RNA–Protein interactions for RNA: ENST00000508383.1

SLF1-208, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 3

Gene SLF1, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-208ENST00000508383 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
SLF1-208ENST00000508383 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
SLF1-208ENST00000508383 NISCHQ9Y2I1 1504 aa18.68■□□□□ 0.58
SLF1-208ENST00000508383 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
SLF1-208ENST00000508383 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
SLF1-208ENST00000508383 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
SLF1-208ENST00000508383 ABCC9O60706 1549 aa16.88■□□□□ 0.29
SLF1-208ENST00000508383 FOXD1Q16676 465 aa16.75■□□□□ 0.27
SLF1-208ENST00000508383 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
SLF1-208ENST00000508383 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
SLF1-208ENST00000508383 MSH5O43196 834 aa16.02■□□□□ 0.16
SLF1-208ENST00000508383 NACADO15069 1562 aa15.92■□□□□ 0.14
SLF1-208ENST00000508383 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
SLF1-208ENST00000508383 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
SLF1-208ENST00000508383 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.11
SLF1-208ENST00000508383 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
SLF1-208ENST00000508383 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
SLF1-208ENST00000508383 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
SLF1-208ENST00000508383 PIAS4Q8N2W9 510 aaPredicted RBP15.59■□□□□ 0.09
SLF1-208ENST00000508383 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
SLF1-208ENST00000508383 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
SLF1-208ENST00000508383 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
SLF1-208ENST00000508383 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
SLF1-208ENST00000508383 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
SLF1-208ENST00000508383 CC2D2AQ9P2K1 1620 aa15.29■□□□□ 0.04
SLF1-208ENST00000508383 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
SLF1-208ENST00000508383 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
SLF1-208ENST00000508383 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
SLF1-208ENST00000508383 ADRA2BP18089 450 aa15.19■□□□□ 0.02
SLF1-208ENST00000508383 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
SLF1-208ENST00000508383 SMARCA4P51532 1647 aa14.64□□□□□ -0.07
SLF1-208ENST00000508383 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
SLF1-208ENST00000508383 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
SLF1-208ENST00000508383 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
SLF1-208ENST00000508383 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
SLF1-208ENST00000508383 CUX2O14529 1486 aa14.59□□□□□ -0.07
SLF1-208ENST00000508383 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
SLF1-208ENST00000508383 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.08
SLF1-208ENST00000508383 NESP48681 1621 aa14.49□□□□□ -0.09
SLF1-208ENST00000508383 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
SLF1-208ENST00000508383 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
SLF1-208ENST00000508383 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
SLF1-208ENST00000508383 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
SLF1-208ENST00000508383 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
SLF1-208ENST00000508383 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
SLF1-208ENST00000508383 WIZO95785 1651 aa14.27□□□□□ -0.12
SLF1-208ENST00000508383 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
SLF1-208ENST00000508383 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
SLF1-208ENST00000508383 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
SLF1-208ENST00000508383 WDR62O43379 1518 aa14.17□□□□□ -0.14
SLF1-208ENST00000508383 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
SLF1-208ENST00000508383 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
SLF1-208ENST00000508383 CEP164Q9UPV0 1460 aa14.11□□□□□ -0.15
SLF1-208ENST00000508383 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
SLF1-208ENST00000508383 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
SLF1-208ENST00000508383 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
SLF1-208ENST00000508383 CFTRP13569 1480 aa14.04□□□□□ -0.16
SLF1-208ENST00000508383 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
SLF1-208ENST00000508383 RSF1Q96T23 1441 aaPredicted RBP14.03□□□□□ -0.16
SLF1-208ENST00000508383 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
SLF1-208ENST00000508383 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
SLF1-208ENST00000508383 CACNB1Q02641 598 aaPredicted RBP13.87□□□□□ -0.19
SLF1-208ENST00000508383 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
SLF1-208ENST00000508383 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
SLF1-208ENST00000508383 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
SLF1-208ENST00000508383 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
SLF1-208ENST00000508383 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
SLF1-208ENST00000508383 RIMBP3CA6NJZ7 1639 aa13.8□□□□□ -0.2
SLF1-208ENST00000508383 RIMBP3BA6NNM3 1639 aa13.8□□□□□ -0.2
SLF1-208ENST00000508383 RIMBP3Q9UFD9 1639 aa13.8□□□□□ -0.2
SLF1-208ENST00000508383 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
SLF1-208ENST00000508383 DNMBPQ6XZF7 1577 aa13.77□□□□□ -0.21
SLF1-208ENST00000508383 CHD1O14646 1710 aa13.75□□□□□ -0.21
SLF1-208ENST00000508383 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
SLF1-208ENST00000508383 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
SLF1-208ENST00000508383 ARHGEF11O15085 1522 aa13.71□□□□□ -0.21
SLF1-208ENST00000508383 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
SLF1-208ENST00000508383 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.22
SLF1-208ENST00000508383 RAD54L2Q9Y4B4 1467 aa13.59□□□□□ -0.23
SLF1-208ENST00000508383 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
SLF1-208ENST00000508383 FGD5Q6ZNL6 1462 aa13.56□□□□□ -0.24
SLF1-208ENST00000508383 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
SLF1-208ENST00000508383 ARAP1Q96P48 1450 aa13.55□□□□□ -0.24
SLF1-208ENST00000508383 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
SLF1-208ENST00000508383 SOGA1O94964 1423 aa13.55□□□□□ -0.24
SLF1-208ENST00000508383 CUX1P39880 1505 aa13.54□□□□□ -0.24
SLF1-208ENST00000508383 FBLN2P98095 1184 aa13.54□□□□□ -0.24
SLF1-208ENST00000508383 RNF39Q9H2S5 420 aa13.54□□□□□ -0.24
SLF1-208ENST00000508383 SNAPC4Q5SXM2 1469 aa13.54□□□□□ -0.24
SLF1-208ENST00000508383 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
SLF1-208ENST00000508383 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
SLF1-208ENST00000508383 CYB5RLQ6IPT4 315 aa13.52□□□□□ -0.25
SLF1-208ENST00000508383 CLASP1Q7Z460 1538 aa13.52□□□□□ -0.25
SLF1-208ENST00000508383 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
SLF1-208ENST00000508383 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
SLF1-208ENST00000508383 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
SLF1-208ENST00000508383 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
SLF1-208ENST00000508383 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
SLF1-208ENST00000508383 ABCA5Q8WWZ7 1642 aa13.44□□□□□ -0.26
SLF1-208ENST00000508383 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms