RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
CCDC90B-211ENST00000529073 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.78
CCDC90B-211ENST00000529073 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
CCDC90B-211ENST00000529073 CCDC180Q9P1Z9 1646 aa24.87■■□□□ 1.57
CCDC90B-211ENST00000529073 ABCC9O60706 1549 aa24.51■■□□□ 1.51
CCDC90B-211ENST00000529073 DCAF8L2P0C7V8 631 aa23.41■■□□□ 1.34
CCDC90B-211ENST00000529073 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.33
CCDC90B-211ENST00000529073 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
CCDC90B-211ENST00000529073 NACADO15069 1562 aa23.32■■□□□ 1.32
CCDC90B-211ENST00000529073 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
CCDC90B-211ENST00000529073 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.29
CCDC90B-211ENST00000529073 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
CCDC90B-211ENST00000529073 PABPN1Q86U42 306 aaKnown RBP eCLIP22.89■■□□□ 1.25
CCDC90B-211ENST00000529073 SCRIBQ14160 1630 aa22.88■■□□□ 1.25
CCDC90B-211ENST00000529073 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
CCDC90B-211ENST00000529073 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
CCDC90B-211ENST00000529073 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
CCDC90B-211ENST00000529073 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
CCDC90B-211ENST00000529073 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
CCDC90B-211ENST00000529073 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
CCDC90B-211ENST00000529073 PHF23Q9BUL5 403 aaPredicted RBP21.98■■□□□ 1.11
CCDC90B-211ENST00000529073 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
CCDC90B-211ENST00000529073 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
CCDC90B-211ENST00000529073 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
CCDC90B-211ENST00000529073 BAZ1AQ9NRL2 1556 aaPredicted RBP21.65■■□□□ 1.06
CCDC90B-211ENST00000529073 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
CCDC90B-211ENST00000529073 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
CCDC90B-211ENST00000529073 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
CCDC90B-211ENST00000529073 WIZO95785 1651 aa21.5■■□□□ 1.03
CCDC90B-211ENST00000529073 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
CCDC90B-211ENST00000529073 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
CCDC90B-211ENST00000529073 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
CCDC90B-211ENST00000529073 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
CCDC90B-211ENST00000529073 NESP48681 1621 aa21.26■□□□□ 0.99
CCDC90B-211ENST00000529073 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
CCDC90B-211ENST00000529073 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
CCDC90B-211ENST00000529073 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
CCDC90B-211ENST00000529073 LAMC3Q9Y6N6 1575 aa20.98■□□□□ 0.95
CCDC90B-211ENST00000529073 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
CCDC90B-211ENST00000529073 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
CCDC90B-211ENST00000529073 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.93
CCDC90B-211ENST00000529073 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
CCDC90B-211ENST00000529073 CFTRP13569 1480 aa20.82■□□□□ 0.92
CCDC90B-211ENST00000529073 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
CCDC90B-211ENST00000529073 FANCD2Q9BXW9 1451 aa20.75■□□□□ 0.91
CCDC90B-211ENST00000529073 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
CCDC90B-211ENST00000529073 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
CCDC90B-211ENST00000529073 CUX2O14529 1486 aa20.69■□□□□ 0.9
CCDC90B-211ENST00000529073 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
CCDC90B-211ENST00000529073 FOXD1Q16676 465 aa20.67■□□□□ 0.9
CCDC90B-211ENST00000529073 WDR62O43379 1518 aa20.63■□□□□ 0.89
CCDC90B-211ENST00000529073 URB2Q14146 1524 aaKnown RBP20.63■□□□□ 0.89
CCDC90B-211ENST00000529073 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
CCDC90B-211ENST00000529073 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
CCDC90B-211ENST00000529073 CUX1P39880 1505 aa20.36■□□□□ 0.85
CCDC90B-211ENST00000529073 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
CCDC90B-211ENST00000529073 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
CCDC90B-211ENST00000529073 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
CCDC90B-211ENST00000529073 RAD54L2Q9Y4B4 1467 aa20.26■□□□□ 0.83
CCDC90B-211ENST00000529073 TARBP1Q13395 1621 aaKnown RBP20.26■□□□□ 0.83
CCDC90B-211ENST00000529073 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
CCDC90B-211ENST00000529073 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
CCDC90B-211ENST00000529073 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
CCDC90B-211ENST00000529073 EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
CCDC90B-211ENST00000529073 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC90B-211ENST00000529073 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
CCDC90B-211ENST00000529073 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
CCDC90B-211ENST00000529073 SOGA1O94964 1423 aa20.12■□□□□ 0.81
CCDC90B-211ENST00000529073 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
CCDC90B-211ENST00000529073 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
CCDC90B-211ENST00000529073 DNAJC5Q9H3Z4 198 aa20.09■□□□□ 0.81
CCDC90B-211ENST00000529073 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
CCDC90B-211ENST00000529073 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
CCDC90B-211ENST00000529073 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
CCDC90B-211ENST00000529073 CHD1O14646 1710 aa19.98■□□□□ 0.79
CCDC90B-211ENST00000529073 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
CCDC90B-211ENST00000529073 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
CCDC90B-211ENST00000529073 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
CCDC90B-211ENST00000529073 GAPVD1Q14C86 1478 aa19.9■□□□□ 0.78
CCDC90B-211ENST00000529073 GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
CCDC90B-211ENST00000529073 FBLN2P98095 1184 aa19.82■□□□□ 0.76
CCDC90B-211ENST00000529073 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
CCDC90B-211ENST00000529073 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
CCDC90B-211ENST00000529073 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
CCDC90B-211ENST00000529073 SYNJ2O15056 1496 aa19.75■□□□□ 0.75
CCDC90B-211ENST00000529073 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
CCDC90B-211ENST00000529073 RIMBP3CA6NJZ7 1639 aa19.71■□□□□ 0.75
CCDC90B-211ENST00000529073 RIMBP3BA6NNM3 1639 aa19.71■□□□□ 0.75
CCDC90B-211ENST00000529073 RIMBP3Q9UFD9 1639 aa19.71■□□□□ 0.75
CCDC90B-211ENST00000529073 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
CCDC90B-211ENST00000529073 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
CCDC90B-211ENST00000529073 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
CCDC90B-211ENST00000529073 CEP170Q5SW79 1584 aa19.68■□□□□ 0.74
CCDC90B-211ENST00000529073 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
CCDC90B-211ENST00000529073 ARHGEF11O15085 1522 aa19.65■□□□□ 0.74
CCDC90B-211ENST00000529073 FHAD1B1AJZ9 1412 aa19.63■□□□□ 0.73
CCDC90B-211ENST00000529073 KIF27Q86VH2 1401 aa19.6■□□□□ 0.73
CCDC90B-211ENST00000529073 IGF1RP08069 1367 aa19.6■□□□□ 0.73
CCDC90B-211ENST00000529073 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
CCDC90B-211ENST00000529073 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms