RNA–Protein interactions for RNA: ENST00000394906.6

FLOT2-201, Transcript of flotillin 2, humanhuman

TSL 5 BASIC

Gene FLOT2, Length 2,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT2-201ENST00000394906 NISCHQ9Y2I1 1504 aa33.25■■■□□ 2.91
FLOT2-201ENST00000394906 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
FLOT2-201ENST00000394906 CCDC180Q9P1Z9 1646 aa28.34■■■□□ 2.13
FLOT2-201ENST00000394906 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
FLOT2-201ENST00000394906 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.07
FLOT2-201ENST00000394906 SUPT5HO00267 1087 aaKnown RBP27.63■■■□□ 2.01
FLOT2-201ENST00000394906 DCAF1Q9Y4B6 1507 aa27.09■■□□□ 1.93
FLOT2-201ENST00000394906 ABCC9O60706 1549 aa26.99■■□□□ 1.91
FLOT2-201ENST00000394906 SCRIBQ14160 1630 aa26.78■■□□□ 1.88
FLOT2-201ENST00000394906 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
FLOT2-201ENST00000394906 MYO15BQ96JP2 1530 aa26.42■■□□□ 1.82
FLOT2-201ENST00000394906 NACADO15069 1562 aa26.35■■□□□ 1.81
FLOT2-201ENST00000394906 RSF1Q96T23 1441 aaPredicted RBP26.2■■□□□ 1.79
FLOT2-201ENST00000394906 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
FLOT2-201ENST00000394906 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
FLOT2-201ENST00000394906 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
FLOT2-201ENST00000394906 LOC105371045A0A1W2PR82 267 aa25.84■■□□□ 1.73
FLOT2-201ENST00000394906 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.72
FLOT2-201ENST00000394906 WIZO95785 1651 aa25.8■■□□□ 1.72
FLOT2-201ENST00000394906 UNC13AQ9UPW8 1703 aa25.75■■□□□ 1.71
FLOT2-201ENST00000394906 TRIM41Q8WV44 630 aa25.64■■□□□ 1.7
FLOT2-201ENST00000394906 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
FLOT2-201ENST00000394906 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
FLOT2-201ENST00000394906 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
FLOT2-201ENST00000394906 BICRAQ9NZM4 1560 aa25.43■■□□□ 1.66
FLOT2-201ENST00000394906 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
FLOT2-201ENST00000394906 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
FLOT2-201ENST00000394906 TOP2AP11388 1531 aaKnown RBP25.24■■□□□ 1.63
FLOT2-201ENST00000394906 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
FLOT2-201ENST00000394906 SMARCA2P51531 1590 aa25.14■■□□□ 1.62
FLOT2-201ENST00000394906 ABCC8Q09428 1581 aa25.12■■□□□ 1.61
FLOT2-201ENST00000394906 EIF4G1Q04637 1599 aaKnown RBP25.08■■□□□ 1.61
FLOT2-201ENST00000394906 ATAD2BQ9ULI0 1458 aa24.9■■□□□ 1.58
FLOT2-201ENST00000394906 PPARGC1BQ86YN6 1023 aaKnown RBP24.86■■□□□ 1.57
FLOT2-201ENST00000394906 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
FLOT2-201ENST00000394906 HRCP23327 699 aa24.84■■□□□ 1.57
FLOT2-201ENST00000394906 PEG3Q9GZU2 1588 aa24.82■■□□□ 1.56
FLOT2-201ENST00000394906 SOGA1O94964 1423 aa24.78■■□□□ 1.56
FLOT2-201ENST00000394906 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.56
FLOT2-201ENST00000394906 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
FLOT2-201ENST00000394906 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.54
FLOT2-201ENST00000394906 TTBK1Q5TCY1 1321 aaPredicted RBP24.6■■□□□ 1.53
FLOT2-201ENST00000394906 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
FLOT2-201ENST00000394906 UBTFP17480 764 aaKnown RBP24.54■■□□□ 1.52
FLOT2-201ENST00000394906 CSRNP3Q8WYN3 585 aa24.54■■□□□ 1.52
FLOT2-201ENST00000394906 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
FLOT2-201ENST00000394906 RANGAP1P46060 587 aaPredicted RBP24.42■■□□□ 1.5
FLOT2-201ENST00000394906 CEP162Q5TB80 1403 aa24.39■■□□□ 1.5
FLOT2-201ENST00000394906 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
FLOT2-201ENST00000394906 EEA1Q15075 1411 aa24.31■■□□□ 1.48
FLOT2-201ENST00000394906 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
FLOT2-201ENST00000394906 GOLGA3Q08378 1498 aa24.25■■□□□ 1.47
FLOT2-201ENST00000394906 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
FLOT2-201ENST00000394906 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
FLOT2-201ENST00000394906 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
FLOT2-201ENST00000394906 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.46
FLOT2-201ENST00000394906 CUX1P39880 1505 aa24.14■■□□□ 1.46
FLOT2-201ENST00000394906 CFTRP13569 1480 aa24.14■■□□□ 1.45
FLOT2-201ENST00000394906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.08■■□□□ 1.45
FLOT2-201ENST00000394906 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.44
FLOT2-201ENST00000394906 KIF21BO75037 1637 aa24.05■■□□□ 1.44
FLOT2-201ENST00000394906 CLIP1P30622 1438 aa24.03■■□□□ 1.44
FLOT2-201ENST00000394906 CADPSQ9ULU8 1353 aa24■■□□□ 1.43
FLOT2-201ENST00000394906 DNAJC5BQ9UF47 199 aa23.97■■□□□ 1.43
FLOT2-201ENST00000394906 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
FLOT2-201ENST00000394906 NESP48681 1621 aa23.91■■□□□ 1.42
FLOT2-201ENST00000394906 KIF27Q86VH2 1401 aa23.89■■□□□ 1.41
FLOT2-201ENST00000394906 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
FLOT2-201ENST00000394906 PRXQ9BXM0 1461 aa23.85■■□□□ 1.41
FLOT2-201ENST00000394906 CUX2O14529 1486 aa23.84■■□□□ 1.41
FLOT2-201ENST00000394906 PRDM2Q13029 1718 aa23.83■■□□□ 1.41
FLOT2-201ENST00000394906 APLP2Q06481 763 aa23.81■■□□□ 1.4
FLOT2-201ENST00000394906 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
FLOT2-201ENST00000394906 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
FLOT2-201ENST00000394906 VPS8Q8N3P4 1428 aa23.8■■□□□ 1.4
FLOT2-201ENST00000394906 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
FLOT2-201ENST00000394906 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
FLOT2-201ENST00000394906 RAD54L2Q9Y4B4 1467 aa23.71■■□□□ 1.39
FLOT2-201ENST00000394906 IGF1RP08069 1367 aa23.71■■□□□ 1.39
FLOT2-201ENST00000394906 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
FLOT2-201ENST00000394906 KANK4Q5T7N3 995 aaPredicted RBP23.63■■□□□ 1.37
FLOT2-201ENST00000394906 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
FLOT2-201ENST00000394906 P3H3Q8IVL6 736 aa23.61■■□□□ 1.37
FLOT2-201ENST00000394906 TOPBP1Q92547 1522 aa23.58■■□□□ 1.37
FLOT2-201ENST00000394906 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
FLOT2-201ENST00000394906 ARHGAP35Q9NRY4 1499 aa23.55■■□□□ 1.36
FLOT2-201ENST00000394906 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
FLOT2-201ENST00000394906 URB2Q14146 1524 aaKnown RBP23.5■■□□□ 1.35
FLOT2-201ENST00000394906 ATP1B4Q9UN42 357 aaPredicted RBP23.5■■□□□ 1.35
FLOT2-201ENST00000394906 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
FLOT2-201ENST00000394906 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
FLOT2-201ENST00000394906 ITGAEP38570 1179 aa23.43■■□□□ 1.34
FLOT2-201ENST00000394906 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
FLOT2-201ENST00000394906 KIF21AQ7Z4S6 1674 aa23.39■■□□□ 1.34
FLOT2-201ENST00000394906 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
FLOT2-201ENST00000394906 FHOD3Q2V2M9 1422 aa23.31■■□□□ 1.32
FLOT2-201ENST00000394906 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
FLOT2-201ENST00000394906 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
FLOT2-201ENST00000394906 PCF11O94913 1555 aaKnown RBP23.18■■□□□ 1.3
FLOT2-201ENST00000394906 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.39e-7■■■■□ 23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms