RNA–Protein interactions for RNA: ENST00000443417.1

RPS2P35-201, Transcript of ribosomal protein S2 pseudogene 35, humanhuman

BASIC

Gene RPS2P35, Length 897 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS2P35-201ENST00000443417 NISCHQ9Y2I1 1504 aa67.72■■■■■ 8.43
RPS2P35-201ENST00000443417 ABCC9O60706 1549 aa61.28■■■■■ 7.4
RPS2P35-201ENST00000443417 CCDC180Q9P1Z9 1646 aa60.82■■■■■ 7.33
RPS2P35-201ENST00000443417 RB1CC1Q8TDY2 1594 aa58.08■■■■■ 6.89
RPS2P35-201ENST00000443417 DNAJC5BQ9UF47 199 aa57.83■■■■■ 6.85
RPS2P35-201ENST00000443417 NACADO15069 1562 aa57.6■■■■■ 6.81
RPS2P35-201ENST00000443417 DCAF8L2P0C7V8 631 aa57.47■■■■■ 6.79
RPS2P35-201ENST00000443417 PABPN1Q86U42 306 aaKnown RBP eCLIP57.08■■■■■ 6.73
RPS2P35-201ENST00000443417 UNC13AQ9UPW8 1703 aa56.82■■■■■ 6.69
RPS2P35-201ENST00000443417 MYO15BQ96JP2 1530 aa56.64■■■■■ 6.66
RPS2P35-201ENST00000443417 BICRAQ9NZM4 1560 aa56.46■■■■■ 6.63
RPS2P35-201ENST00000443417 ZCCHC6Q5VYS8 1495 aaKnown RBP56.03■■■■■ 6.56
RPS2P35-201ENST00000443417 DCAF1Q9Y4B6 1507 aa55.82■■■■■ 6.53
RPS2P35-201ENST00000443417 SCRIBQ14160 1630 aa55.53■■■■■ 6.48
RPS2P35-201ENST00000443417 SHROOM4Q9ULL8 1493 aa55.51■■■■■ 6.48
RPS2P35-201ENST00000443417 CC2D2AQ9P2K1 1620 aa55.29■■■■■ 6.44
RPS2P35-201ENST00000443417 CECR2Q9BXF3 1484 aa55.2■■■■■ 6.43
RPS2P35-201ENST00000443417 EIF4G1Q04637 1599 aaKnown RBP55.08■■■■■ 6.41
RPS2P35-201ENST00000443417 DNAJC5Q9H3Z4 198 aa53.26■■■■■ 6.12
RPS2P35-201ENST00000443417 NCAPD3P42695 1498 aa53.21■■■■■ 6.11
RPS2P35-201ENST00000443417 ATAD2BQ9ULI0 1458 aa53.03■■■■■ 6.08
RPS2P35-201ENST00000443417 ERCC6Q03468 1493 aa52.9■■■■■ 6.06
RPS2P35-201ENST00000443417 SMARCA4P51532 1647 aa52.88■■■■■ 6.06
RPS2P35-201ENST00000443417 CUX2O14529 1486 aa52.83■■■■■ 6.05
RPS2P35-201ENST00000443417 SMARCA2P51531 1590 aa52.82■■■■■ 6.05
RPS2P35-201ENST00000443417 HMGXB3Q12766 1538 aa52.74■■■■■ 6.03
RPS2P35-201ENST00000443417 NESP48681 1621 aa52.57■■■■■ 6.01
RPS2P35-201ENST00000443417 BAZ1AQ9NRL2 1556 aaPredicted RBP52.55■■■■■ 6
RPS2P35-201ENST00000443417 BAZ1BQ9UIG0 1483 aaKnown RBP52.5■■■■■ 5.99
RPS2P35-201ENST00000443417 PEG3Q9GZU2 1588 aa52.31■■■■■ 5.96
RPS2P35-201ENST00000443417 MROH2BQ7Z745 1585 aa52.22■■■■■ 5.95
RPS2P35-201ENST00000443417 LAMC3Q9Y6N6 1575 aa52.03■■■■■ 5.92
RPS2P35-201ENST00000443417 THOC2Q8NI27 1593 aaKnown RBP52■■■■■ 5.92
RPS2P35-201ENST00000443417 KIF21AQ7Z4S6 1674 aa51.83■■■■■ 5.89
RPS2P35-201ENST00000443417 PDS5BQ9NTI5 1447 aa51.78■■■■■ 5.88
RPS2P35-201ENST00000443417 CADPSQ9ULU8 1353 aa51.61■■■■■ 5.85
RPS2P35-201ENST00000443417 WIZO95785 1651 aa51.59■■■■■ 5.85
RPS2P35-201ENST00000443417 MRC2Q9UBG0 1479 aa51.35■■■■■ 5.81
RPS2P35-201ENST00000443417 WDR62O43379 1518 aa51.22■■■■■ 5.79
RPS2P35-201ENST00000443417 CEP164Q9UPV0 1460 aa51.09■■■■■ 5.77
RPS2P35-201ENST00000443417 FANCD2Q9BXW9 1451 aa51.03■■■■■ 5.76
RPS2P35-201ENST00000443417 RSF1Q96T23 1441 aaPredicted RBP51.03■■■■■ 5.76
RPS2P35-201ENST00000443417 CFTRP13569 1480 aa50.94■■■■■ 5.75
RPS2P35-201ENST00000443417 TRIM41Q8WV44 630 aa50.88■■■■■ 5.74
RPS2P35-201ENST00000443417 TOP2AP11388 1531 aaKnown RBP50.85■■■■■ 5.73
RPS2P35-201ENST00000443417 URB2Q14146 1524 aaKnown RBP50.65■■■■■ 5.7
RPS2P35-201ENST00000443417 OSCARQ8IYS5 282 aa50.47■■■■■ 5.67
RPS2P35-201ENST00000443417 PRDM2Q13029 1718 aa50.35■■■■■ 5.65
RPS2P35-201ENST00000443417 CCDC88BA6NC98 1476 aa50.33■■■■■ 5.65
RPS2P35-201ENST00000443417 ZNF608Q9ULD9 1512 aaPredicted RBP50.11■■■■■ 5.61
RPS2P35-201ENST00000443417 IFT140Q96RY7 1462 aa50.08■■■■■ 5.61
RPS2P35-201ENST00000443417 TOPBP1Q92547 1522 aa50.03■■■■■ 5.6
RPS2P35-201ENST00000443417 ABCC8Q09428 1581 aa49.83■■■■■ 5.57
RPS2P35-201ENST00000443417 RIMBP3CA6NJZ7 1639 aa49.82■■■■■ 5.57
RPS2P35-201ENST00000443417 RIMBP3BA6NNM3 1639 aa49.82■■■■■ 5.57
RPS2P35-201ENST00000443417 RIMBP3Q9UFD9 1639 aa49.82■■■■■ 5.57
RPS2P35-201ENST00000443417 DNMBPQ6XZF7 1577 aa49.79■■■■■ 5.56
RPS2P35-201ENST00000443417 EIF4G3O43432 1585 aaKnown RBP49.75■■■■■ 5.55
RPS2P35-201ENST00000443417 AQRO60306 1485 aaKnown RBP eCLIP49.63■■■■■ 5.53
RPS2P35-201ENST00000443417 ARHGEF11O15085 1522 aa49.62■■■■■ 5.53
RPS2P35-201ENST00000443417 TARBP1Q13395 1621 aaKnown RBP49.59■■■■■ 5.53
RPS2P35-201ENST00000443417 POLA1P09884 1462 aaPredicted RBP49.5■■■■■ 5.51
RPS2P35-201ENST00000443417 CHD1O14646 1710 aa49.46■■■■■ 5.51
RPS2P35-201ENST00000443417 FBLN2P98095 1184 aa49.41■■■■■ 5.5
RPS2P35-201ENST00000443417 RAD54L2Q9Y4B4 1467 aa49.38■■■■■ 5.5
RPS2P35-201ENST00000443417 CYB5RLQ6IPT4 315 aa49.37■■■■■ 5.49
RPS2P35-201ENST00000443417 SOGA1O94964 1423 aa49.29■■■■■ 5.48
RPS2P35-201ENST00000443417 TDRD9Q8NDG6 1382 aaKnown RBP49.28■■■■■ 5.48
RPS2P35-201ENST00000443417 FGD5Q6ZNL6 1462 aa49.16■■■■■ 5.46
RPS2P35-201ENST00000443417 ARAP1Q96P48 1450 aa49.12■■■■■ 5.45
RPS2P35-201ENST00000443417 CUX1P39880 1505 aa49.07■■■■■ 5.45
RPS2P35-201ENST00000443417 SNAPC4Q5SXM2 1469 aa49.06■■■■■ 5.44
RPS2P35-201ENST00000443417 WDR97A6NE52 1622 aa48.96■■■■■ 5.43
RPS2P35-201ENST00000443417 CHMP7Q8WUX9 453 aaPredicted RBP48.94■■■■■ 5.43
RPS2P35-201ENST00000443417 TRHP20396 242 aaPredicted RBP48.92■■■■■ 5.42
RPS2P35-201ENST00000443417 MAGI1Q96QZ7 1491 aaPredicted RBP48.86■■■■■ 5.41
RPS2P35-201ENST00000443417 GRIN2BQ13224 1484 aa48.86■■■■■ 5.41
RPS2P35-201ENST00000443417 CLASP1Q7Z460 1538 aa48.85■■■■■ 5.41
RPS2P35-201ENST00000443417 SYNJ1O43426 1573 aa48.78■■■■■ 5.4
RPS2P35-201ENST00000443417 SYNJ2O15056 1496 aa48.74■■■■■ 5.39
RPS2P35-201ENST00000443417 SUPT5HO00267 1087 aaKnown RBP48.67■■■■■ 5.38
RPS2P35-201ENST00000443417 GAPVD1Q14C86 1478 aa48.67■■■■■ 5.38
RPS2P35-201ENST00000443417 PBRM1Q86U86 1689 aa48.64■■■■■ 5.38
RPS2P35-201ENST00000443417 ABCA10Q8WWZ4 1543 aa48.54■■■■■ 5.36
RPS2P35-201ENST00000443417 ABCA5Q8WWZ7 1642 aa48.49■■■■■ 5.35
RPS2P35-201ENST00000443417 WRNQ14191 1432 aaPredicted RBP eCLIP48.31■■■■■ 5.32
RPS2P35-201ENST00000443417 GRIN2AQ12879 1464 aa48.23■■■■■ 5.31
RPS2P35-201ENST00000443417 ADAMTS12P58397 1594 aa48.16■■■■■ 5.3
RPS2P35-201ENST00000443417 ERCC6L2Q5T890 1561 aa48.16■■■■■ 5.3
RPS2P35-201ENST00000443417 TOP2BQ02880 1626 aa48.15■■■■■ 5.3
RPS2P35-201ENST00000443417 BIVM-ERCC5R4GMW8 1640 aa48.14■■■■■ 5.3
RPS2P35-201ENST00000443417 CEP170Q5SW79 1584 aa48.1■■■■■ 5.29
RPS2P35-201ENST00000443417 NUP160Q12769 1436 aa48.07■■■■■ 5.29
RPS2P35-201ENST00000443417 FHAD1B1AJZ9 1412 aa48.02■■■■■ 5.28
RPS2P35-201ENST00000443417 ERICH3Q5RHP9 1530 aa47.91■■■■■ 5.26
RPS2P35-201ENST00000443417 SHROOM2Q13796 1616 aa47.88■■■■■ 5.25
RPS2P35-201ENST00000443417 PRG4Q92954 1404 aaPredicted RBP47.7■■■■■ 5.23
RPS2P35-201ENST00000443417 AEBP2Q6ZN18 517 aaPredicted RBP47.69■■■■■ 5.22
RPS2P35-201ENST00000443417 JPH4Q96JJ6 628 aa47.65■■■■■ 5.22
RPS2P35-201ENST00000443417 RUSC2Q8N2Y8 1516 aa47.48■■■■■ 5.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms