RNA–Protein interactions for RNA: ENST00000505571.5

PAPD4-209, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 3

Gene PAPD4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-209ENST00000505571 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
PAPD4-209ENST00000505571 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
PAPD4-209ENST00000505571 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
PAPD4-209ENST00000505571 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
PAPD4-209ENST00000505571 FOXD1Q16676 465 aa19.05■□□□□ 0.64
PAPD4-209ENST00000505571 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
PAPD4-209ENST00000505571 ADRA2BP18089 450 aa18.23■□□□□ 0.51
PAPD4-209ENST00000505571 PPP6R1Q9UPN7 881 aa18.21■□□□□ 0.51
PAPD4-209ENST00000505571 PIAS4Q8N2W9 510 aaPredicted RBP18■□□□□ 0.47
PAPD4-209ENST00000505571 MSH5O43196 834 aa17.68■□□□□ 0.42
PAPD4-209ENST00000505571 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
PAPD4-209ENST00000505571 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
PAPD4-209ENST00000505571 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
PAPD4-209ENST00000505571 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
PAPD4-209ENST00000505571 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
PAPD4-209ENST00000505571 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
PAPD4-209ENST00000505571 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
PAPD4-209ENST00000505571 KCNA4P22459 653 aa16.2■□□□□ 0.18
PAPD4-209ENST00000505571 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.16
PAPD4-209ENST00000505571 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
PAPD4-209ENST00000505571 HOXD11P31277 338 aaPredicted RBP15.96■□□□□ 0.15
PAPD4-209ENST00000505571 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
PAPD4-209ENST00000505571 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
PAPD4-209ENST00000505571 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
PAPD4-209ENST00000505571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
PAPD4-209ENST00000505571 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
PAPD4-209ENST00000505571 RNF39Q9H2S5 420 aa15.09■□□□□ 0.01
PAPD4-209ENST00000505571 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
PAPD4-209ENST00000505571 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
PAPD4-209ENST00000505571 C1QBPQ07021 282 aaKnown RBP14.94□□□□□ -0.02
PAPD4-209ENST00000505571 EHMT2Q96KQ7 1210 aa14.88□□□□□ -0.03
PAPD4-209ENST00000505571 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
PAPD4-209ENST00000505571 ZBTB22O15209 634 aa14.85□□□□□ -0.03
PAPD4-209ENST00000505571 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
PAPD4-209ENST00000505571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
PAPD4-209ENST00000505571 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
PAPD4-209ENST00000505571 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
PAPD4-209ENST00000505571 APLP2Q06481 763 aa14.73□□□□□ -0.05
PAPD4-209ENST00000505571 CSRNP3Q8WYN3 585 aa14.7□□□□□ -0.06
PAPD4-209ENST00000505571 CAPN15O75808 1086 aa14.61□□□□□ -0.07
PAPD4-209ENST00000505571 SPINK5Q9NQ38 1064 aaPredicted RBP14.58□□□□□ -0.08
PAPD4-209ENST00000505571 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
PAPD4-209ENST00000505571 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
PAPD4-209ENST00000505571 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
PAPD4-209ENST00000505571 ATF5Q9Y2D1 282 aaPredicted RBP14.38□□□□□ -0.11
PAPD4-209ENST00000505571 DSG3P32926 999 aa14.32□□□□□ -0.12
PAPD4-209ENST00000505571 ABCB7O75027 752 aa14.29□□□□□ -0.12
PAPD4-209ENST00000505571 POLA2Q14181 598 aa14.21□□□□□ -0.13
PAPD4-209ENST00000505571 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
PAPD4-209ENST00000505571 FBLN2P98095 1184 aa13.92□□□□□ -0.18
PAPD4-209ENST00000505571 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
PAPD4-209ENST00000505571 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
PAPD4-209ENST00000505571 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
PAPD4-209ENST00000505571 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
PAPD4-209ENST00000505571 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
PAPD4-209ENST00000505571 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
PAPD4-209ENST00000505571 ZNF692Q9BU19 519 aaPredicted RBP13.54□□□□□ -0.24
PAPD4-209ENST00000505571 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
PAPD4-209ENST00000505571 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
PAPD4-209ENST00000505571 SSUH2Q9Y2M2 353 aa13.42□□□□□ -0.26
PAPD4-209ENST00000505571 FKBP8Q14318 412 aa13.36□□□□□ -0.27
PAPD4-209ENST00000505571 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
PAPD4-209ENST00000505571 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
PAPD4-209ENST00000505571 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
PAPD4-209ENST00000505571 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
PAPD4-209ENST00000505571 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
PAPD4-209ENST00000505571 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
PAPD4-209ENST00000505571 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
PAPD4-209ENST00000505571 PROM2Q8N271 834 aa13.12□□□□□ -0.31
PAPD4-209ENST00000505571 POTEHQ6S545 545 aa13.1□□□□□ -0.31
PAPD4-209ENST00000505571 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
PAPD4-209ENST00000505571 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
PAPD4-209ENST00000505571 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
PAPD4-209ENST00000505571 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
PAPD4-209ENST00000505571 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
PAPD4-209ENST00000505571 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
PAPD4-209ENST00000505571 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
PAPD4-209ENST00000505571 MIER1Q8N108 512 aa12.83□□□□□ -0.36
PAPD4-209ENST00000505571 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
PAPD4-209ENST00000505571 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
PAPD4-209ENST00000505571 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
PAPD4-209ENST00000505571 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
PAPD4-209ENST00000505571 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
PAPD4-209ENST00000505571 ZBTB47Q9UFB7 747 aaPredicted RBP12.67□□□□□ -0.38
PAPD4-209ENST00000505571 HAX1O00165 279 aa12.64□□□□□ -0.39
PAPD4-209ENST00000505571 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
PAPD4-209ENST00000505571 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
PAPD4-209ENST00000505571 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
PAPD4-209ENST00000505571 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
PAPD4-209ENST00000505571 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
PAPD4-209ENST00000505571 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
PAPD4-209ENST00000505571 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
PAPD4-209ENST00000505571 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
PAPD4-209ENST00000505571 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
PAPD4-209ENST00000505571 NUBP1P53384 320 aa12.42□□□□□ -0.42
PAPD4-209ENST00000505571 EVX2Q03828 476 aa12.41□□□□□ -0.42
PAPD4-209ENST00000505571 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
PAPD4-209ENST00000505571 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
PAPD4-209ENST00000505571 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
PAPD4-209ENST00000505571 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms