RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 AEBP2Q6ZN18 517 aaPredicted RBP21.84■■□□□ 1.09
FOXN3-210ENST00000555658 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
FOXN3-210ENST00000555658 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
FOXN3-210ENST00000555658 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
FOXN3-210ENST00000555658 FOXD1Q16676 465 aa17.39■□□□□ 0.37
FOXN3-210ENST00000555658 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
FOXN3-210ENST00000555658 PIAS4Q8N2W9 510 aaPredicted RBP16.37■□□□□ 0.21
FOXN3-210ENST00000555658 MSH5O43196 834 aa16.35■□□□□ 0.21
FOXN3-210ENST00000555658 ADRA2BP18089 450 aa16.3■□□□□ 0.2
FOXN3-210ENST00000555658 PPP6R1Q9UPN7 881 aa16.28■□□□□ 0.2
FOXN3-210ENST00000555658 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
FOXN3-210ENST00000555658 SCAF1Q9H7N4 1312 aaKnown RBP15.09■□□□□ 0.01
FOXN3-210ENST00000555658 MAPK8IP2Q13387 824 aaPredicted RBP14.91□□□□□ -0.02
FOXN3-210ENST00000555658 DMRT2Q9Y5R5 561 aa14.85□□□□□ -0.03
FOXN3-210ENST00000555658 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
FOXN3-210ENST00000555658 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
FOXN3-210ENST00000555658 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
FOXN3-210ENST00000555658 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
FOXN3-210ENST00000555658 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
FOXN3-210ENST00000555658 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
FOXN3-210ENST00000555658 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
FOXN3-210ENST00000555658 NPM3O75607 178 aaKnown RBP13.96□□□□□ -0.17
FOXN3-210ENST00000555658 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
FOXN3-210ENST00000555658 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
FOXN3-210ENST00000555658 KCNA4P22459 653 aa13.77□□□□□ -0.21
FOXN3-210ENST00000555658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.21
FOXN3-210ENST00000555658 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
FOXN3-210ENST00000555658 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
FOXN3-210ENST00000555658 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
FOXN3-210ENST00000555658 CAPN15O75808 1086 aa13.24□□□□□ -0.29
FOXN3-210ENST00000555658 APLP2Q06481 763 aa13.22□□□□□ -0.29
FOXN3-210ENST00000555658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-210ENST00000555658 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
FOXN3-210ENST00000555658 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
FOXN3-210ENST00000555658 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
FOXN3-210ENST00000555658 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
FOXN3-210ENST00000555658 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
FOXN3-210ENST00000555658 DSG3P32926 999 aa13.03□□□□□ -0.32
FOXN3-210ENST00000555658 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
FOXN3-210ENST00000555658 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-210ENST00000555658 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
FOXN3-210ENST00000555658 ABCB7O75027 752 aa12.88□□□□□ -0.35
FOXN3-210ENST00000555658 POLA2Q14181 598 aa12.68□□□□□ -0.38
FOXN3-210ENST00000555658 ZBTB22O15209 634 aa12.59□□□□□ -0.39
FOXN3-210ENST00000555658 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
FOXN3-210ENST00000555658 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
FOXN3-210ENST00000555658 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
FOXN3-210ENST00000555658 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
FOXN3-210ENST00000555658 POTEHQ6S545 545 aa12.35□□□□□ -0.43
FOXN3-210ENST00000555658 FBLN2P98095 1184 aa12.26□□□□□ -0.45
FOXN3-210ENST00000555658 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
FOXN3-210ENST00000555658 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
FOXN3-210ENST00000555658 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
FOXN3-210ENST00000555658 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
FOXN3-210ENST00000555658 EHMT2Q96KQ7 1210 aa12.15□□□□□ -0.46
FOXN3-210ENST00000555658 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
FOXN3-210ENST00000555658 SPDYE2BA6NHP3 402 aa12.07□□□□□ -0.48
FOXN3-210ENST00000555658 SPDYE6P0CI01 402 aa12.07□□□□□ -0.48
FOXN3-210ENST00000555658 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
FOXN3-210ENST00000555658 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
FOXN3-210ENST00000555658 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
FOXN3-210ENST00000555658 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
FOXN3-210ENST00000555658 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
FOXN3-210ENST00000555658 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
FOXN3-210ENST00000555658 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
FOXN3-210ENST00000555658 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
FOXN3-210ENST00000555658 FXR2P51116 673 aaKnown RBP eCLIP11.8□□□□□ -0.52
FOXN3-210ENST00000555658 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
FOXN3-210ENST00000555658 HAX1O00165 279 aa11.72□□□□□ -0.53
FOXN3-210ENST00000555658 PRKAR2AP13861 404 aaKnown RBP11.68□□□□□ -0.54
FOXN3-210ENST00000555658 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
FOXN3-210ENST00000555658 SP7Q8TDD2 431 aaPredicted RBP11.64□□□□□ -0.55
FOXN3-210ENST00000555658 SPDYE4A6NLX3 237 aa11.59□□□□□ -0.55
FOXN3-210ENST00000555658 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
FOXN3-210ENST00000555658 CHADLQ6NUI6 762 aa11.52□□□□□ -0.57
FOXN3-210ENST00000555658 C19orf67A6NJJ6 358 aa11.43□□□□□ -0.58
FOXN3-210ENST00000555658 EVX2Q03828 476 aa11.41□□□□□ -0.58
FOXN3-210ENST00000555658 FARP1Q9Y4F1 1045 aaPredicted RBP11.4□□□□□ -0.58
FOXN3-210ENST00000555658 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
FOXN3-210ENST00000555658 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
FOXN3-210ENST00000555658 GABBR2O75899 941 aa11.25□□□□□ -0.61
FOXN3-210ENST00000555658 NPM1P06748 294 aaKnown RBP eCLIP11.24□□□□□ -0.61
FOXN3-210ENST00000555658 PAK3O75914 559 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-210ENST00000555658 CLCN6P51797 869 aa11.21□□□□□ -0.61
FOXN3-210ENST00000555658 PROM2Q8N271 834 aa11.2□□□□□ -0.62
FOXN3-210ENST00000555658 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
FOXN3-210ENST00000555658 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
FOXN3-210ENST00000555658 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
FOXN3-210ENST00000555658 FKBP8Q14318 412 aa11.11□□□□□ -0.63
FOXN3-210ENST00000555658 MIER1Q8N108 512 aa11.1□□□□□ -0.63
FOXN3-210ENST00000555658 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
FOXN3-210ENST00000555658 MNX1P50219 401 aaPredicted RBP11.06□□□□□ -0.64
FOXN3-210ENST00000555658 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
FOXN3-210ENST00000555658 PHF12Q96QT6 1004 aa11□□□□□ -0.65
FOXN3-210ENST00000555658 TSPYL2Q9H2G4 693 aaPredicted RBP10.98□□□□□ -0.65
FOXN3-210ENST00000555658 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
FOXN3-210ENST00000555658 GALR2O43603 387 aaPredicted RBP10.95□□□□□ -0.66
FOXN3-210ENST00000555658 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
FOXN3-210ENST00000555658 LHX8Q68G74 356 aa10.93□□□□□ -0.66
FOXN3-210ENST00000555658 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms