Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA9Q9Y5H5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA9Q9Y5H5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHA9Q9Y5H5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA9Q9Y5H5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PCDHA9Q9Y5H5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA9Q9Y5H5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA9Q9Y5H5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA9Q9Y5H5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHA9Q9Y5H5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA9Q9Y5H5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA9Q9Y5H5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA9Q9Y5H5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PCDHA9Q9Y5H5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PCDHA9Q9Y5H5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA9Q9Y5H5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA9Q9Y5H5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA9Q9Y5H5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.36■■□□□ 1.49
PCDHA9Q9Y5H5 LINC01003-201ENST00000564834 1764 ntBASIC24.36■■□□□ 1.49
PCDHA9Q9Y5H5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA9Q9Y5H5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA9Q9Y5H5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHA9Q9Y5H5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PCDHA9Q9Y5H5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA9Q9Y5H5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.35■■□□□ 1.49
PCDHA9Q9Y5H5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHA9Q9Y5H5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA9Q9Y5H5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA9Q9Y5H5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA9Q9Y5H5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA9Q9Y5H5 RPS2P35-201ENST00000443417 897 ntBASIC24.34■■□□□ 1.49
PCDHA9Q9Y5H5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHA9Q9Y5H5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHA9Q9Y5H5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDHA9Q9Y5H5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA9Q9Y5H5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PCDHA9Q9Y5H5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
PCDHA9Q9Y5H5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHA9Q9Y5H5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA9Q9Y5H5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA9Q9Y5H5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA9Q9Y5H5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA9Q9Y5H5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA9Q9Y5H5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHA9Q9Y5H5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHA9Q9Y5H5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PCDHA9Q9Y5H5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA9Q9Y5H5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHA9Q9Y5H5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
PCDHA9Q9Y5H5 LINC00273-201ENST00000539813 1452 ntBASIC24.29■■□□□ 1.48
PCDHA9Q9Y5H5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA9Q9Y5H5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHA9Q9Y5H5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA9Q9Y5H5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA9Q9Y5H5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA9Q9Y5H5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PCDHA9Q9Y5H5 AC135983.2-203ENST00000454486 1613 ntBASIC24.28■■□□□ 1.48
PCDHA9Q9Y5H5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA9Q9Y5H5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA9Q9Y5H5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
PCDHA9Q9Y5H5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.27■■□□□ 1.48
PCDHA9Q9Y5H5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA9Q9Y5H5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
PCDHA9Q9Y5H5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
PCDHA9Q9Y5H5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA9Q9Y5H5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA9Q9Y5H5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHA9Q9Y5H5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
PCDHA9Q9Y5H5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHA9Q9Y5H5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PCDHA9Q9Y5H5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA9Q9Y5H5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA9Q9Y5H5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA9Q9Y5H5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PCDHA9Q9Y5H5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA9Q9Y5H5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA9Q9Y5H5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.23■■□□□ 1.47
PCDHA9Q9Y5H5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA9Q9Y5H5 WHAMMP2-203ENST00000563942 1603 ntBASIC24.23■■□□□ 1.47
PCDHA9Q9Y5H5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA9Q9Y5H5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA9Q9Y5H5 AC100797.4-201ENST00000631653 1827 ntBASIC24.22■■□□□ 1.47
PCDHA9Q9Y5H5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHA9Q9Y5H5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA9Q9Y5H5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA9Q9Y5H5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA9Q9Y5H5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA9Q9Y5H5 AC135731.1-201ENST00000569415 2548 ntBASIC24.21■■□□□ 1.47
PCDHA9Q9Y5H5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHA9Q9Y5H5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA9Q9Y5H5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms