RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 AEBP2Q6ZN18 517 aaPredicted RBP23.64■■□□□ 1.37
CCDC90B-208ENST00000527025 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
CCDC90B-208ENST00000527025 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
CCDC90B-208ENST00000527025 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
CCDC90B-208ENST00000527025 PHF23Q9BUL5 403 aaPredicted RBP19.82■□□□□ 0.76
CCDC90B-208ENST00000527025 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.68
CCDC90B-208ENST00000527025 ABCC9O60706 1549 aa19.04■□□□□ 0.64
CCDC90B-208ENST00000527025 FOXD1Q16676 465 aa18.82■□□□□ 0.6
CCDC90B-208ENST00000527025 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
CCDC90B-208ENST00000527025 RB1CC1Q8TDY2 1594 aa18.21■□□□□ 0.51
CCDC90B-208ENST00000527025 NACADO15069 1562 aa18.18■□□□□ 0.5
CCDC90B-208ENST00000527025 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-208ENST00000527025 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
CCDC90B-208ENST00000527025 DCAF1Q9Y4B6 1507 aa17.97■□□□□ 0.47
CCDC90B-208ENST00000527025 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
CCDC90B-208ENST00000527025 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
CCDC90B-208ENST00000527025 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
CCDC90B-208ENST00000527025 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
CCDC90B-208ENST00000527025 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
CCDC90B-208ENST00000527025 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
CCDC90B-208ENST00000527025 MSH5O43196 834 aa17.56■□□□□ 0.4
CCDC90B-208ENST00000527025 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
CCDC90B-208ENST00000527025 PPP6R1Q9UPN7 881 aa17.48■□□□□ 0.39
CCDC90B-208ENST00000527025 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
CCDC90B-208ENST00000527025 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
CCDC90B-208ENST00000527025 ADRA2BP18089 450 aa17.38■□□□□ 0.37
CCDC90B-208ENST00000527025 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
CCDC90B-208ENST00000527025 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
CCDC90B-208ENST00000527025 CECR2Q9BXF3 1484 aa17.08■□□□□ 0.32
CCDC90B-208ENST00000527025 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
CCDC90B-208ENST00000527025 MROH2BQ7Z745 1585 aa16.83■□□□□ 0.28
CCDC90B-208ENST00000527025 BAZ1AQ9NRL2 1556 aaPredicted RBP16.83■□□□□ 0.28
CCDC90B-208ENST00000527025 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.28
CCDC90B-208ENST00000527025 NCAPD3P42695 1498 aa16.82■□□□□ 0.28
CCDC90B-208ENST00000527025 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
CCDC90B-208ENST00000527025 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
CCDC90B-208ENST00000527025 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
CCDC90B-208ENST00000527025 WIZO95785 1651 aa16.65■□□□□ 0.26
CCDC90B-208ENST00000527025 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
CCDC90B-208ENST00000527025 RSF1Q96T23 1441 aaPredicted RBP16.6■□□□□ 0.25
CCDC90B-208ENST00000527025 NESP48681 1621 aa16.51■□□□□ 0.23
CCDC90B-208ENST00000527025 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-208ENST00000527025 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
CCDC90B-208ENST00000527025 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
CCDC90B-208ENST00000527025 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
CCDC90B-208ENST00000527025 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.2
CCDC90B-208ENST00000527025 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
CCDC90B-208ENST00000527025 CFTRP13569 1480 aa16.22■□□□□ 0.19
CCDC90B-208ENST00000527025 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
CCDC90B-208ENST00000527025 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.18
CCDC90B-208ENST00000527025 CUX2O14529 1486 aa16.16■□□□□ 0.18
CCDC90B-208ENST00000527025 SUPT5HO00267 1087 aaKnown RBP16.13■□□□□ 0.17
CCDC90B-208ENST00000527025 FANCD2Q9BXW9 1451 aa16.13■□□□□ 0.17
CCDC90B-208ENST00000527025 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
CCDC90B-208ENST00000527025 CEP164Q9UPV0 1460 aa16.08■□□□□ 0.16
CCDC90B-208ENST00000527025 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
CCDC90B-208ENST00000527025 WDR62O43379 1518 aa16.05■□□□□ 0.16
CCDC90B-208ENST00000527025 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-208ENST00000527025 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.15
CCDC90B-208ENST00000527025 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
CCDC90B-208ENST00000527025 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
CCDC90B-208ENST00000527025 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.12
CCDC90B-208ENST00000527025 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.12
CCDC90B-208ENST00000527025 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
CCDC90B-208ENST00000527025 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
CCDC90B-208ENST00000527025 CUX1P39880 1505 aa15.77■□□□□ 0.11
CCDC90B-208ENST00000527025 IFT140Q96RY7 1462 aa15.75■□□□□ 0.11
CCDC90B-208ENST00000527025 POLA1P09884 1462 aaPredicted RBP15.74■□□□□ 0.11
CCDC90B-208ENST00000527025 TARBP1Q13395 1621 aaKnown RBP15.74■□□□□ 0.11
CCDC90B-208ENST00000527025 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
CCDC90B-208ENST00000527025 RAD54L2Q9Y4B4 1467 aa15.72■□□□□ 0.11
CCDC90B-208ENST00000527025 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
CCDC90B-208ENST00000527025 AQRO60306 1485 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC90B-208ENST00000527025 SOGA1O94964 1423 aa15.67■□□□□ 0.1
CCDC90B-208ENST00000527025 EIF4G3O43432 1585 aaKnown RBP15.66■□□□□ 0.1
CCDC90B-208ENST00000527025 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
CCDC90B-208ENST00000527025 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
CCDC90B-208ENST00000527025 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
CCDC90B-208ENST00000527025 WDR97A6NE52 1622 aa15.58■□□□□ 0.09
CCDC90B-208ENST00000527025 TOP2BQ02880 1626 aa15.58■□□□□ 0.09
CCDC90B-208ENST00000527025 BIVM-ERCC5R4GMW8 1640 aa15.58■□□□□ 0.09
CCDC90B-208ENST00000527025 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
CCDC90B-208ENST00000527025 ABCA10Q8WWZ4 1543 aa15.52■□□□□ 0.07
CCDC90B-208ENST00000527025 CHD1O14646 1710 aa15.49■□□□□ 0.07
CCDC90B-208ENST00000527025 ABCA5Q8WWZ7 1642 aa15.49■□□□□ 0.07
CCDC90B-208ENST00000527025 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
CCDC90B-208ENST00000527025 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
CCDC90B-208ENST00000527025 PBRM1Q86U86 1689 aa15.46■□□□□ 0.07
CCDC90B-208ENST00000527025 GRIN2BQ13224 1484 aa15.46■□□□□ 0.06
CCDC90B-208ENST00000527025 FBLN2P98095 1184 aa15.44■□□□□ 0.06
CCDC90B-208ENST00000527025 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
CCDC90B-208ENST00000527025 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
CCDC90B-208ENST00000527025 CHMP7Q8WUX9 453 aaPredicted RBP15.37■□□□□ 0.05
CCDC90B-208ENST00000527025 SYNJ2O15056 1496 aa15.37■□□□□ 0.05
CCDC90B-208ENST00000527025 RIMBP3CA6NJZ7 1639 aa15.33■□□□□ 0.04
CCDC90B-208ENST00000527025 RIMBP3BA6NNM3 1639 aa15.33■□□□□ 0.04
CCDC90B-208ENST00000527025 RIMBP3Q9UFD9 1639 aa15.33■□□□□ 0.04
CCDC90B-208ENST00000527025 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
CCDC90B-208ENST00000527025 CLASP1Q7Z460 1538 aa15.32■□□□□ 0.04
CCDC90B-208ENST00000527025 ERICH3Q5RHP9 1530 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms