□□□□ -0.53
CCDC90B-209ENST00000527495 REM2Q8IYK8 340 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-209ENST00000527495 SSUH2Q9Y2M2 353 aa11.69□□□□□ -0.54
CCDC90B-209ENST00000527495 POTEHQ6S545 545 aa11.65□□□□□ -0.54
CCDC90B-209ENST00000527495 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
CCDC90B-209ENST00000527495 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
CCDC90B-209ENST00000527495 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
CCDC90B-209ENST00000527495 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC90B-209ENST00000527495 PIP4P2Q8N4L2 257 aa11.47□□□□□ -0.57
CCDC90B-209ENST00000527495 SPDYE4A6NLX3 237 aa11.46□□□□□ -0.57
CCDC90B-209ENST00000527495 FXR2P51116 673 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC90B-209ENST00000527495 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-209ENST00000527495 CLEC11AQ9Y240 323 aa11.39□□□□□ -0.59
CCDC90B-209ENST00000527495 PROM2Q8N271 834 aa11.35□□□□□ -0.59
CCDC90B-209ENST00000527495 PRKAR2AP13861 404 aaKnown RBP11.25□□□□□ -0.61
CCDC90B-209ENST00000527495 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
CCDC90B-209ENST00000527495 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
CCDC90B-209ENST00000527495 FKBP8Q14318 412 aa11.2□□□□□ -0.62
CCDC90B-209ENST00000527495 EVX2Q03828 476 aa11.17□□□□□ -0.62
CCDC90B-209ENST00000527495 CREBZFQ9NS37 354 aa11.15□□□□□ -0.62
CCDC90B-209ENST00000527495 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
CCDC90B-209ENST00000527495 C19orf67A6NJJ6 358 aa11.07□□□□□ -0.64
CCDC90B-209ENST00000527495 HAX1O00165 279 aa11.07□□□□□ -0.64
CCDC90B-209ENST00000527495 FARP1Q9Y4F1 1045 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-209ENST00000527495 MNX1P50219 401 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-209ENST00000527495 SP7Q8TDD2 431 aaPredicted RBP11.02□□□□□ -0.65
CCDC90B-209ENST00000527495 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
CCDC90B-209ENST00000527495 MIER1Q8N108 512 aa10.84□□□□□ -0.67
CCDC90B-209ENST00000527495 GABBR2O75899 941 aa10.81□□□□□ -0.68
CCDC90B-209ENST00000527495 ZRANB1Q9UGI0 708 aa10.79□□□□□ -0.68
CCDC90B-209ENST00000527495 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
CCDC90B-209ENST00000527495 NPM1P06748 294 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCDC90B-209ENST00000527495 RASEFQ8IZ41 740 aa10.76□□□□□ -0.69
CCDC90B-209ENST00000527495 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
CCDC90B-209ENST00000527495 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
CCDC90B-209ENST00000527495 PLCD3Q8N3E9 789 aa10.75□□□□□ -0.69
CCDC90B-209ENST00000527495 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
CCDC90B-209ENST00000527495 NUBP1P53384 320 aa10.73□□□□□ -0.69
CCDC90B-209ENST00000527495 POTEIP0CG38 1075 aa10.7□□□□□ -0.7
CCDC90B-209ENST00000527495 CCDC61Q9Y6R9 512 aa10.7□□□□□ -0.7
CCDC90B-209ENST00000527495 GALR2O43603 387 aaPredicted RBP10.68□□□□□ -0.7
CCDC90B-209ENST00000527495 TSPYL2Q9H2G4 693 aaPredicted RBP10.68□□□□□ -0.7
CCDC90B-209ENST00000527495 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
CCDC90B-209ENST00000527495 IFNLR1Q8IU57 520 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms