RNA–Protein interactions for RNA: ENST00000400824.8

AFDN-208, Transcript of afadin, adherens junction formation factor, humanhuman

TSL 5

Gene AFDN, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFDN-208ENST00000400824 NISCHQ9Y2I1 1504 aa66.57■■■■■ 8.25
AFDN-208ENST00000400824 ABCC9O60706 1549 aa60.21■■■■■ 7.23
AFDN-208ENST00000400824 CCDC180Q9P1Z9 1646 aa59.9■■■■■ 7.18
AFDN-208ENST00000400824 RB1CC1Q8TDY2 1594 aa57.18■■■■■ 6.74
AFDN-208ENST00000400824 DNAJC5BQ9UF47 199 aa56.85■■■■■ 6.69
AFDN-208ENST00000400824 NACADO15069 1562 aa56.71■■■■■ 6.67
AFDN-208ENST00000400824 DCAF8L2P0C7V8 631 aa56.27■■■■■ 6.6
AFDN-208ENST00000400824 PABPN1Q86U42 306 aaKnown RBP eCLIP56■■■■■ 6.56
AFDN-208ENST00000400824 UNC13AQ9UPW8 1703 aa55.94■■■■■ 6.55
AFDN-208ENST00000400824 MYO15BQ96JP2 1530 aa55.83■■■■■ 6.53
AFDN-208ENST00000400824 BICRAQ9NZM4 1560 aa55.56■■■■■ 6.48
AFDN-208ENST00000400824 ZCCHC6Q5VYS8 1495 aaKnown RBP55.09■■■■■ 6.41
AFDN-208ENST00000400824 DCAF1Q9Y4B6 1507 aa54.98■■■■■ 6.39
AFDN-208ENST00000400824 SHROOM4Q9ULL8 1493 aa54.75■■■■■ 6.36
AFDN-208ENST00000400824 SCRIBQ14160 1630 aa54.52■■■■■ 6.32
AFDN-208ENST00000400824 CC2D2AQ9P2K1 1620 aa54.41■■■■■ 6.3
AFDN-208ENST00000400824 CECR2Q9BXF3 1484 aa54.28■■■■■ 6.28
AFDN-208ENST00000400824 EIF4G1Q04637 1599 aaKnown RBP54.2■■■■■ 6.27
AFDN-208ENST00000400824 DNAJC5Q9H3Z4 198 aa52.46■■■■■ 5.99
AFDN-208ENST00000400824 NCAPD3P42695 1498 aa52.37■■■■■ 5.97
AFDN-208ENST00000400824 ATAD2BQ9ULI0 1458 aa52.15■■■■■ 5.94
AFDN-208ENST00000400824 CUX2O14529 1486 aa52.06■■■■■ 5.92
AFDN-208ENST00000400824 SMARCA4P51532 1647 aa52■■■■■ 5.92
AFDN-208ENST00000400824 ERCC6Q03468 1493 aa51.99■■■■■ 5.91
AFDN-208ENST00000400824 SMARCA2P51531 1590 aa51.96■■■■■ 5.91
AFDN-208ENST00000400824 HMGXB3Q12766 1538 aa51.93■■■■■ 5.9
AFDN-208ENST00000400824 BAZ1AQ9NRL2 1556 aaPredicted RBP51.68■■■■■ 5.86
AFDN-208ENST00000400824 NESP48681 1621 aa51.64■■■■■ 5.86
AFDN-208ENST00000400824 BAZ1BQ9UIG0 1483 aaKnown RBP51.59■■■■■ 5.85
AFDN-208ENST00000400824 PEG3Q9GZU2 1588 aa51.52■■■■■ 5.84
AFDN-208ENST00000400824 MROH2BQ7Z745 1585 aa51.28■■■■■ 5.8
AFDN-208ENST00000400824 LAMC3Q9Y6N6 1575 aa51.23■■■■■ 5.79
AFDN-208ENST00000400824 THOC2Q8NI27 1593 aaKnown RBP51.2■■■■■ 5.79
AFDN-208ENST00000400824 KIF21AQ7Z4S6 1674 aa50.98■■■■■ 5.75
AFDN-208ENST00000400824 PDS5BQ9NTI5 1447 aa50.93■■■■■ 5.74
AFDN-208ENST00000400824 CADPSQ9ULU8 1353 aa50.74■■■■■ 5.71
AFDN-208ENST00000400824 WIZO95785 1651 aa50.66■■■■■ 5.7
AFDN-208ENST00000400824 MRC2Q9UBG0 1479 aa50.52■■■■■ 5.68
AFDN-208ENST00000400824 WDR62O43379 1518 aa50.41■■■■■ 5.66
AFDN-208ENST00000400824 CEP164Q9UPV0 1460 aa50.23■■■■■ 5.63
AFDN-208ENST00000400824 FANCD2Q9BXW9 1451 aa50.15■■■■■ 5.62
AFDN-208ENST00000400824 CFTRP13569 1480 aa50.1■■■■■ 5.61
AFDN-208ENST00000400824 RSF1Q96T23 1441 aaPredicted RBP50.09■■■■■ 5.61
AFDN-208ENST00000400824 TOP2AP11388 1531 aaKnown RBP49.98■■■■■ 5.59
AFDN-208ENST00000400824 TRIM41Q8WV44 630 aa49.95■■■■■ 5.59
AFDN-208ENST00000400824 URB2Q14146 1524 aaKnown RBP49.78■■■■■ 5.56
AFDN-208ENST00000400824 OSCARQ8IYS5 282 aa49.62■■■■■ 5.53
AFDN-208ENST00000400824 PRDM2Q13029 1718 aa49.59■■■■■ 5.53
AFDN-208ENST00000400824 CCDC88BA6NC98 1476 aa49.43■■■■■ 5.5
AFDN-208ENST00000400824 IFT140Q96RY7 1462 aa49.25■■■■■ 5.48
AFDN-208ENST00000400824 ZNF608Q9ULD9 1512 aaPredicted RBP49.22■■■■■ 5.47
AFDN-208ENST00000400824 TOPBP1Q92547 1522 aa49.18■■■■■ 5.46
AFDN-208ENST00000400824 ABCC8Q09428 1581 aa49.05■■■■■ 5.44
AFDN-208ENST00000400824 RIMBP3CA6NJZ7 1639 aa49.03■■■■■ 5.44
AFDN-208ENST00000400824 RIMBP3BA6NNM3 1639 aa49.03■■■■■ 5.44
AFDN-208ENST00000400824 RIMBP3Q9UFD9 1639 aa49.03■■■■■ 5.44
AFDN-208ENST00000400824 DNMBPQ6XZF7 1577 aa48.96■■■■■ 5.43
AFDN-208ENST00000400824 EIF4G3O43432 1585 aaKnown RBP48.93■■■■■ 5.42
AFDN-208ENST00000400824 ARHGEF11O15085 1522 aa48.83■■■■■ 5.41
AFDN-208ENST00000400824 TARBP1Q13395 1621 aaKnown RBP48.8■■■■■ 5.4
AFDN-208ENST00000400824 AQRO60306 1485 aaKnown RBP eCLIP48.73■■■■■ 5.396e-10■■■■□ 22.7
AFDN-208ENST00000400824 POLA1P09884 1462 aaPredicted RBP48.66■■■■■ 5.38
AFDN-208ENST00000400824 CHD1O14646 1710 aa48.65■■■■■ 5.38
AFDN-208ENST00000400824 RAD54L2Q9Y4B4 1467 aa48.48■■■■■ 5.35
AFDN-208ENST00000400824 CYB5RLQ6IPT4 315 aa48.47■■■■■ 5.35
AFDN-208ENST00000400824 FBLN2P98095 1184 aa48.43■■■■■ 5.34
AFDN-208ENST00000400824 SOGA1O94964 1423 aa48.41■■■■■ 5.34
AFDN-208ENST00000400824 TDRD9Q8NDG6 1382 aaKnown RBP48.37■■■■■ 5.33
AFDN-208ENST00000400824 ARAP1Q96P48 1450 aa48.32■■■■■ 5.33
AFDN-208ENST00000400824 FGD5Q6ZNL6 1462 aa48.29■■■■■ 5.32
AFDN-208ENST00000400824 WDR97A6NE52 1622 aa48.26■■■■■ 5.32
AFDN-208ENST00000400824 SNAPC4Q5SXM2 1469 aa48.21■■■■■ 5.31
AFDN-208ENST00000400824 CUX1P39880 1505 aa48.2■■■■■ 5.31
AFDN-208ENST00000400824 CLASP1Q7Z460 1538 aa48.08■■■■■ 5.29
AFDN-208ENST00000400824 MAGI1Q96QZ7 1491 aaPredicted RBP48.08■■■■■ 5.29
AFDN-208ENST00000400824 CHMP7Q8WUX9 453 aaPredicted RBP48.04■■■■■ 5.28
AFDN-208ENST00000400824 GRIN2BQ13224 1484 aa48.04■■■■■ 5.28
AFDN-208ENST00000400824 TRHP20396 242 aaPredicted RBP48.01■■■■■ 5.28
AFDN-208ENST00000400824 SYNJ1O43426 1573 aa48■■■■■ 5.27
AFDN-208ENST00000400824 SYNJ2O15056 1496 aa47.91■■■■■ 5.26
AFDN-208ENST00000400824 PBRM1Q86U86 1689 aa47.84■■■■■ 5.25
AFDN-208ENST00000400824 GAPVD1Q14C86 1478 aa47.82■■■■■ 5.25
AFDN-208ENST00000400824 ABCA10Q8WWZ4 1543 aa47.73■■■■■ 5.23
AFDN-208ENST00000400824 ABCA5Q8WWZ7 1642 aa47.7■■■■■ 5.23
AFDN-208ENST00000400824 SUPT5HO00267 1087 aaKnown RBP47.55■■■■■ 5.2
AFDN-208ENST00000400824 WRNQ14191 1432 aaPredicted RBP eCLIP47.44■■■■■ 5.183e-7■■■■□ 25.1
AFDN-208ENST00000400824 GRIN2AQ12879 1464 aa47.42■■■■■ 5.18
AFDN-208ENST00000400824 ADAMTS12P58397 1594 aa47.36■■■■■ 5.17
AFDN-208ENST00000400824 BIVM-ERCC5R4GMW8 1640 aa47.35■■■■■ 5.17
AFDN-208ENST00000400824 TOP2BQ02880 1626 aa47.34■■■■■ 5.17
AFDN-208ENST00000400824 ERCC6L2Q5T890 1561 aa47.31■■■■■ 5.16
AFDN-208ENST00000400824 NUP160Q12769 1436 aa47.3■■■■■ 5.16
AFDN-208ENST00000400824 CEP170Q5SW79 1584 aa47.28■■■■■ 5.16
AFDN-208ENST00000400824 FHAD1B1AJZ9 1412 aa47.21■■■■■ 5.15
AFDN-208ENST00000400824 SHROOM2Q13796 1616 aa47.14■■■■■ 5.14
AFDN-208ENST00000400824 ERICH3Q5RHP9 1530 aa47.12■■■■■ 5.13
AFDN-208ENST00000400824 AEBP2Q6ZN18 517 aaPredicted RBP46.87■■■■■ 5.09
AFDN-208ENST00000400824 PRG4Q92954 1404 aaPredicted RBP46.84■■■■■ 5.09
AFDN-208ENST00000400824 JPH4Q96JJ6 628 aa46.79■■■■■ 5.08
AFDN-208ENST00000400824 KIF13AQ9H1H9 1805 aa46.72■■■■■ 5.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms