Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 SNHG4-206ENST00000508735 310 ntTSL 1 (best)11.03□□□□□ -0.642e-15■■■■■ 31.3
NCBP2P52298 SNHG4-202ENST00000505522 629 ntTSL 1 (best)11.03□□□□□ -0.642e-15■■■■■ 31.3
NCBP2P52298 SNHG4-207ENST00000513259 444 ntTSL 57.85□□□□□ -1.152e-15■■■■■ 31.3
NCBP2P52298 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.162e-15■■■■■ 31.3
NCBP2P52298 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.74□□□□□ -1.172e-15■■■■■ 31.3
NCBP2P52298 RBBP6-207ENST00000564314 3361 ntTSL 27.51□□□□□ -1.211e-14■■■■■ 31.3
NCBP2P52298 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.21□□□□□ -1.582e-15■■■■■ 31.3
NCBP2P52298 RBBP6-209ENST00000567686 1138 ntTSL 54.65□□□□□ -1.671e-14■■■■■ 31.3
NCBP2P52298 SNHG4-205ENST00000507692 575 ntTSL 54.63□□□□□ -1.672e-15■■■■■ 31.3
NCBP2P52298 SLF1-206ENST00000504099 578 ntTSL 46.57□□□□□ -1.363e-9■■■■■ 31.3
NCBP2P52298 SLF1-208ENST00000508383 328 ntTSL 36.57□□□□□ -1.363e-9■■■■■ 31.3
NCBP2P52298 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.373e-9■■■■■ 31.3
NCBP2P52298 SLF1-207ENST00000508130 1079 ntTSL 23.15□□□□□ -1.913e-9■■■■■ 31.3
NCBP2P52298 PAPD4-211ENST00000508620 483 ntTSL 415.02■□□□□ -02e-9■■■■■ 31.2
NCBP2P52298 PAPD4-215ENST00000514095 575 ntTSL 413.44□□□□□ -0.262e-9■■■■■ 31.2
NCBP2P52298 PAPD4-205ENST00000502269 705 ntTSL 312.87□□□□□ -0.352e-9■■■■■ 31.2
NCBP2P52298 PAPD4-217ENST00000515807 576 ntTSL 411.26□□□□□ -0.612e-9■■■■■ 31.2
NCBP2P52298 PAPD4-207ENST00000504233 2997 ntTSL 1 (best) BASIC10.65□□□□□ -0.72e-9■■■■■ 31.2
NCBP2P52298 PAPD4-201ENST00000296783 3129 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.822e-9■■■■■ 31.2
NCBP2P52298 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.112e-9■■■■■ 31.2
NCBP2P52298 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.122e-9■■■■■ 31.2
NCBP2P52298 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.512e-9■■■■■ 31.2
NCBP2P52298 PAPD4-209ENST00000505571 781 ntTSL 32.34□□□□□ -2.032e-9■■■■■ 31.2
NCBP2P52298 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.08□□□□□ -0.322e-11■■■■■ 31
NCBP2P52298 RC3H2-208ENST00000478216 547 ntTSL 312.67□□□□□ -0.382e-11■■■■■ 31
NCBP2P52298 RC3H2-202ENST00000357244 3991 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.72e-11■■■■■ 31
NCBP2P52298 TRIM16-216ENST00000579535 567 ntTSL 511.76□□□□□ -0.531e-6■■■■■ 30.9
NCBP2P52298 TRIM16-225ENST00000584142 565 ntTSL 410.11□□□□□ -0.791e-6■■■■■ 30.9
NCBP2P52298 TRIM16-221ENST00000581200 486 ntTSL 49.7□□□□□ -0.861e-6■■■■■ 30.9
NCBP2P52298 TRIM16-224ENST00000582708 521 ntTSL 59.46□□□□□ -0.91e-6■■■■■ 30.9
NCBP2P52298 TRIM16-222ENST00000581224 815 ntTSL 39.39□□□□□ -0.911e-6■■■■■ 30.9
NCBP2P52298 TRIM16-215ENST00000579272 568 ntTSL 49.39□□□□□ -0.911e-6■■■■■ 30.9
NCBP2P52298 TRIM16-217ENST00000579630 550 ntTSL 49.3□□□□□ -0.921e-6■■■■■ 30.9
NCBP2P52298 TRIM16-220ENST00000580388 516 ntTSL 58.64□□□□□ -1.031e-6■■■■■ 30.9
NCBP2P52298 TRIM16-203ENST00000460728 793 ntTSL 58.64□□□□□ -1.031e-6■■■■■ 30.9
NCBP2P52298 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.2□□□□□ -1.11e-6■■■■■ 30.9
NCBP2P52298 TRIM16-205ENST00000473540 760 ntTSL 58.03□□□□□ -1.121e-6■■■■■ 30.9
NCBP2P52298 TRIM16-206ENST00000473659 559 ntTSL 38□□□□□ -1.131e-6■■■■■ 30.9
NCBP2P52298 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.221e-6■■■■■ 30.9
NCBP2P52298 TRIM16-218ENST00000579843 459 ntTSL 45.57□□□□□ -1.521e-6■■■■■ 30.9
NCBP2P52298 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.94■□□□□ 0.141e-8■■■■■ 30.9
NCBP2P52298 TTC32-203ENST00000431392 779 ntTSL 313.96□□□□□ -0.179e-9■■■■■ 30.9
NCBP2P52298 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC11.63□□□□□ -0.551e-8■■■■■ 30.9
NCBP2P52298 TTC32-202ENST00000402414 735 ntTSL 5 BASIC11.15□□□□□ -0.629e-9■■■■■ 30.9
NCBP2P52298 AP4S1-203ENST00000334725 1122 ntTSL 1 (best) BASIC11.01□□□□□ -0.651e-8■■■■■ 30.9
NCBP2P52298 AP4S1-201ENST00000216366 2256 ntTSL 1 (best) BASIC10.64□□□□□ -0.711e-8■■■■■ 30.9
NCBP2P52298 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC8.54□□□□□ -1.041e-8■■■■■ 30.9
NCBP2P52298 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.079e-9■■■■■ 30.9
NCBP2P52298 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.11e-8■■■■■ 30.9
NCBP2P52298 AP4S1-208ENST00000556232 542 ntTSL 48.13□□□□□ -1.111e-8■■■■■ 30.9
NCBP2P52298 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.571e-8■■■■■ 30.9
NCBP2P52298 AP4S1-210ENST00000557346 663 ntTSL 32.2□□□□□ -2.061e-8■■■■■ 30.9
NCBP2P52298 SNF8-208ENST00000510195 445 ntTSL 224.22■■□□□ 1.475e-10■■■■■ 30.9
NCBP2P52298 SNF8-213ENST00000514929 775 ntTSL 522.43■■□□□ 1.185e-10■■■■■ 30.9
NCBP2P52298 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.065e-10■■■■■ 30.9
NCBP2P52298 SNF8-217ENST00000576353 700 ntTSL 521.66■■□□□ 1.065e-10■■■■■ 30.9
NCBP2P52298 SNF8-209ENST00000510558 1051 ntTSL 520.97■□□□□ 0.955e-10■■■■■ 30.9
NCBP2P52298 SNF8-216ENST00000573795 583 ntTSL 519.78■□□□□ 0.765e-10■■■■■ 30.9
NCBP2P52298 SNF8-201ENST00000290330 951 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.885e-10■■■■■ 30.9
NCBP2P52298 INSIG2-202ENST00000411929 574 ntTSL 214.01□□□□□ -0.171e-15■■■■■ 30.9
NCBP2P52298 INSIG2-206ENST00000485520 3185 ntTSL 510.15□□□□□ -0.781e-15■■■■■ 30.9
NCBP2P52298 INSIG2-204ENST00000471186 2100 ntTSL 58.38□□□□□ -1.071e-15■■■■■ 30.9
NCBP2P52298 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.21e-15■■■■■ 30.9
NCBP2P52298 ABHD16A-214ENST00000495769 1892 ntTSL 518.6■□□□□ 0.574e-7■■■■■ 30.7
NCBP2P52298 ABHD16A-216ENST00000498420 1137 ntTSL 518.54■□□□□ 0.564e-7■■■■■ 30.7
NCBP2P52298 ABHD16A-209ENST00000477462 582 ntTSL 316.16■□□□□ 0.184e-7■■■■■ 30.7
NCBP2P52298 ABHD16A-210ENST00000482224 864 ntTSL 215.99■□□□□ 0.154e-7■■■■■ 30.7
NCBP2P52298 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.084e-7■■■■■ 30.7
NCBP2P52298 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.274e-7■■■■■ 30.7
NCBP2P52298 PAXIP1-204ENST00000457196 3990 ntTSL 520.04■□□□□ 0.88e-7■■■■■ 30.7
NCBP2P52298 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.638e-7■■■■■ 30.7
NCBP2P52298 PAXIP1-201ENST00000397192 3711 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.818e-7■■■■■ 30.7
NCBP2P52298 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.472e-6■■■■■ 30.7
NCBP2P52298 TMEM9-211ENST00000497582 1075 ntTSL 320.48■□□□□ 0.872e-6■■■■■ 30.7
NCBP2P52298 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.522e-6■■■■■ 30.7
NCBP2P52298 TMEM9-206ENST00000435310 507 ntTSL 214.28□□□□□ -0.122e-6■■■■■ 30.7
NCBP2P52298 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.242e-6■■■■■ 30.7
NCBP2P52298 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.352e-6■■■■■ 30.7
NCBP2P52298 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.382e-6■■■■■ 30.7
NCBP2P52298 TMEM9-205ENST00000414605 545 ntTSL 210.05□□□□□ -0.82e-6■■■■■ 30.7
NCBP2P52298 TOB2-202ENST00000434408 777 ntTSL 219.04■□□□□ 0.648e-7■■■■■ 30.6
NCBP2P52298 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.048e-7■■■■■ 30.6
NCBP2P52298 SGPL1-204ENST00000486993 537 ntTSL 1 (best)18.96■□□□□ 0.632e-17■■■■■ 30.4
NCBP2P52298 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.692e-17■■■■■ 30.4
NCBP2P52298 AKT2-203ENST00000391844 1795 ntTSL 1 (best)22.79■■□□□ 1.241e-10■■■■■ 30.3
NCBP2P52298 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.85■□□□□ 0.931e-10■■■■■ 30.3
NCBP2P52298 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.911e-10■■■■■ 30.3
NCBP2P52298 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.26■□□□□ 0.831e-10■■■■■ 30.3
NCBP2P52298 AKT2-240ENST00000584288 1706 ntTSL 218.53■□□□□ 0.561e-10■■■■■ 30.3
NCBP2P52298 AKT2-229ENST00000578123 564 ntTSL 49.7□□□□□ -0.861e-10■■■■■ 30.3
NCBP2P52298 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.38■□□□□ 0.852e-11■■■■■ 30.2
NCBP2P52298 AP006621.3-201ENST00000526588 291 ntTSL 218.84■□□□□ 0.612e-11■■■■■ 30.2
NCBP2P52298 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.65■□□□□ 0.12e-11■■■■■ 30.2
NCBP2P52298 DMXL1-203ENST00000503802 1835 ntTSL 1 (best)9.88□□□□□ -0.831e-8■■■■■ 30.2
NCBP2P52298 DMXL1-208ENST00000509902 577 ntTSL 32.23□□□□□ -2.051e-8■■■■■ 30.2
NCBP2P52298 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.51□□□□□ -0.418e-7■■■■■ 30.1
NCBP2P52298 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.51□□□□□ -0.418e-7■■■■■ 30.1
NCBP2P52298 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.51□□□□□ -0.418e-7■■■■■ 30.1
NCBP2P52298 PPIA-205ENST00000479021 552 ntTSL 49.85□□□□□ -0.838e-7■■■■■ 30.1
NCBP2P52298 PPIA-202ENST00000415933 863 ntTSL 28.18□□□□□ -1.18e-7■■■■■ 30.1
Retrieved 100 of 18,329 protein–RNA pairs in 542.2 ms