RNA–Protein interactions for RNA: ENST00000367334.9

TMEM9-204, Transcript of transmembrane protein 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM9-204ENST00000367334 NISCHQ9Y2I1 1504 aa35.4■■■■□ 3.26
TMEM9-204ENST00000367334 CCDC180Q9P1Z9 1646 aa31.49■■■□□ 2.63
TMEM9-204ENST00000367334 ABCC9O60706 1549 aa30.74■■■□□ 2.51
TMEM9-204ENST00000367334 RB1CC1Q8TDY2 1594 aa29.62■■■□□ 2.33
TMEM9-204ENST00000367334 DCAF8L2P0C7V8 631 aa29.61■■■□□ 2.33
TMEM9-204ENST00000367334 NACADO15069 1562 aa29.59■■■□□ 2.33
TMEM9-204ENST00000367334 ZCCHC6Q5VYS8 1495 aaKnown RBP29.49■■■□□ 2.31
TMEM9-204ENST00000367334 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
TMEM9-204ENST00000367334 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
TMEM9-204ENST00000367334 UNC13AQ9UPW8 1703 aa28.95■■■□□ 2.23
TMEM9-204ENST00000367334 PABPN1Q86U42 306 aaKnown RBP eCLIP28.73■■■□□ 2.19
TMEM9-204ENST00000367334 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
TMEM9-204ENST00000367334 BICRAQ9NZM4 1560 aa28.68■■■□□ 2.18
TMEM9-204ENST00000367334 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
TMEM9-204ENST00000367334 DNAJC5BQ9UF47 199 aa28.15■■■□□ 2.1
TMEM9-204ENST00000367334 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
TMEM9-204ENST00000367334 CC2D2AQ9P2K1 1620 aa27.83■■■□□ 2.05
TMEM9-204ENST00000367334 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
TMEM9-204ENST00000367334 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
TMEM9-204ENST00000367334 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
TMEM9-204ENST00000367334 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
TMEM9-204ENST00000367334 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
TMEM9-204ENST00000367334 NCAPD3P42695 1498 aa27.28■■□□□ 1.96
TMEM9-204ENST00000367334 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
TMEM9-204ENST00000367334 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
TMEM9-204ENST00000367334 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
TMEM9-204ENST00000367334 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
TMEM9-204ENST00000367334 WIZO95785 1651 aa27■■□□□ 1.91
TMEM9-204ENST00000367334 RSF1Q96T23 1441 aaPredicted RBP26.98■■□□□ 1.91
TMEM9-204ENST00000367334 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
TMEM9-204ENST00000367334 NESP48681 1621 aa26.61■■□□□ 1.85
TMEM9-204ENST00000367334 LAMC3Q9Y6N6 1575 aa26.59■■□□□ 1.85
TMEM9-204ENST00000367334 ERCC6Q03468 1493 aa26.53■■□□□ 1.84
TMEM9-204ENST00000367334 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
TMEM9-204ENST00000367334 PDS5BQ9NTI5 1447 aa26.41■■□□□ 1.82
TMEM9-204ENST00000367334 CCDC88BA6NC98 1476 aa26.39■■□□□ 1.82
TMEM9-204ENST00000367334 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
TMEM9-204ENST00000367334 CFTRP13569 1480 aa26.34■■□□□ 1.81
TMEM9-204ENST00000367334 KIF21AQ7Z4S6 1674 aa26.32■■□□□ 1.8
TMEM9-204ENST00000367334 CUX2O14529 1486 aa26.23■■□□□ 1.79
TMEM9-204ENST00000367334 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
TMEM9-204ENST00000367334 FANCD2Q9BXW9 1451 aa26.2■■□□□ 1.78
TMEM9-204ENST00000367334 PRDM2Q13029 1718 aa26.2■■□□□ 1.78
TMEM9-204ENST00000367334 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
TMEM9-204ENST00000367334 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
TMEM9-204ENST00000367334 WDR62O43379 1518 aa26.02■■□□□ 1.76
TMEM9-204ENST00000367334 URB2Q14146 1524 aaKnown RBP25.91■■□□□ 1.74
TMEM9-204ENST00000367334 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
TMEM9-204ENST00000367334 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
TMEM9-204ENST00000367334 DNMBPQ6XZF7 1577 aa25.76■■□□□ 1.71
TMEM9-204ENST00000367334 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
TMEM9-204ENST00000367334 CUX1P39880 1505 aa25.58■■□□□ 1.69
TMEM9-204ENST00000367334 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
TMEM9-204ENST00000367334 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
TMEM9-204ENST00000367334 TARBP1Q13395 1621 aaKnown RBP25.49■■□□□ 1.67
TMEM9-204ENST00000367334 SOGA1O94964 1423 aa25.47■■□□□ 1.67
TMEM9-204ENST00000367334 ZNF608Q9ULD9 1512 aaPredicted RBP25.46■■□□□ 1.67
TMEM9-204ENST00000367334 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
TMEM9-204ENST00000367334 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
TMEM9-204ENST00000367334 TOP2BQ02880 1626 aa25.4■■□□□ 1.66
TMEM9-204ENST00000367334 BIVM-ERCC5R4GMW8 1640 aa25.4■■□□□ 1.66
TMEM9-204ENST00000367334 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.66
TMEM9-204ENST00000367334 SYNJ1O43426 1573 aa25.37■■□□□ 1.65
TMEM9-204ENST00000367334 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
TMEM9-204ENST00000367334 AQRO60306 1485 aaKnown RBP eCLIP25.35■■□□□ 1.654e-7■■■■■ 33.7
TMEM9-204ENST00000367334 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
TMEM9-204ENST00000367334 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
TMEM9-204ENST00000367334 ABCA10Q8WWZ4 1543 aa25.26■■□□□ 1.63
TMEM9-204ENST00000367334 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
TMEM9-204ENST00000367334 OSCARQ8IYS5 282 aa25.17■■□□□ 1.62
TMEM9-204ENST00000367334 GRIN2BQ13224 1484 aa25.16■■□□□ 1.62
TMEM9-204ENST00000367334 ABCA5Q8WWZ7 1642 aa25.16■■□□□ 1.62
TMEM9-204ENST00000367334 PBRM1Q86U86 1689 aa25.14■■□□□ 1.61
TMEM9-204ENST00000367334 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
TMEM9-204ENST00000367334 MAGI1Q96QZ7 1491 aaPredicted RBP25.11■■□□□ 1.61
TMEM9-204ENST00000367334 CHD1O14646 1710 aa25.09■■□□□ 1.61
TMEM9-204ENST00000367334 FBLN2P98095 1184 aa25.07■■□□□ 1.6
TMEM9-204ENST00000367334 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
TMEM9-204ENST00000367334 SYNJ2O15056 1496 aa25■■□□□ 1.59
TMEM9-204ENST00000367334 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
TMEM9-204ENST00000367334 KIF27Q86VH2 1401 aa24.93■■□□□ 1.58
TMEM9-204ENST00000367334 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
TMEM9-204ENST00000367334 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
TMEM9-204ENST00000367334 FHAD1B1AJZ9 1412 aa24.89■■□□□ 1.57
TMEM9-204ENST00000367334 GRIN2AQ12879 1464 aa24.84■■□□□ 1.57
TMEM9-204ENST00000367334 IGF1RP08069 1367 aa24.8■■□□□ 1.56
TMEM9-204ENST00000367334 CLASP1Q7Z460 1538 aa24.78■■□□□ 1.56
TMEM9-204ENST00000367334 CUL7Q14999 1698 aa24.77■■□□□ 1.56
TMEM9-204ENST00000367334 RIMBP3CA6NJZ7 1639 aa24.73■■□□□ 1.55
TMEM9-204ENST00000367334 RIMBP3BA6NNM3 1639 aa24.73■■□□□ 1.55
TMEM9-204ENST00000367334 RIMBP3Q9UFD9 1639 aa24.73■■□□□ 1.55
TMEM9-204ENST00000367334 ARHGEF11O15085 1522 aa24.72■■□□□ 1.55
TMEM9-204ENST00000367334 NUP160Q12769 1436 aa24.72■■□□□ 1.55
TMEM9-204ENST00000367334 CEP170Q5SW79 1584 aa24.7■■□□□ 1.55
TMEM9-204ENST00000367334 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
TMEM9-204ENST00000367334 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
TMEM9-204ENST00000367334 CHIC1Q5VXU3 224 aa24.6■■□□□ 1.53
TMEM9-204ENST00000367334 RAPGEF2Q9Y4G8 1499 aa24.54■■□□□ 1.52
TMEM9-204ENST00000367334 SHROOM2Q13796 1616 aa24.53■■□□□ 1.52
TMEM9-204ENST00000367334 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms