RNA–Protein interactions for RNA: ENST00000400825.8

AFDN-209, Transcript of afadin, adherens junction formation factor, humanhuman

TSL 5

Gene AFDN, Length 963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFDN-209ENST00000400825 NISCHQ9Y2I1 1504 aa71.29■■■■■ 9
AFDN-209ENST00000400825 CCDC180Q9P1Z9 1646 aa63.95■■■■■ 7.83
AFDN-209ENST00000400825 ABCC9O60706 1549 aa63.91■■■■■ 7.82
AFDN-209ENST00000400825 RB1CC1Q8TDY2 1594 aa60.86■■■■■ 7.33
AFDN-209ENST00000400825 NACADO15069 1562 aa60.47■■■■■ 7.27
AFDN-209ENST00000400825 DCAF8L2P0C7V8 631 aa60.09■■■■■ 7.21
AFDN-209ENST00000400825 DNAJC5BQ9UF47 199 aa59.94■■■■■ 7.19
AFDN-209ENST00000400825 MYO15BQ96JP2 1530 aa59.68■■■■■ 7.14
AFDN-209ENST00000400825 PABPN1Q86U42 306 aaKnown RBP eCLIP59.49■■■■■ 7.11
AFDN-209ENST00000400825 UNC13AQ9UPW8 1703 aa59.46■■■■■ 7.11
AFDN-209ENST00000400825 BICRAQ9NZM4 1560 aa59.1■■■■■ 7.05
AFDN-209ENST00000400825 ZCCHC6Q5VYS8 1495 aaKnown RBP59.1■■■■■ 7.05
AFDN-209ENST00000400825 DCAF1Q9Y4B6 1507 aa58.92■■■■■ 7.02
AFDN-209ENST00000400825 SHROOM4Q9ULL8 1493 aa58.35■■■■■ 6.93
AFDN-209ENST00000400825 SCRIBQ14160 1630 aa58.25■■■■■ 6.92
AFDN-209ENST00000400825 CC2D2AQ9P2K1 1620 aa57.74■■■■■ 6.83
AFDN-209ENST00000400825 EIF4G1Q04637 1599 aaKnown RBP57.64■■■■■ 6.82
AFDN-209ENST00000400825 CECR2Q9BXF3 1484 aa57.58■■■■■ 6.81
AFDN-209ENST00000400825 NCAPD3P42695 1498 aa55.84■■■■■ 6.53
AFDN-209ENST00000400825 ATAD2BQ9ULI0 1458 aa55.66■■■■■ 6.5
AFDN-209ENST00000400825 SMARCA4P51532 1647 aa55.6■■■■■ 6.49
AFDN-209ENST00000400825 SMARCA2P51531 1590 aa55.5■■■■■ 6.48
AFDN-209ENST00000400825 HMGXB3Q12766 1538 aa55.41■■■■■ 6.46
AFDN-209ENST00000400825 BAZ1AQ9NRL2 1556 aaPredicted RBP55.33■■■■■ 6.45
AFDN-209ENST00000400825 ERCC6Q03468 1493 aa55.18■■■■■ 6.42
AFDN-209ENST00000400825 CUX2O14529 1486 aa55.11■■■■■ 6.41
AFDN-209ENST00000400825 BAZ1BQ9UIG0 1483 aaKnown RBP55.11■■■■■ 6.41
AFDN-209ENST00000400825 PEG3Q9GZU2 1588 aa55.09■■■■■ 6.41
AFDN-209ENST00000400825 DNAJC5Q9H3Z4 198 aa55.04■■■■■ 6.4
AFDN-209ENST00000400825 MROH2BQ7Z745 1585 aa54.93■■■■■ 6.38
AFDN-209ENST00000400825 NESP48681 1621 aa54.92■■■■■ 6.38
AFDN-209ENST00000400825 LAMC3Q9Y6N6 1575 aa54.55■■■■■ 6.32
AFDN-209ENST00000400825 THOC2Q8NI27 1593 aaKnown RBP54.37■■■■■ 6.29
AFDN-209ENST00000400825 WIZO95785 1651 aa54.24■■■■■ 6.27
AFDN-209ENST00000400825 PDS5BQ9NTI5 1447 aa54.24■■■■■ 6.27
AFDN-209ENST00000400825 KIF21AQ7Z4S6 1674 aa54.19■■■■■ 6.27
AFDN-209ENST00000400825 CADPSQ9ULU8 1353 aa54.13■■■■■ 6.26
AFDN-209ENST00000400825 RSF1Q96T23 1441 aaPredicted RBP53.8■■■■■ 6.2
AFDN-209ENST00000400825 MRC2Q9UBG0 1479 aa53.77■■■■■ 6.2
AFDN-209ENST00000400825 WDR62O43379 1518 aa53.65■■■■■ 6.18
AFDN-209ENST00000400825 TOP2AP11388 1531 aaKnown RBP53.59■■■■■ 6.17
AFDN-209ENST00000400825 CEP164Q9UPV0 1460 aa53.56■■■■■ 6.16
AFDN-209ENST00000400825 CFTRP13569 1480 aa53.52■■■■■ 6.16
AFDN-209ENST00000400825 FANCD2Q9BXW9 1451 aa53.5■■■■■ 6.15
AFDN-209ENST00000400825 URB2Q14146 1524 aaKnown RBP53.07■■■■■ 6.09
AFDN-209ENST00000400825 CCDC88BA6NC98 1476 aa52.98■■■■■ 6.07
AFDN-209ENST00000400825 PRDM2Q13029 1718 aa52.95■■■■■ 6.07
AFDN-209ENST00000400825 TRIM41Q8WV44 630 aa52.58■■■■■ 6.01
AFDN-209ENST00000400825 OSCARQ8IYS5 282 aa52.57■■■■■ 6.01
AFDN-209ENST00000400825 TOPBP1Q92547 1522 aa52.5■■■■■ 5.99
AFDN-209ENST00000400825 IFT140Q96RY7 1462 aa52.5■■■■■ 5.99
AFDN-209ENST00000400825 ABCC8Q09428 1581 aa52.4■■■■■ 5.98
AFDN-209ENST00000400825 ZNF608Q9ULD9 1512 aaPredicted RBP52.4■■■■■ 5.98
AFDN-209ENST00000400825 DNMBPQ6XZF7 1577 aa52.3■■■■■ 5.96
AFDN-209ENST00000400825 EIF4G3O43432 1585 aaKnown RBP52.11■■■■■ 5.93
AFDN-209ENST00000400825 TARBP1Q13395 1621 aaKnown RBP52.03■■■■■ 5.92
AFDN-209ENST00000400825 POLA1P09884 1462 aaPredicted RBP51.97■■■■■ 5.91
AFDN-209ENST00000400825 AQRO60306 1485 aaKnown RBP eCLIP51.92■■■■■ 5.96e-10■■■■□ 22.7
AFDN-209ENST00000400825 RIMBP3CA6NJZ7 1639 aa51.88■■■■■ 5.9
AFDN-209ENST00000400825 RIMBP3BA6NNM3 1639 aa51.88■■■■■ 5.9
AFDN-209ENST00000400825 RIMBP3Q9UFD9 1639 aa51.88■■■■■ 5.9
AFDN-209ENST00000400825 RAD54L2Q9Y4B4 1467 aa51.76■■■■■ 5.88
AFDN-209ENST00000400825 ARHGEF11O15085 1522 aa51.74■■■■■ 5.87
AFDN-209ENST00000400825 SOGA1O94964 1423 aa51.72■■■■■ 5.87
AFDN-209ENST00000400825 CHD1O14646 1710 aa51.7■■■■■ 5.87
AFDN-209ENST00000400825 FGD5Q6ZNL6 1462 aa51.64■■■■■ 5.86
AFDN-209ENST00000400825 TDRD9Q8NDG6 1382 aaKnown RBP51.61■■■■■ 5.85
AFDN-209ENST00000400825 CUX1P39880 1505 aa51.6■■■■■ 5.85
AFDN-209ENST00000400825 FBLN2P98095 1184 aa51.54■■■■■ 5.84
AFDN-209ENST00000400825 WDR97A6NE52 1622 aa51.52■■■■■ 5.84
AFDN-209ENST00000400825 SNAPC4Q5SXM2 1469 aa51.4■■■■■ 5.82
AFDN-209ENST00000400825 SUPT5HO00267 1087 aaKnown RBP51.39■■■■■ 5.82
AFDN-209ENST00000400825 CYB5RLQ6IPT4 315 aa51.33■■■■■ 5.81
AFDN-209ENST00000400825 MAGI1Q96QZ7 1491 aaPredicted RBP51.29■■■■■ 5.8
AFDN-209ENST00000400825 GRIN2BQ13224 1484 aa51.28■■■■■ 5.8
AFDN-209ENST00000400825 ARAP1Q96P48 1450 aa51.23■■■■■ 5.79
AFDN-209ENST00000400825 CHMP7Q8WUX9 453 aaPredicted RBP51.2■■■■■ 5.79
AFDN-209ENST00000400825 CLASP1Q7Z460 1538 aa51.15■■■■■ 5.78
AFDN-209ENST00000400825 SYNJ2O15056 1496 aa51.11■■■■■ 5.77
AFDN-209ENST00000400825 SYNJ1O43426 1573 aa51.11■■■■■ 5.77
AFDN-209ENST00000400825 GAPVD1Q14C86 1478 aa51.1■■■■■ 5.77
AFDN-209ENST00000400825 ABCA10Q8WWZ4 1543 aa51.08■■■■■ 5.77
AFDN-209ENST00000400825 PBRM1Q86U86 1689 aa51.05■■■■■ 5.76
AFDN-209ENST00000400825 ABCA5Q8WWZ7 1642 aa50.98■■■■■ 5.75
AFDN-209ENST00000400825 WRNQ14191 1432 aaPredicted RBP eCLIP50.86■■■■■ 5.733e-7■■■■□ 25.1
AFDN-209ENST00000400825 TOP2BQ02880 1626 aa50.78■■■■■ 5.72
AFDN-209ENST00000400825 BIVM-ERCC5R4GMW8 1640 aa50.78■■■■■ 5.72
AFDN-209ENST00000400825 TRHP20396 242 aaPredicted RBP50.72■■■■■ 5.71
AFDN-209ENST00000400825 GRIN2AQ12879 1464 aa50.62■■■■■ 5.69
AFDN-209ENST00000400825 ADAMTS12P58397 1594 aa50.6■■■■■ 5.69
AFDN-209ENST00000400825 NUP160Q12769 1436 aa50.47■■■■■ 5.67
AFDN-209ENST00000400825 FHAD1B1AJZ9 1412 aa50.46■■■■■ 5.67
AFDN-209ENST00000400825 CEP170Q5SW79 1584 aa50.43■■■■■ 5.66
AFDN-209ENST00000400825 ERICH3Q5RHP9 1530 aa50.42■■■■■ 5.66
AFDN-209ENST00000400825 ERCC6L2Q5T890 1561 aa50.34■■■■■ 5.65
AFDN-209ENST00000400825 SHROOM2Q13796 1616 aa50.23■■■■■ 5.63
AFDN-209ENST00000400825 PRG4Q92954 1404 aaPredicted RBP49.95■■■■■ 5.59
AFDN-209ENST00000400825 JPH4Q96JJ6 628 aa49.93■■■■■ 5.58
AFDN-209ENST00000400825 RUSC2Q8N2Y8 1516 aa49.88■■■■■ 5.58
AFDN-209ENST00000400825 KIF27Q86VH2 1401 aa49.79■■■■■ 5.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms