RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 NISCHQ9Y2I1 1504 aa17.88■□□□□ 0.45
CCDC90B-214ENST00000529689 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
CCDC90B-214ENST00000529689 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
CCDC90B-214ENST00000529689 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
CCDC90B-214ENST00000529689 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
CCDC90B-214ENST00000529689 PCGF6Q9BYE7 350 aa16.23■□□□□ 0.19
CCDC90B-214ENST00000529689 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-214ENST00000529689 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
CCDC90B-214ENST00000529689 LOC105371045A0A1W2PR82 267 aa15.79■□□□□ 0.12
CCDC90B-214ENST00000529689 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
CCDC90B-214ENST00000529689 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
CCDC90B-214ENST00000529689 HRCP23327 699 aa15.65■□□□□ 0.1
CCDC90B-214ENST00000529689 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
CCDC90B-214ENST00000529689 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
CCDC90B-214ENST00000529689 CCER1Q8TC90 406 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-214ENST00000529689 TRIM26Q12899 539 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-214ENST00000529689 ZEB1P37275 1124 aaPredicted RBP15.26■□□□□ 0.03
CCDC90B-214ENST00000529689 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
CCDC90B-214ENST00000529689 APLP2Q06481 763 aa15.22■□□□□ 0.03
CCDC90B-214ENST00000529689 YTHDC1Q96MU7 727 aaKnown RBP15.19■□□□□ 0.02
CCDC90B-214ENST00000529689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
CCDC90B-214ENST00000529689 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
CCDC90B-214ENST00000529689 CENPBP07199 599 aaPredicted RBP15.05■□□□□ -0
CCDC90B-214ENST00000529689 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
CCDC90B-214ENST00000529689 ATP1B4Q9UN42 357 aaPredicted RBP14.93□□□□□ -0.02
CCDC90B-214ENST00000529689 ZCCHC6Q5VYS8 1495 aaKnown RBP14.91□□□□□ -0.02
CCDC90B-214ENST00000529689 ABCC9O60706 1549 aa14.87□□□□□ -0.03
CCDC90B-214ENST00000529689 ITGAEP38570 1179 aa14.86□□□□□ -0.03
CCDC90B-214ENST00000529689 DIEXFQ68CQ4 756 aaKnown RBP14.83□□□□□ -0.04
CCDC90B-214ENST00000529689 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
CCDC90B-214ENST00000529689 PELP1Q8IZL8 1130 aaKnown RBP14.78□□□□□ -0.04
CCDC90B-214ENST00000529689 GTF3C3Q9Y5Q9 886 aa14.71□□□□□ -0.05
CCDC90B-214ENST00000529689 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
CCDC90B-214ENST00000529689 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
CCDC90B-214ENST00000529689 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
CCDC90B-214ENST00000529689 ACIN1Q9UKV3 1341 aaKnown RBP14.54□□□□□ -0.08
CCDC90B-214ENST00000529689 NEUROD1Q13562 356 aa14.52□□□□□ -0.08
CCDC90B-214ENST00000529689 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.08
CCDC90B-214ENST00000529689 CNGB1Q14028 1251 aaPredicted RBP14.49□□□□□ -0.09
CCDC90B-214ENST00000529689 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
CCDC90B-214ENST00000529689 RSF1Q96T23 1441 aaPredicted RBP14.48□□□□□ -0.09
CCDC90B-214ENST00000529689 NEFLP07196 543 aa14.41□□□□□ -0.1
CCDC90B-214ENST00000529689 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
CCDC90B-214ENST00000529689 BCANQ96GW7 911 aa14.41□□□□□ -0.1
CCDC90B-214ENST00000529689 FAM50AQ14320 339 aaKnown RBP14.38□□□□□ -0.11
CCDC90B-214ENST00000529689 P3H3Q8IVL6 736 aa14.34□□□□□ -0.11
CCDC90B-214ENST00000529689 POLR3GLQ9BT43 218 aa14.33□□□□□ -0.12
CCDC90B-214ENST00000529689 ERICH6Q7L0X2 663 aa14.31□□□□□ -0.12
CCDC90B-214ENST00000529689 MIER1Q8N108 512 aa14.31□□□□□ -0.12
CCDC90B-214ENST00000529689 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
CCDC90B-214ENST00000529689 RB1CC1Q8TDY2 1594 aa14.18□□□□□ -0.14
CCDC90B-214ENST00000529689 ARID3CA6NKF2 412 aa14.17□□□□□ -0.14
CCDC90B-214ENST00000529689 HIRIP3Q9BW71 556 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-214ENST00000529689 CEP162Q5TB80 1403 aa14.16□□□□□ -0.14
CCDC90B-214ENST00000529689 MYT1Q01538 1121 aa14.14□□□□□ -0.15
CCDC90B-214ENST00000529689 DDX10Q13206 875 aaKnown RBP14.12□□□□□ -0.15
CCDC90B-214ENST00000529689 TRIM52Q96A61 297 aa14.12□□□□□ -0.15
CCDC90B-214ENST00000529689 SOGA1O94964 1423 aa14.1□□□□□ -0.15
CCDC90B-214ENST00000529689 CLIP1P30622 1438 aa14.06□□□□□ -0.16
CCDC90B-214ENST00000529689 MROH2BQ7Z745 1585 aa14.06□□□□□ -0.16
CCDC90B-214ENST00000529689 ANP32CO43423 234 aa14.04□□□□□ -0.16
CCDC90B-214ENST00000529689 FKBP8Q14318 412 aa14.03□□□□□ -0.16
CCDC90B-214ENST00000529689 ZNF326Q5BKZ1 582 aaKnown RBP14.03□□□□□ -0.16
CCDC90B-214ENST00000529689 ABCC8Q09428 1581 aa14□□□□□ -0.17
CCDC90B-214ENST00000529689 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
CCDC90B-214ENST00000529689 TNIKQ9UKE5 1360 aa13.97□□□□□ -0.17
CCDC90B-214ENST00000529689 WRNQ14191 1432 aaPredicted RBP eCLIP13.95□□□□□ -0.18
CCDC90B-214ENST00000529689 CHIC2Q9UKJ5 165 aa13.93□□□□□ -0.18
CCDC90B-214ENST00000529689 GOLGA3Q08378 1498 aa13.92□□□□□ -0.18
CCDC90B-214ENST00000529689 IRX6P78412 446 aaPredicted RBP13.92□□□□□ -0.18
CCDC90B-214ENST00000529689 SIN3AQ96ST3 1273 aa13.9□□□□□ -0.18
CCDC90B-214ENST00000529689 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
CCDC90B-214ENST00000529689 WIZO95785 1651 aa13.88□□□□□ -0.19
CCDC90B-214ENST00000529689 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC90B-214ENST00000529689 KANK4Q5T7N3 995 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-214ENST00000529689 RUSC2Q8N2Y8 1516 aa13.86□□□□□ -0.19
CCDC90B-214ENST00000529689 FBLN2P98095 1184 aa13.86□□□□□ -0.19
CCDC90B-214ENST00000529689 MYT1LQ9UL68 1186 aa13.84□□□□□ -0.19
CCDC90B-214ENST00000529689 NACADO15069 1562 aa13.83□□□□□ -0.19
CCDC90B-214ENST00000529689 FAM9BQ8IZU0 186 aa13.83□□□□□ -0.19
CCDC90B-214ENST00000529689 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
CCDC90B-214ENST00000529689 ZNF777Q9ULD5 760 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-214ENST00000529689 EEA1Q15075 1411 aa13.81□□□□□ -0.2
CCDC90B-214ENST00000529689 BAZ1AQ9NRL2 1556 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-214ENST00000529689 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-214ENST00000529689 CEP164Q9UPV0 1460 aa13.78□□□□□ -0.2
CCDC90B-214ENST00000529689 RRP7BPQ9NSQ0 103 aa13.77□□□□□ -0.2
CCDC90B-214ENST00000529689 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-214ENST00000529689 SUPT16HQ9Y5B9 1047 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-214ENST00000529689 KCNH8Q96L42 1107 aa13.74□□□□□ -0.21
CCDC90B-214ENST00000529689 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-214ENST00000529689 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
CCDC90B-214ENST00000529689 MTUS2Q5JR59 1369 aa13.68□□□□□ -0.22
CCDC90B-214ENST00000529689 VPS8Q8N3P4 1428 aa13.68□□□□□ -0.22
CCDC90B-214ENST00000529689 DAXXQ9UER7 740 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-214ENST00000529689 MRS2Q9HD23 443 aa13.66□□□□□ -0.22
CCDC90B-214ENST00000529689 CCNB3Q8WWL7 1395 aa13.65□□□□□ -0.22
CCDC90B-214ENST00000529689 NPM2Q86SE8 214 aaKnown RBP13.65□□□□□ -0.22
CCDC90B-214ENST00000529689 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
CCDC90B-214ENST00000529689 KIF27Q86VH2 1401 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms