RNA–Protein interactions for RNA: ENST00000578237.5

TRIM16-212, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM16, Length 3,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-212ENST00000578237 NISCHQ9Y2I1 1504 aa16.31■□□□□ 0.2
TRIM16-212ENST00000578237 SHROOM4Q9ULL8 1493 aa14.28□□□□□ -0.12
TRIM16-212ENST00000578237 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
TRIM16-212ENST00000578237 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
TRIM16-212ENST00000578237 DCAF8L2P0C7V8 631 aa13.79□□□□□ -0.2
TRIM16-212ENST00000578237 ZCCHC6Q5VYS8 1495 aaKnown RBP13.79□□□□□ -0.2
TRIM16-212ENST00000578237 ABCC9O60706 1549 aa13.71□□□□□ -0.21
TRIM16-212ENST00000578237 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
TRIM16-212ENST00000578237 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
TRIM16-212ENST00000578237 DCAF1Q9Y4B6 1507 aa13.4□□□□□ -0.26
TRIM16-212ENST00000578237 NACADO15069 1562 aa13.3□□□□□ -0.28
TRIM16-212ENST00000578237 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
TRIM16-212ENST00000578237 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
TRIM16-212ENST00000578237 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
TRIM16-212ENST00000578237 SCRIBQ14160 1630 aa13.15□□□□□ -0.3
TRIM16-212ENST00000578237 PPARGC1BQ86YN6 1023 aaKnown RBP13.11□□□□□ -0.31
TRIM16-212ENST00000578237 HRCP23327 699 aa13.1□□□□□ -0.31
TRIM16-212ENST00000578237 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
TRIM16-212ENST00000578237 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
TRIM16-212ENST00000578237 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
TRIM16-212ENST00000578237 FAM9AQ8IZU1 332 aaPredicted RBP12.96□□□□□ -0.34
TRIM16-212ENST00000578237 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
TRIM16-212ENST00000578237 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.34
TRIM16-212ENST00000578237 BICRAQ9NZM4 1560 aa12.89□□□□□ -0.35
TRIM16-212ENST00000578237 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
TRIM16-212ENST00000578237 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
TRIM16-212ENST00000578237 WIZO95785 1651 aa12.77□□□□□ -0.37
TRIM16-212ENST00000578237 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
TRIM16-212ENST00000578237 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
TRIM16-212ENST00000578237 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
TRIM16-212ENST00000578237 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
TRIM16-212ENST00000578237 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
TRIM16-212ENST00000578237 ABCC8Q09428 1581 aa12.55□□□□□ -0.4
TRIM16-212ENST00000578237 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.41
TRIM16-212ENST00000578237 CCDC88BA6NC98 1476 aa12.48□□□□□ -0.41
TRIM16-212ENST00000578237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
TRIM16-212ENST00000578237 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
TRIM16-212ENST00000578237 SOGA1O94964 1423 aa12.42□□□□□ -0.42
TRIM16-212ENST00000578237 SMARCA2P51531 1590 aa12.4□□□□□ -0.42
TRIM16-212ENST00000578237 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.43
TRIM16-212ENST00000578237 TOP2AP11388 1531 aaKnown RBP12.39□□□□□ -0.43
TRIM16-212ENST00000578237 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
TRIM16-212ENST00000578237 SCAF1Q9H7N4 1312 aaKnown RBP12.38□□□□□ -0.43
TRIM16-212ENST00000578237 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
TRIM16-212ENST00000578237 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
TRIM16-212ENST00000578237 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
TRIM16-212ENST00000578237 ZEB1P37275 1124 aaPredicted RBP12.3□□□□□ -0.44
TRIM16-212ENST00000578237 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
TRIM16-212ENST00000578237 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
TRIM16-212ENST00000578237 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
TRIM16-212ENST00000578237 UBTFP17480 764 aaKnown RBP12.25□□□□□ -0.45
TRIM16-212ENST00000578237 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
TRIM16-212ENST00000578237 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
TRIM16-212ENST00000578237 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
TRIM16-212ENST00000578237 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
TRIM16-212ENST00000578237 MYT1Q01538 1121 aa12.19□□□□□ -0.46
TRIM16-212ENST00000578237 TNIKQ9UKE5 1360 aa12.16□□□□□ -0.46
TRIM16-212ENST00000578237 WRNQ14191 1432 aaPredicted RBP eCLIP12.16□□□□□ -0.46
TRIM16-212ENST00000578237 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
TRIM16-212ENST00000578237 GOLGA3Q08378 1498 aa12.08□□□□□ -0.47
TRIM16-212ENST00000578237 RAPGEF2Q9Y4G8 1499 aa12.07□□□□□ -0.48
TRIM16-212ENST00000578237 NEUROD1Q13562 356 aa12.07□□□□□ -0.48
TRIM16-212ENST00000578237 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
TRIM16-212ENST00000578237 EEA1Q15075 1411 aa12.02□□□□□ -0.49
TRIM16-212ENST00000578237 CLIP1P30622 1438 aa12.01□□□□□ -0.49
TRIM16-212ENST00000578237 NESP48681 1621 aa12□□□□□ -0.49
TRIM16-212ENST00000578237 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
TRIM16-212ENST00000578237 CADPSQ9ULU8 1353 aa11.99□□□□□ -0.49
TRIM16-212ENST00000578237 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
TRIM16-212ENST00000578237 CFTRP13569 1480 aa11.98□□□□□ -0.49
TRIM16-212ENST00000578237 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
TRIM16-212ENST00000578237 KIF21BO75037 1637 aa11.97□□□□□ -0.49
TRIM16-212ENST00000578237 YTHDC1Q96MU7 727 aaKnown RBP11.94□□□□□ -0.5
TRIM16-212ENST00000578237 KANK4Q5T7N3 995 aaPredicted RBP11.93□□□□□ -0.5
TRIM16-212ENST00000578237 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
TRIM16-212ENST00000578237 TOP2BQ02880 1626 aa11.91□□□□□ -0.5
TRIM16-212ENST00000578237 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
TRIM16-212ENST00000578237 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.51
TRIM16-212ENST00000578237 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
TRIM16-212ENST00000578237 CUX1P39880 1505 aa11.89□□□□□ -0.51
TRIM16-212ENST00000578237 MIER1Q8N108 512 aa11.88□□□□□ -0.51
TRIM16-212ENST00000578237 ARAP1Q96P48 1450 aa11.87□□□□□ -0.51
TRIM16-212ENST00000578237 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
TRIM16-212ENST00000578237 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
TRIM16-212ENST00000578237 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
TRIM16-212ENST00000578237 APLP2Q06481 763 aa11.84□□□□□ -0.51
TRIM16-212ENST00000578237 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.52
TRIM16-212ENST00000578237 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
TRIM16-212ENST00000578237 PDS5BQ9NTI5 1447 aa11.81□□□□□ -0.52
TRIM16-212ENST00000578237 ITGAEP38570 1179 aa11.81□□□□□ -0.52
TRIM16-212ENST00000578237 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
TRIM16-212ENST00000578237 ARHGAP35Q9NRY4 1499 aa11.75□□□□□ -0.53
TRIM16-212ENST00000578237 P3H3Q8IVL6 736 aa11.74□□□□□ -0.53
TRIM16-212ENST00000578237 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
TRIM16-212ENST00000578237 ERCC6Q03468 1493 aa11.74□□□□□ -0.53
TRIM16-212ENST00000578237 ERICH3Q5RHP9 1530 aa11.73□□□□□ -0.53
TRIM16-212ENST00000578237 KIF27Q86VH2 1401 aa11.72□□□□□ -0.53
TRIM16-212ENST00000578237 TOPBP1Q92547 1522 aa11.71□□□□□ -0.53
TRIM16-212ENST00000578237 CUX2O14529 1486 aa11.7□□□□□ -0.54
TRIM16-212ENST00000578237 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms