RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 NISCHQ9Y2I1 1504 aa37.31■■■■□ 3.56
CCDC90B-201ENST00000260054 CCDC180Q9P1Z9 1646 aa32.85■■■□□ 2.85
CCDC90B-201ENST00000260054 ABCC9O60706 1549 aa31.65■■■□□ 2.66
CCDC90B-201ENST00000260054 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
CCDC90B-201ENST00000260054 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
CCDC90B-201ENST00000260054 DCAF1Q9Y4B6 1507 aa30.87■■■□□ 2.53
CCDC90B-201ENST00000260054 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
CCDC90B-201ENST00000260054 NACADO15069 1562 aa30.76■■■□□ 2.51
CCDC90B-201ENST00000260054 RB1CC1Q8TDY2 1594 aa30.65■■■□□ 2.5
CCDC90B-201ENST00000260054 SCRIBQ14160 1630 aa30.1■■■□□ 2.41
CCDC90B-201ENST00000260054 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
CCDC90B-201ENST00000260054 SHROOM4Q9ULL8 1493 aa29.92■■■□□ 2.38
CCDC90B-201ENST00000260054 BICRAQ9NZM4 1560 aa29.75■■■□□ 2.35
CCDC90B-201ENST00000260054 PABPN1Q86U42 306 aaKnown RBP eCLIP29.7■■■□□ 2.35
CCDC90B-201ENST00000260054 CECR2Q9BXF3 1484 aa29.05■■■□□ 2.24
CCDC90B-201ENST00000260054 EIF4G1Q04637 1599 aaKnown RBP28.91■■■□□ 2.22
CCDC90B-201ENST00000260054 BAZ1AQ9NRL2 1556 aaPredicted RBP28.86■■■□□ 2.21
CCDC90B-201ENST00000260054 SMARCA4P51532 1647 aa28.82■■■□□ 2.2
CCDC90B-201ENST00000260054 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
CCDC90B-201ENST00000260054 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
CCDC90B-201ENST00000260054 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
CCDC90B-201ENST00000260054 DNAJC5BQ9UF47 199 aa28.54■■■□□ 2.16
CCDC90B-201ENST00000260054 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
CCDC90B-201ENST00000260054 PEG3Q9GZU2 1588 aa28.52■■■□□ 2.16
CCDC90B-201ENST00000260054 WIZO95785 1651 aa28.51■■■□□ 2.16
CCDC90B-201ENST00000260054 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
CCDC90B-201ENST00000260054 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
CCDC90B-201ENST00000260054 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
CCDC90B-201ENST00000260054 BAZ1BQ9UIG0 1483 aaKnown RBP28.31■■■□□ 2.12
CCDC90B-201ENST00000260054 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
CCDC90B-201ENST00000260054 TOP2AP11388 1531 aaKnown RBP28.22■■■□□ 2.11
CCDC90B-201ENST00000260054 CCDC88BA6NC98 1476 aa27.91■■■□□ 2.06
CCDC90B-201ENST00000260054 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
CCDC90B-201ENST00000260054 NESP48681 1621 aa27.59■■■□□ 2.01
CCDC90B-201ENST00000260054 CFTRP13569 1480 aa27.58■■■□□ 2.01
CCDC90B-201ENST00000260054 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
CCDC90B-201ENST00000260054 PRDM2Q13029 1718 aa27.37■■□□□ 1.97
CCDC90B-201ENST00000260054 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.97
CCDC90B-201ENST00000260054 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
CCDC90B-201ENST00000260054 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
CCDC90B-201ENST00000260054 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
CCDC90B-201ENST00000260054 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
CCDC90B-201ENST00000260054 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
CCDC90B-201ENST00000260054 MRC2Q9UBG0 1479 aa27.03■■□□□ 1.92
CCDC90B-201ENST00000260054 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.91
CCDC90B-201ENST00000260054 URB2Q14146 1524 aaKnown RBP27.01■■□□□ 1.91
CCDC90B-201ENST00000260054 THOC2Q8NI27 1593 aaKnown RBP27■■□□□ 1.91
CCDC90B-201ENST00000260054 CUX1P39880 1505 aa26.97■■□□□ 1.91
CCDC90B-201ENST00000260054 DNMBPQ6XZF7 1577 aa26.94■■□□□ 1.9
CCDC90B-201ENST00000260054 TOPBP1Q92547 1522 aa26.94■■□□□ 1.9
CCDC90B-201ENST00000260054 SYNJ1O43426 1573 aa26.93■■□□□ 1.9
CCDC90B-201ENST00000260054 WDR62O43379 1518 aa26.93■■□□□ 1.9
CCDC90B-201ENST00000260054 CHIC1Q5VXU3 224 aa26.89■■□□□ 1.9
CCDC90B-201ENST00000260054 TOP2BQ02880 1626 aa26.88■■□□□ 1.89
CCDC90B-201ENST00000260054 BIVM-ERCC5R4GMW8 1640 aa26.86■■□□□ 1.89
CCDC90B-201ENST00000260054 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
CCDC90B-201ENST00000260054 FGD5Q6ZNL6 1462 aa26.78■■□□□ 1.88
CCDC90B-201ENST00000260054 POLA1P09884 1462 aaPredicted RBP26.76■■□□□ 1.87
CCDC90B-201ENST00000260054 CUX2O14529 1486 aa26.69■■□□□ 1.86
CCDC90B-201ENST00000260054 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
CCDC90B-201ENST00000260054 SOGA1O94964 1423 aa26.64■■□□□ 1.86
CCDC90B-201ENST00000260054 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
CCDC90B-201ENST00000260054 TARBP1Q13395 1621 aaKnown RBP26.59■■□□□ 1.85
CCDC90B-201ENST00000260054 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
CCDC90B-201ENST00000260054 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
CCDC90B-201ENST00000260054 ZNF608Q9ULD9 1512 aaPredicted RBP26.47■■□□□ 1.83
CCDC90B-201ENST00000260054 TDRD9Q8NDG6 1382 aaKnown RBP26.45■■□□□ 1.83
CCDC90B-201ENST00000260054 AQRO60306 1485 aaKnown RBP eCLIP26.4■■□□□ 1.82
CCDC90B-201ENST00000260054 RUSC2Q8N2Y8 1516 aa26.4■■□□□ 1.82
CCDC90B-201ENST00000260054 KIF27Q86VH2 1401 aa26.38■■□□□ 1.81
CCDC90B-201ENST00000260054 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
CCDC90B-201ENST00000260054 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
CCDC90B-201ENST00000260054 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
CCDC90B-201ENST00000260054 FAM9AQ8IZU1 332 aaPredicted RBP26.28■■□□□ 1.8
CCDC90B-201ENST00000260054 EEA1Q15075 1411 aa26.26■■□□□ 1.79
CCDC90B-201ENST00000260054 GRIN2BQ13224 1484 aa26.25■■□□□ 1.79
CCDC90B-201ENST00000260054 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
CCDC90B-201ENST00000260054 IGF1RP08069 1367 aa26.23■■□□□ 1.79
CCDC90B-201ENST00000260054 ERICH3Q5RHP9 1530 aa26.21■■□□□ 1.79
CCDC90B-201ENST00000260054 CSRNP3Q8WYN3 585 aa26.18■■□□□ 1.78
CCDC90B-201ENST00000260054 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
CCDC90B-201ENST00000260054 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
CCDC90B-201ENST00000260054 ADAMTS12P58397 1594 aa26.08■■□□□ 1.77
CCDC90B-201ENST00000260054 CUL7Q14999 1698 aa26.08■■□□□ 1.77
CCDC90B-201ENST00000260054 CARMIL1Q5VZK9 1371 aa26.07■■□□□ 1.76
CCDC90B-201ENST00000260054 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
CCDC90B-201ENST00000260054 PRXQ9BXM0 1461 aa26.06■■□□□ 1.76
CCDC90B-201ENST00000260054 SYNJ2O15056 1496 aa26.01■■□□□ 1.75
CCDC90B-201ENST00000260054 RAPGEF2Q9Y4G8 1499 aa25.98■■□□□ 1.75
CCDC90B-201ENST00000260054 KIF21BO75037 1637 aa25.96■■□□□ 1.75
CCDC90B-201ENST00000260054 FBLN2P98095 1184 aa25.96■■□□□ 1.75
CCDC90B-201ENST00000260054 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
CCDC90B-201ENST00000260054 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
CCDC90B-201ENST00000260054 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
CCDC90B-201ENST00000260054 CHD1O14646 1710 aa25.9■■□□□ 1.74
CCDC90B-201ENST00000260054 GOLGA3Q08378 1498 aa25.87■■□□□ 1.73
CCDC90B-201ENST00000260054 LOC105371045A0A1W2PR82 267 aa25.82■■□□□ 1.72
CCDC90B-201ENST00000260054 NUP160Q12769 1436 aa25.79■■□□□ 1.72
CCDC90B-201ENST00000260054 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
CCDC90B-201ENST00000260054 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms