RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
CCDC90B-216ENST00000529856 CCDC180Q9P1Z9 1646 aa27.3■■□□□ 1.96
CCDC90B-216ENST00000529856 ABCC9O60706 1549 aa26.73■■□□□ 1.87
CCDC90B-216ENST00000529856 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
CCDC90B-216ENST00000529856 RB1CC1Q8TDY2 1594 aa25.71■■□□□ 1.71
CCDC90B-216ENST00000529856 NACADO15069 1562 aa25.69■■□□□ 1.7
CCDC90B-216ENST00000529856 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
CCDC90B-216ENST00000529856 MYO15BQ96JP2 1530 aa25.55■■□□□ 1.68
CCDC90B-216ENST00000529856 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
CCDC90B-216ENST00000529856 UNC13AQ9UPW8 1703 aa25.12■■□□□ 1.61
CCDC90B-216ENST00000529856 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
CCDC90B-216ENST00000529856 BICRAQ9NZM4 1560 aa24.94■■□□□ 1.58
CCDC90B-216ENST00000529856 SCRIBQ14160 1630 aa24.91■■□□□ 1.58
CCDC90B-216ENST00000529856 AEBP2Q6ZN18 517 aaPredicted RBP24.72■■□□□ 1.55
CCDC90B-216ENST00000529856 SHROOM4Q9ULL8 1493 aa24.66■■□□□ 1.54
CCDC90B-216ENST00000529856 DNAJC5BQ9UF47 199 aa24.59■■□□□ 1.53
CCDC90B-216ENST00000529856 EIF4G1Q04637 1599 aaKnown RBP24.27■■□□□ 1.48
CCDC90B-216ENST00000529856 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
CCDC90B-216ENST00000529856 CECR2Q9BXF3 1484 aa24.02■■□□□ 1.44
CCDC90B-216ENST00000529856 SMARCA4P51532 1647 aa23.84■■□□□ 1.41
CCDC90B-216ENST00000529856 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
CCDC90B-216ENST00000529856 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
CCDC90B-216ENST00000529856 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
CCDC90B-216ENST00000529856 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
CCDC90B-216ENST00000529856 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
CCDC90B-216ENST00000529856 PEG3Q9GZU2 1588 aa23.62■■□□□ 1.37
CCDC90B-216ENST00000529856 HMGXB3Q12766 1538 aa23.58■■□□□ 1.36
CCDC90B-216ENST00000529856 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
CCDC90B-216ENST00000529856 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
CCDC90B-216ENST00000529856 WIZO95785 1651 aa23.44■■□□□ 1.34
CCDC90B-216ENST00000529856 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
CCDC90B-216ENST00000529856 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
CCDC90B-216ENST00000529856 NESP48681 1621 aa23.14■■□□□ 1.29
CCDC90B-216ENST00000529856 LAMC3Q9Y6N6 1575 aa23.07■■□□□ 1.28
CCDC90B-216ENST00000529856 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
CCDC90B-216ENST00000529856 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
CCDC90B-216ENST00000529856 CCDC88BA6NC98 1476 aa22.94■■□□□ 1.26
CCDC90B-216ENST00000529856 PDS5BQ9NTI5 1447 aa22.94■■□□□ 1.26
CCDC90B-216ENST00000529856 CFTRP13569 1480 aa22.89■■□□□ 1.25
CCDC90B-216ENST00000529856 SUPT5HO00267 1087 aaKnown RBP22.87■■□□□ 1.25
CCDC90B-216ENST00000529856 KIF21AQ7Z4S6 1674 aa22.84■■□□□ 1.25
CCDC90B-216ENST00000529856 CUX2O14529 1486 aa22.79■■□□□ 1.24
CCDC90B-216ENST00000529856 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
CCDC90B-216ENST00000529856 FANCD2Q9BXW9 1451 aa22.75■■□□□ 1.23
CCDC90B-216ENST00000529856 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
CCDC90B-216ENST00000529856 MRC2Q9UBG0 1479 aa22.68■■□□□ 1.22
CCDC90B-216ENST00000529856 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
CCDC90B-216ENST00000529856 WDR62O43379 1518 aa22.6■■□□□ 1.21
CCDC90B-216ENST00000529856 URB2Q14146 1524 aaKnown RBP22.53■■□□□ 1.2
CCDC90B-216ENST00000529856 ABCC8Q09428 1581 aa22.41■■□□□ 1.18
CCDC90B-216ENST00000529856 TOPBP1Q92547 1522 aa22.4■■□□□ 1.18
CCDC90B-216ENST00000529856 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
CCDC90B-216ENST00000529856 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
CCDC90B-216ENST00000529856 CUX1P39880 1505 aa22.22■■□□□ 1.15
CCDC90B-216ENST00000529856 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
CCDC90B-216ENST00000529856 ZNF608Q9ULD9 1512 aaPredicted RBP22.15■■□□□ 1.14
CCDC90B-216ENST00000529856 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
CCDC90B-216ENST00000529856 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
CCDC90B-216ENST00000529856 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
CCDC90B-216ENST00000529856 SOGA1O94964 1423 aa22.14■■□□□ 1.13
CCDC90B-216ENST00000529856 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
CCDC90B-216ENST00000529856 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.13
CCDC90B-216ENST00000529856 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
CCDC90B-216ENST00000529856 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
CCDC90B-216ENST00000529856 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
CCDC90B-216ENST00000529856 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.12
CCDC90B-216ENST00000529856 SYNJ1O43426 1573 aa22.02■■□□□ 1.12
CCDC90B-216ENST00000529856 TDRD9Q8NDG6 1382 aaKnown RBP22■■□□□ 1.11
CCDC90B-216ENST00000529856 WDR97A6NE52 1622 aa21.95■■□□□ 1.1
CCDC90B-216ENST00000529856 ABCA10Q8WWZ4 1543 aa21.94■■□□□ 1.1
CCDC90B-216ENST00000529856 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
CCDC90B-216ENST00000529856 GAPVD1Q14C86 1478 aa21.86■■□□□ 1.09
CCDC90B-216ENST00000529856 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
CCDC90B-216ENST00000529856 ABCA5Q8WWZ7 1642 aa21.83■■□□□ 1.08
CCDC90B-216ENST00000529856 SNAPC4Q5SXM2 1469 aa21.81■■□□□ 1.08
CCDC90B-216ENST00000529856 MAGI1Q96QZ7 1491 aaPredicted RBP21.79■■□□□ 1.08
CCDC90B-216ENST00000529856 PBRM1Q86U86 1689 aa21.79■■□□□ 1.08
CCDC90B-216ENST00000529856 FBLN2P98095 1184 aa21.77■■□□□ 1.08
CCDC90B-216ENST00000529856 CHD1O14646 1710 aa21.76■■□□□ 1.07
CCDC90B-216ENST00000529856 CHMP7Q8WUX9 453 aaPredicted RBP21.73■■□□□ 1.07
CCDC90B-216ENST00000529856 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
CCDC90B-216ENST00000529856 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
CCDC90B-216ENST00000529856 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
CCDC90B-216ENST00000529856 FHAD1B1AJZ9 1412 aa21.62■■□□□ 1.05
CCDC90B-216ENST00000529856 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
CCDC90B-216ENST00000529856 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
CCDC90B-216ENST00000529856 IGF1RP08069 1367 aa21.58■■□□□ 1.04
CCDC90B-216ENST00000529856 GRIN2AQ12879 1464 aa21.57■■□□□ 1.04
CCDC90B-216ENST00000529856 CLASP1Q7Z460 1538 aa21.54■■□□□ 1.04
CCDC90B-216ENST00000529856 RIMBP3CA6NJZ7 1639 aa21.49■■□□□ 1.03
CCDC90B-216ENST00000529856 RIMBP3BA6NNM3 1639 aa21.49■■□□□ 1.03
CCDC90B-216ENST00000529856 RIMBP3Q9UFD9 1639 aa21.49■■□□□ 1.03
CCDC90B-216ENST00000529856 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
CCDC90B-216ENST00000529856 NUP160Q12769 1436 aa21.48■■□□□ 1.03
CCDC90B-216ENST00000529856 CUL7Q14999 1698 aa21.46■■□□□ 1.03
CCDC90B-216ENST00000529856 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
CCDC90B-216ENST00000529856 CEP170Q5SW79 1584 aa21.45■■□□□ 1.02
CCDC90B-216ENST00000529856 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
CCDC90B-216ENST00000529856 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1.01
CCDC90B-216ENST00000529856 ARAP1Q96P48 1450 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms