RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
ZEB1-221ENST00000561061 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
ZEB1-221ENST00000561061 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
ZEB1-221ENST00000561061 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
ZEB1-221ENST00000561061 NISCHQ9Y2I1 1504 aa17.18■□□□□ 0.34
ZEB1-221ENST00000561061 FOXD1Q16676 465 aa16.44■□□□□ 0.22
ZEB1-221ENST00000561061 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
ZEB1-221ENST00000561061 ABCC9O60706 1549 aa15.68■□□□□ 0.1
ZEB1-221ENST00000561061 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
ZEB1-221ENST00000561061 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
ZEB1-221ENST00000561061 ADRA2BP18089 450 aa15.63■□□□□ 0.09
ZEB1-221ENST00000561061 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
ZEB1-221ENST00000561061 MSH5O43196 834 aa15.19■□□□□ 0.02
ZEB1-221ENST00000561061 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
ZEB1-221ENST00000561061 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
ZEB1-221ENST00000561061 UNC13AQ9UPW8 1703 aa14.78□□□□□ -0.04
ZEB1-221ENST00000561061 NACADO15069 1562 aa14.73□□□□□ -0.05
ZEB1-221ENST00000561061 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
ZEB1-221ENST00000561061 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
ZEB1-221ENST00000561061 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
ZEB1-221ENST00000561061 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.1
ZEB1-221ENST00000561061 DCAF8L2P0C7V8 631 aa14.41□□□□□ -0.1
ZEB1-221ENST00000561061 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
ZEB1-221ENST00000561061 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
ZEB1-221ENST00000561061 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
ZEB1-221ENST00000561061 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
ZEB1-221ENST00000561061 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
ZEB1-221ENST00000561061 DCAF1Q9Y4B6 1507 aa14.2□□□□□ -0.14
ZEB1-221ENST00000561061 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
ZEB1-221ENST00000561061 SCRIBQ14160 1630 aa14.18□□□□□ -0.14
ZEB1-221ENST00000561061 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
ZEB1-221ENST00000561061 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
ZEB1-221ENST00000561061 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
ZEB1-221ENST00000561061 CNKSR2Q8WXI2 1034 aa13.86□□□□□ -0.19
ZEB1-221ENST00000561061 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
ZEB1-221ENST00000561061 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
ZEB1-221ENST00000561061 KCNA4P22459 653 aa13.67□□□□□ -0.22
ZEB1-221ENST00000561061 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
ZEB1-221ENST00000561061 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
ZEB1-221ENST00000561061 CUX2O14529 1486 aa13.62□□□□□ -0.23
ZEB1-221ENST00000561061 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
ZEB1-221ENST00000561061 NCAPD3P42695 1498 aa13.54□□□□□ -0.24
ZEB1-221ENST00000561061 ERCC6Q03468 1493 aa13.54□□□□□ -0.24
ZEB1-221ENST00000561061 SMARCA4P51532 1647 aa13.52□□□□□ -0.25
ZEB1-221ENST00000561061 HMGXB3Q12766 1538 aa13.51□□□□□ -0.25
ZEB1-221ENST00000561061 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
ZEB1-221ENST00000561061 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
ZEB1-221ENST00000561061 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
ZEB1-221ENST00000561061 THOC2Q8NI27 1593 aaKnown RBP13.44□□□□□ -0.26
ZEB1-221ENST00000561061 NESP48681 1621 aa13.43□□□□□ -0.26
ZEB1-221ENST00000561061 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
ZEB1-221ENST00000561061 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
ZEB1-221ENST00000561061 BAZ1AQ9NRL2 1556 aaPredicted RBP13.37□□□□□ -0.27
ZEB1-221ENST00000561061 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
ZEB1-221ENST00000561061 LAMC3Q9Y6N6 1575 aa13.35□□□□□ -0.27
ZEB1-221ENST00000561061 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
ZEB1-221ENST00000561061 PDS5BQ9NTI5 1447 aa13.18□□□□□ -0.3
ZEB1-221ENST00000561061 WDR62O43379 1518 aa13.14□□□□□ -0.31
ZEB1-221ENST00000561061 WIZO95785 1651 aa13.14□□□□□ -0.31
ZEB1-221ENST00000561061 MRC2Q9UBG0 1479 aa13.13□□□□□ -0.31
ZEB1-221ENST00000561061 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.31
ZEB1-221ENST00000561061 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
ZEB1-221ENST00000561061 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
ZEB1-221ENST00000561061 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
ZEB1-221ENST00000561061 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
ZEB1-221ENST00000561061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
ZEB1-221ENST00000561061 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
ZEB1-221ENST00000561061 CFTRP13569 1480 aa12.94□□□□□ -0.34
ZEB1-221ENST00000561061 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
ZEB1-221ENST00000561061 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
ZEB1-221ENST00000561061 TOP2AP11388 1531 aaKnown RBP12.93□□□□□ -0.34
ZEB1-221ENST00000561061 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
ZEB1-221ENST00000561061 RIMBP3CA6NJZ7 1639 aa12.89□□□□□ -0.35
ZEB1-221ENST00000561061 RIMBP3BA6NNM3 1639 aa12.89□□□□□ -0.35
ZEB1-221ENST00000561061 RIMBP3Q9UFD9 1639 aa12.89□□□□□ -0.35
ZEB1-221ENST00000561061 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
ZEB1-221ENST00000561061 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
ZEB1-221ENST00000561061 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
ZEB1-221ENST00000561061 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
ZEB1-221ENST00000561061 CHD1O14646 1710 aa12.82□□□□□ -0.36
ZEB1-221ENST00000561061 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
ZEB1-221ENST00000561061 EIF4G3O43432 1585 aaKnown RBP12.79□□□□□ -0.36
ZEB1-221ENST00000561061 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
ZEB1-221ENST00000561061 IFT140Q96RY7 1462 aa12.77□□□□□ -0.37
ZEB1-221ENST00000561061 ARHGEF11O15085 1522 aa12.77□□□□□ -0.37
ZEB1-221ENST00000561061 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
ZEB1-221ENST00000561061 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
ZEB1-221ENST00000561061 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
ZEB1-221ENST00000561061 TARBP1Q13395 1621 aaKnown RBP12.71□□□□□ -0.37
ZEB1-221ENST00000561061 ABCC8Q09428 1581 aa12.68□□□□□ -0.38
ZEB1-221ENST00000561061 ARAP1Q96P48 1450 aa12.63□□□□□ -0.39
ZEB1-221ENST00000561061 ZBTB22O15209 634 aa12.61□□□□□ -0.39
ZEB1-221ENST00000561061 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
ZEB1-221ENST00000561061 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
ZEB1-221ENST00000561061 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
ZEB1-221ENST00000561061 WDR97A6NE52 1622 aa12.58□□□□□ -0.4
ZEB1-221ENST00000561061 CYB5RLQ6IPT4 315 aa12.55□□□□□ -0.4
ZEB1-221ENST00000561061 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
ZEB1-221ENST00000561061 CLASP1Q7Z460 1538 aa12.55□□□□□ -0.4
ZEB1-221ENST00000561061 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms